FC929935
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_ECOLI (NADP-specific glutamate dehydrogenase OS=Escherichia coli (strain K12) GN=gdhA PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.413e-28 Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVK 586 P KGG+R+HP V+ + L T+K A+ +P GG KGG +P S E+ R + +++ +G DVPA D+G G + + ++ K ++ V TGK + GGSL R ATG G+++ TEA+L HG G R + G GNV +A E G +++ SD SG + + G L + ++ Sbjct: 90 PYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGADTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIE 284
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_HELPY (NADP-specific glutamate dehydrogenase OS=Helicobacter pylori GN=gdhA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 7.604e-28 Identity = 69/198 (34.85%), Postives = 104/198 (52.53%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHR 595 P KGG+R+HP V+ + L K ++ + GGAKGG +P S E+ R + F +++ IG DVPA D+G G + + ++ +Y K V+TGK + GGSL R ATG G ++ E +L E ++ G+ + G GNV + + + G K V SD +G I + GID+ LLK +KE R Sbjct: 86 PYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKGKSEHEIMRFCQAFMNELYRHIGATTDVPAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSLEGKVCSVSGSGNVAIYTIEKLLQIGAKPVTASDSNGMIYDKDGIDL-ELLKEIKEVR 282
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_SALTY (NADP-specific glutamate dehydrogenase OS=Salmonella typhimurium GN=gdhA PE=3 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27 Identity = 66/192 (34.38%), Postives = 98/192 (51.04%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLK 577 P KGG+R+HP V+ + L T+K A+ +P GG KGG +P S E+ R + +++ +G DVPA D+G G + + ++ K +S V TGK + GGSL R ATG G+++ TEA+L HG G R + G GNV +A G ++V SD SG + + G L + Sbjct: 90 PYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGPDTDVPAGDIGVGGREVGFMAGMMRKLSNNSSCVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAMAFGARVVTASDSSGTVVDESGFTPEKLAR 281
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_SALTI (NADP-specific glutamate dehydrogenase OS=Salmonella typhi GN=gdhA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.297e-27 Identity = 66/192 (34.38%), Postives = 98/192 (51.04%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLK 577 P KGG+R+HP V+ + L T+K A+ +P GG KGG +P S E+ R + +++ +G DVPA D+G G + + ++ K +S V TGK + GGSL R ATG G+++ TEA+L HG G R + G GNV +A G ++V SD SG + + G L + Sbjct: 90 PYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSEGEVMRFCQALMTELYRHLGPDTDVPAGDIGVGGREVGFMAGMMRKLSNNSACVFTGKGLSFGGSLIRPEATGYGLVYFTEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAMAFGARVVTASDSSGTVVDESGFTPEKLAR 281
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_PSYT1 (NADP-specific glutamate dehydrogenase OS=Psychrobacter sp. (strain TAD1) GN=gdhA PE=1 SV=4) HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27 Identity = 74/238 (31.09%), Postives = 121/238 (50.84%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSL--LKHVK-EHRGVKGF---SGGDSIDSNSILIEDCDVLIPAALGGVIN 697 P KGG+R+HP V+ + L +K A+ +P GG KGG +P + SE+ R F +++H + DVPA D+G G + ++++ Y S V+TGK + GGSL R ATG G ++ + +L ++I G++ ++ G GNV AA G ++ VSD G I ++KG++ + LK K +H+ + + GG+ + D+ IP+A IN Sbjct: 86 PYKGGLRFHPTVNQSVLKFLGFEQIFKNALTGLPIGGGKGGSDFDPKGKTDSEIRRFCYAFMRELHHYVNKDMDVPAGDIGVGGREVSYMFAMYKNLTRESTGVITGKGVGFGGSLMRTEATGYGAVYFLQNMLAAQNESIEGKKVLVSGAGNVSLHAAEKATLIGAIVLTVSDSKGTIYDAKGLNQEKIDWLKVQKDQHKPLADYVEVFGGEWMADQKPWSIKADIAIPSATQNEIN 323
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_GIBFU (NADP-specific glutamate dehydrogenase OS=Gibberella fujikuroi GN=GDH2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.873e-26 Identity = 66/185 (35.68%), Postives = 99/185 (53.51%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKG 553 P KGG+R+HP V+ + L +K A+ + GG KGG +P S +E+ R + F ++ IG DVPA D+G G + + ++ Y KF V+TGK + GGSL R ATG G+++ E +L + G+R + G GNV +AA I E GG +V++SD GA+ +G Sbjct: 76 PYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLNMGGGKGGADFDPKGKSDAEIRRFCQAFMTELSKHIGAETDVPAGDIGVGGREIGYLFGAYRKFANRWEGVLTGKGLSWGGSLIRPEATGYGLVYYVEYMLKHANRGTFEGKRVALSGSGNVAQYAALKIIELGGSVVSLSDSKGALVAKEG 260
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_HAEIN (NADP-specific glutamate dehydrogenase OS=Haemophilus influenzae GN=gdhA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.195e-26 Identity = 64/190 (33.68%), Postives = 98/190 (51.58%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSL 571 P KGG+R+HP V+ + L +K A+ +P GGAKGG +P S +E+ R + +++ +G DVPA D+G G + + ++ K S V TG+ + GGSL R ATG G+++ +A+L E G + AG+ + G GNV +A G K+V SD SG + + G L Sbjct: 90 PFKGGMRFHPSVNLSILKFLGFEQIFKNALTTLPMGGAKGGSDFDPKGKSDAEVMRFCQALMAELYRHVGADTDVPAGDIGVGGREVGYLAGYMKKLSNQSACVFTGRGLSFGGSLIRPEATGYGLIYFAQAMLAEKGDSFAGKVVSVSGSGNVAQYAIEKALSLGAKVVTCSDSSGYVYDPNGFTTEKL 279
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_UNKP (NADP-specific glutamate dehydrogenase OS=Unknown prokaryotic organism GN=gdhA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 64/200 (32.00%), Postives = 99/200 (49.50%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSL--LKHVKEHR 595 P KGG+R+HP V+ + L T+K A+ +P GG KGG +P S + R + +++ +G DVPA D+G G + + ++ K ++ V TGK + GGSL R ATG G+++ T+A+L HG G R + G GNV + E +++ VSD G + + G L L +K R Sbjct: 90 PYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSQGRIMRFCQALMTELYRHLGPDTDVPAGDIGDGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTDAMLQRHGLGFEGMRVAVSGSGNVAQYTIEKALELDARVITVSDSGGTLVDEDGFTTEKLAHLAEIKNQR 289
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE3_BACTN (Glutamate dehydrogenase OS=Bacteroides thetaiotaomicron GN=gdhA PE=3 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.449e-26 Identity = 76/240 (31.67%), Postives = 119/240 (49.58%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSL-----LKHVKEHRGVKGFS---GGDSIDSNSILIEDCDVLIPAALGGVIN 697 P KGGIR+H V+ + LA T+K ++ +P GG KGG +P S +E+ R + F ++ IG DVPA D+G G + + ++ Y K TGK + GGSL R ATG G ++ +L G ++ G+ ++ G GNV + + E GGK+V SD G I + GID L LK++ R ++ ++ G ++ E CD+ +P+A +N Sbjct: 86 PYKGGIRFHASVNLSILKFLAFEQTFKNSLTTLPMGGGKGGSDFSPRGKSNAEVMRFVQAFMLELWRHIGPETDVPAGDIGVGGREVGFMFGMYKKLAHEFTGTFTGKGREFGGSLIRPEATGYGNIYFLMEMLKTKGTDLKGKVCLVSGSGNVAQYTIEKVIELGGKVVTCSDSDGYIYDPDGIDREKLDYIMELKNLYRGR-IREYAEKYGCKYVEGAKPWGEKCDIALPSATQNELN 324
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_CHLSO (NADP-specific glutamate dehydrogenase (Fragment) OS=Chlorella sorokiniana PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.586e-25 Identity = 61/184 (33.15%), Postives = 101/184 (54.89%), Query Frame = 2 Query: 2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKG 553 P KGG+R+HP V+ + LA +K ++ +P GG KGG +P S +E+ R + F ++ I DVPA D+G G + + ++ +Y + + V+TGK + GGS R ATG G + E +L + G+++ G+R ++ G GNV + A L+ EKG ++++SD G + G Sbjct: 164 PYKGGLRFHPSVNLSIMKFLAFEQIFKNSLTTLPMGGGKGGSDFDPKGKSDAEVMRFCQSFMTELQRHISYVQDVPAGDIGVGAREIGYLFGQYKRITKNYTGVLTGKGQEYGGSEIRPEATGYGAVLFVENVLKDKGESLKGKRCLVSGAGNVAQYCAELLLEKGAIVLSLSDSQGYVYEPNG 347 The following BLAST results are available for this feature:
BLAST of FC929935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >FC929935 ID=FC929935; Name=FC929935; organism=Citrus clementina; type=EST; length=702bpback to top |