FC929935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_AERPE (Glutamate dehydrogenase OS=Aeropyrum pernix GN=gdhA PE=3 SV=2) HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50 Identity = 104/232 (44.83%), Postives = 142/232 (61.21%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+RYHP V +EV AL+ MTWK ++A +PYGG KGG+ NP LS ELE L+R + + I D++G+ D+PAPD+ T PQ M+W LDEY++ G VVTGKP++LGG R +TG GV +T + + G+ +QG+GNVG +AA+ + E G KIVAVSD G I + +GID LK + V + G I + IL D+L+PAA+ VI Sbjct: 67 PYKGGVRYHPNVTMNEVIALSMWMTWKNSLAGLPYGGGKGGVRVNPKILSPRELELLSRKYFESISDIVGVDQDIPAPDVYTDPQVMSWFLDEYNRVKRGQFFGVVTGKPVELGGLNARIVSTGYGVAVSTRVAAEKFLGGLEGRTVAVQGYGNVGYYAAKFLAEMGAKIVAVSDSRGGIYDPEGIDPEEALKVKRSTGTVANYQRGKKISTMEILELPVDILVPAAIEEVI 298
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_PYRHO (Glutamate dehydrogenase OS=Pyrococcus horikoshii GN=gdhA PE=3 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.424e-50 Identity = 108/238 (45.38%), Postives = 146/238 (61.34%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG-KNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGGIR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + ++D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR+ AT RG + G + G+ IQG+GN G + A+++ E G K+VAVSD G I N G++ +LK +EH VK F G +I + +L D DVL PAA+ VI + Sbjct: 67 PTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAVYDIISPYEDIPAPDVYTNPQIMAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVLGWDGLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDGLNADEVLKWKREHGSVKDFPGATNISNEELLELDVDVLAPAAIEEVITK 304
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE42_HALSA (NADP-specific glutamate dehydrogenase B OS=Halobacterium salinarium GN=gdhB PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 4.144e-50 Identity = 103/232 (44.40%), Postives = 143/232 (61.64%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHS-PAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVI 694 P KGG+RYHP V +E L+ MTWK AV ++P+GGAKGG+ +P LS E ERLTR F ++ D +G D+PAPDMGT QTMAW +D YS G + P VVTGKP GGS GR A GR V AT +N + I +QG+G+VG+ AA L+ + G ++VAVSD++G + ++ G+D ++ H + V +++ + +L D DV+IPAA+G VI Sbjct: 81 PYKGGLRYHPGVSAEECVGLSMWMTWKCAVMDLPFGGAKGGVVVDPKTLSADEHERLTRRFAAELRDEVGPSQDIPAPDMGTDAQTMAWFMDAYSMQQGETVPGVVTGKPPVAGGSHGRAEAPGRSVAIATREAINYYDIPIDDATVAVQGYGSVGANAALLLDDWGARVVAVSDVNGGVLDTDGLDTHAIPSHGNQPAAVMRHDAPNTLTNEELLELDVDVVIPAAVGNVI 312
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_PYRAB (Glutamate dehydrogenase OS=Pyrococcus abyssi GN=gdhA PE=3 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 4.144e-50 Identity = 108/238 (45.38%), Postives = 147/238 (61.76%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG-KNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGGIR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + I+D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR+ AT RG + G ++ G+ IQG+GN G + A+++ E G K+VAVSD G I N G++ +LK +EH VK F G +I + +L + DVL PAA+ VI + Sbjct: 67 PTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYETIARRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREAAKVLGWDDLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDGLNADEVLKWKREHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITK 304
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: GUDB_BACSU (NAD-specific glutamate dehydrogenase OS=Bacillus subtilis GN=gudB PE=1 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 5.412e-50 Identity = 100/231 (43.29%), Postives = 145/231 (62.77%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTW---KTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAAL 682 P KGGIR+HP V EV A+ L W K + ++PYGG KGGI C+P D+S ELERL+R + + I ++G DVPAPD+ T Q MAW++DEYS+ +SP +TGKP+ LGGS GR++AT +GV + + G +I G R V+QGFGN GS+ A+ + + G K+V +SD G + + +G+D+ LL ++ G D+I + +L DCD+L+PAA+ Sbjct: 78 PTKGGIRFHPNVTEKEVKAVKALSIWMSLKCGIIDLPYGGGKGGIVCDPRDMSFRELERLSRGYVRAISQIVGPTKDVPAPDVFTNSQIMAWMMDEYSRIDEFNSPGFITGKPLVLGGSHGRESATAKGVTICIKEAAKKRGIDIKGARVVVQGFGNAGSYLAKFMHDAGAKVVGISDAYGGLYDPEGLDIDYLLDR-RDSFGTVTKLFNDTITNQELLELDCDILVPAAI 307
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_SYNY3 (NADP-specific glutamate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=gdhA PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 7.068e-50 Identity = 106/243 (43.62%), Postives = 145/243 (59.67%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGH-SPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKG---------FSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGG+RYHP V DEV +LA MT+K A+ N+P+GGAKGGI NP +LS +ELERL+R + + I D IG D+ APD+ T M W++D+YS SPAVVTGKP+ +GGS GR+ ATG G + + +L + + +QGFGN G A + + G K+VA+SD G I N +GID+P+++ + + HR + G I + +L D DVLIPAAL I R Sbjct: 66 PGKGGVRYHPNVTMDEVQSLAFWMTFKCALLNLPFGGAKGGITLNPKELSRAELERLSRGYIEAIADFIGPDIDILAPDVYTNEMMMGWMMDQYSIIRRKISPAVVTGKPVTMGGSQGRNTATGTGAFYIMQGMLPKFDQYPENTTVAVQGFGNAGMVVAECLYQDGYKVVAISDSQGGIYNEQGIDIPAVIDYKQRHRTLAGMYCDQAICDLGENQQISNAELLALDVDVLIPAALENQITR 308
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_PYREN (Glutamate dehydrogenase OS=Pyrococcus endeavori GN=gdhA PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.231e-50 Identity = 108/238 (45.38%), Postives = 147/238 (61.76%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG-KNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGGIR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + I+D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR+ AT RG + G ++ G+ IQG+GN G + A+++ E G K+VAVSD G I N G++ +LK +EH VK F G +I + +L + DVL PAA+ VI + Sbjct: 67 PTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYEAISRRKTPAFGIITGKPLSIGGSLGRNEATARGASYTIREARKVLGWGDLKGKTIAIQGYGNAGYYLAKIMSEDYGMKVVAVSDSKGGIYNPDGLNADEVLKWKQEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITK 304
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_PYRFU (Glutamate dehydrogenase OS=Pyrococcus furiosus GN=gdhA PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.686e-49 Identity = 108/238 (45.38%), Postives = 144/238 (60.50%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKF-HGHSPA--VVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG-KNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGGIR+HPE V ALA MTWKTAV ++PYGG KGGI +P LS E ERL R + + I+D+I + D+PAPD+ T PQ MAW++DEY +PA ++TGKP+ +GGSLGR AT RG + G + G+ IQG+GN G + A+++ E G K+VAVSD G I N G++ +LK EH VK F G +I + +L + DVL PAA+ VI + Sbjct: 67 PTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGIIVDPKKLSDREKERLARGYIRAIYDVISPYEDIPAPDVYTNPQIMAWMMDEYETISRRKTPAFGIITGKPLSIGGSLGRIEATARGASYTIREAAKVLGWDTLKGKTIAIQGYGNAGYYLAKIMSEDFGMKVVAVSDSKGGIYNPDGLNADEVLKWKNEHGSVKDFPGATNITNEELLELEVDVLAPAAIEEVITK 304
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_THELI (Glutamate dehydrogenase OS=Thermococcus litoralis GN=gdhA PE=1 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 4.581e-49 Identity = 103/237 (43.46%), Postives = 144/237 (60.76%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEY---SKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEK-GGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGGIR+HPE V ALA MTWKTAV ++PYGG KGG+ CNP ++S E ERL R + + I+D+I + D+PAPD+ T PQ MAW++DEY S+ S V+TGKP +GG + R AT RG + G ++ G+ IQG+GN G + A+++ E+ G K+VAVSD G I N G++ +L K+ VK F G +I + +L + DVL P+A+ VI + Sbjct: 67 PTKGGIRWHPEETLSTVKALAAWMTWKTAVMDLPYGGGKGGVICNPKEMSDREKERLARGYVRAIYDVISPYTDIPAPDVYTNPQIMAWMMDEYETISRRKDPSFGVITGKPPSVGGIVARMDATARGASYTVREAAKALGMDLKGKTIAIQGYGNAGYYMAKIMSEEYGMKVVAVSDTKGGIYNPDGLNADEVLAWKKKTGSVKDFPGATNITNEELLELEVDVLAPSAIEEVITK 303
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_CLODI (NAD-specific glutamate dehydrogenase OS=Clostridium difficile GN=gluD PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.065e-48 Identity = 106/239 (44.35%), Postives = 141/239 (59.00%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSP-AVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAV-----SDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSIDSNSILIEDCDVLIPAALGGVINR 700 P KGGIR+H V DEV AL+ MT+K +V IPYGG KGGI +P LS ELERL+R + I+ LIG DVPAPD+ T Q M+W++DEY+K G S V+TGKP++ GGSLGR AATG GV + G ++ + +QG GNVGS+ + GG +VA+ S+ S AI N G+D ++L ++KEH + F G I D D++IPAAL I + Sbjct: 69 PTKGGIRFHQNVSRDEVKALSIWMTFKCSVTGIPYGGGKGGIIVDPSTLSQGELERLSRGYIDGIYKLIGEKVDVPAPDVNTNGQIMSWMVDEYNKLTGQSSIGVITGKPVEFGGSLGRTAATGFGVAVTAREAAAKLGIDMKKAKIAVQGIGNVGSYTVLNCEKLGGTVVAMAEWCKSEGSYAIYNENGLDGQAMLDYMKEHGNLLNFPGAKRISLEEFWASDVDIVIPAALENSITK 307 The following BLAST results are available for this feature:
BLAST of FC929935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC929935 ID=FC929935; Name=FC929935; organism=Citrus clementina; type=EST; length=702bpback to top |