FC929935

Overview
NameFC929935
Unique NameFC929935
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_PORGI (NAD-specific glutamate dehydrogenase OS=Porphyromonas gingivalis GN=gdh PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24
Identity = 65/209 (31.10%), Postives = 104/209 (49.76%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSI 628
            P KGGIR+HP V+   +  L     +K A+  +P GG KGG   +P   S +E+ R  + F  ++   IG   D+PA D+G G + + ++   Y K        +TGK  + GGS  R  +TG G ++  + +  ++G +  G+   I GFGNV    A+   E G K+V +S   G + +  GI+ P   + + + R     SG D +
Sbjct:   86 PYKGGIRFHPSVNLSILKFLGFEQMFKNALTTLPMGGGKGGADFSPKGKSEAEIMRFCQSFMTELWRNIGPDTDIPAGDIGVGGREVGYMFGMYKKLAREHTGTLTGKGFEFGGSRLRPESTGFGAVYFVQNMCKQNGVDYKGKTLAISGFGNVAWGVAQKATELGIKVVTISGPDGYVYDPDGINTPEKFRCMLDLRD----SGNDVV 290          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE2_PORG3 (NAD-specific glutamate dehydrogenase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=gdh PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.290e-24
Identity = 65/209 (31.10%), Postives = 104/209 (49.76%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLLKHVKEHRGVKGFSGGDSI 628
            P KGGIR+HP V+   +  L     +K A+  +P GG KGG   +P   S +E+ R  + F  ++   IG   D+PA D+G G + + ++   Y K        +TGK  + GGS  R  +TG G ++  + +  ++G +  G+   I GFGNV    A+   E G K+V +S   G + +  GI+ P   + + + R     SG D +
Sbjct:   86 PYKGGIRFHPSVNLSILKFLGFEQMFKNALTTLPMGGGKGGADFSPKGKSEAEIMRFCQSFMTELWRNIGPDTDIPAGDIGVGGREVGYMFGMYKKLAREHTGTLTGKGFEFGGSRLRPESTGFGAVYFVQNMCKQNGVDYKGKTLAISGFGNVAWGVAQKATELGIKVVTISGPDGYVYDPDGINTPEKFRCMLDLRD----SGNDVV 290          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_DEBOC (NADP-specific glutamate dehydrogenase OS=Debaryomyces occidentalis GN=GDHA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.101e-24
Identity = 76/225 (33.78%), Postives = 112/225 (49.78%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKN----IAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKGIDVPSLL---------KHVKE--HRGVKGFSGGDSID 631
            P KGG+R+HP V+   +  L     +K A+  +  GG KGG   NP   S  E+ R    F +++   IG   DVPA D+G G + + ++   Y +   +   V+TGK +  GGSL R  ATG  V F T   + E   N      G+R  + G GNV  +AA  + E GG +V++SD  G+I +  GI    +L         K ++E     VK FSG +S++
Sbjct:   78 PYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLSMGGGKGGCDFNPKGRSDGEIRRFCVAFMRQLARYIGADTDVPAGDIGVGGREIGYLFGAYKQMQNNWYGVLTGKGLTWGGSLIRPEATGY-VSFTTLKKMIEKATNGKESFKGKRVELSGSGNVAQYAALKVIELGGIVVSLSDSKGSIVSKNGIVPEQVLEIAAAKLKFKSLEEITKESVKLFSGENSVE 301          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_EMENI (NADP-specific glutamate dehydrogenase OS=Emericella nidulans GN=gdhA PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.136e-23
Identity = 65/182 (35.71%), Postives = 97/182 (53.30%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNE--HGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAI 538
            P KGG+R+HP V+   +  L     +K A+  +  GG KGG   +P   S SE+ R    F  ++   IG   DVPA D+G   + + ++  +Y +       V+TGK    GGSL R  ATG GV++  E ++     GK + AG+R  I G GNV  +AA  + E GG +V++SD  G++
Sbjct:   76 PYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLNMGGGKGGSDFDPKGKSDSEIRRFCTAFMTELCKHIGADTDVPAGDIGVTGREVGFLFGQYRRIRNQWEGVLTGKGGSWGGSLIRPEATGYGVVYYVEHMIKHVTGGKESFAGKRVAISGSGNVAQYAALKVIELGGSVVSLSDSKGSL 257          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_PENCH (NADP-specific glutamate dehydrogenase OS=Penicillium chrysogenum GN=GDH PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23
Identity = 62/182 (34.07%), Postives = 96/182 (52.75%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHG---KNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAI 538
            P KGG+R+HP V+   +  L     +K A+  +  GG KGG   +P   + +E+ R    F  ++   IG   DVPA D+G   + + ++  +Y K       V+TGK    GGSL R  ATG GV++  E ++       ++ AG+R  I G GNV  +AA  + E GG ++++SD  GA+
Sbjct:   77 PYKGGLRFHPTVNLSILKFLGFEQIFKNALTGLNMGGGKGGSDFDPKGKTDNEIRRFCVSFMTELCKHIGADTDVPAGDIGVTGREVGFMFGQYKKIRNQWEGVLTGKGGSWGGSLIRPEATGYGVVYYVEHMIQHASGGKESFAGKRVAISGSGNVAQYAALKVIELGGSVISLSDSQGAL 258          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_SCHPO (NADP-specific glutamate dehydrogenase OS=Schizosaccharomyces pombe GN=gdh1 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22
Identity = 62/190 (32.63%), Postives = 99/190 (52.11%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGK---NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAI--KNSKGI 556
            P KGG+R+HP V+   +  L     +K A+  +P GG KGG   +P   S +E+ R ++ F +++   IG   DVPA D+G     +  +  EY +       VVTGK +  GGS  R  ATG GV++  + ++    K    + G+R  I G GNV  +AA    ++G  + ++SD  G +  K ++G+
Sbjct:   75 PYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLPMGGGKGGSDFDPKGKSDNEIRRFSQAFMRQLFRYIGPQTDVPAGDIGVTGFVVMHMFGEYKRLRNEYSGVVTGKHMLTGGSNIRPEATGYGVVYYVKHMIEHRTKGAETLKGKRVAISGSGNVAQYAALKCIQEGAIVKSISDSKGVLIAKTAEGL 264          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_HEBCY (NADP-specific glutamate dehydrogenase OS=Hebeloma cylindrosporum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.143e-22
Identity = 61/188 (32.45%), Postives = 95/188 (50.53%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALL----NEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKG 553
            P KGG+R HP V+   +  L    T+K A+  +  GG KGG   +P   S SE+ R    F  ++   IG   DVPA D+GTG + + ++   Y K       ++TGK +  GGS  R  ATG G+++  E ++     E+  +       I G GNV  + A  + E G  ++++SD  G++ + KG
Sbjct:   73 PYKGGLRLHPSVNLSILKFLGFEQTFKNALTGLSMGGGKGGSDFDPKGKSDSEIRRFCFSFMGELFRHIGSDTDVPAGDIGTGGREIGFLFGAYKKLRNEFTGMLTGKGLTWGGSFIRPEATGYGLIYFVEHMIAKACPEYSLDKPSTLVAISGSGNVAQFTALKVIELGATVLSLSDSKGSLISDKG 260          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_AGABI (NADP-specific glutamate dehydrogenase OS=Agaricus bisporus GN=gdhA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 60/188 (31.91%), Postives = 96/188 (51.06%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALL----NEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKG 553
            P KGG+R HP V+   +  L    T+K A+  +  GG KGG   +P   S +E+ R    F  ++   IG   DVPA D+GTG + + ++   Y +       ++TGK I+ GGS  R  ATG G+++  E ++     E+  +       I G GNV  + A  + E G  ++++SD  G++ + KG
Sbjct:   73 PYKGGLRLHPTVNLSILKFLGFEQTFKNALTGLSMGGGKGGSDFDPKGKSDNEIRRFCVAFMSELFRHIGQDTDVPAGDIGTGAREIGFLFGAYRRLKNEFTGMLTGKGINWGGSFIRPEATGYGLIYYVEHMIAHACPEYSLDRPSTLVAISGSGNVSQFTALKVIELGATVLSLSDSKGSLISEKG 260          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_LACBS (NADP-specific glutamate dehydrogenase OS=Laccaria bicolor (strain S238N-H82) GN=GDHA PE=2 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 60/188 (31.91%), Postives = 93/188 (49.47%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALL----NEHGKNIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAIKNSKG 553
            P KGG+R HP V+   +  L    T+K A+  +  GG KGG   +P   S  E+ R    F  ++   IG   DVPA D+GTG + + ++   Y K       ++TGK +  GGS  R  ATG G+++  E ++     E+  +       I G GNV  + A  + E G  ++++SD  G++   KG
Sbjct:   73 PYKGGLRLHPSVNLSILKFLGFEQTFKNALTGLSMGGGKGGSDFDPKGKSDGEIRRFCTSFMSELFRHIGQDTDVPAGDIGTGAREIGYLFGAYKKLQNEFVGMLTGKGLAWGGSFIRPEATGYGLIYYVEHMIAKAAPEYSLSKPETLVAISGSGNVAQFTALKVIELGATVLSLSDSKGSLIAEKG 260          
BLAST of FC929935 vs. ExPASy Swiss-Prot
Match: DHE4_BOTFU (NADP-specific glutamate dehydrogenase OS=Botryotinia fuckeliana GN=gdhA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 59/180 (32.78%), Postives = 92/180 (51.11%), Query Frame = 2
Query:    2 PMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPGDLSISELERLTRVFTQKIHDLIGIHADVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGK-NIAGQRFVIQGFGNVGSWAARLIGEKGGKIVAVSDISGAI 538
            P KGG+R+HP V+   +  L     +K A+  +  GG KGG   +P   S +E+ R    F +++   IG   DVPA D+  G + + ++   Y         V+TGK    GGSL R  ATG G+++    ++   G+ +  G+R  I G GNV  +AA    E G  +V++SD  G++
Sbjct:   76 PYKGGLRFHPTVNLSVLKFLGFEQIFKNALTGLNIGGGKGGADFDPKGKSDNEIRRFCVSFMRELSKHIGADTDVPAGDINVGGREIGFLFGAYKAIQNKWEGVLTGKGGSWGGSLIRPEATGYGLVYYVAHMIQYAGQGSFQGKRVAISGSGNVAQYAALKCIELGATVVSLSDSQGSL 255          
The following BLAST results are available for this feature:
BLAST of FC929935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
DHE2_PORGI2.290e-2431.10NAD-specific glutamate dehydrogenase OS=Porphyromo... [more]
DHE2_PORG32.290e-2431.10NAD-specific glutamate dehydrogenase OS=Porphyromo... [more]
DHE4_DEBOC5.101e-2433.78NADP-specific glutamate dehydrogenase OS=Debaryomy... [more]
DHE4_EMENI1.136e-2335.71NADP-specific glutamate dehydrogenase OS=Emericell... [more]
DHE4_PENCH4.318e-2334.07NADP-specific glutamate dehydrogenase OS=Penicilli... [more]
DHE4_SCHPO1.641e-2232.63NADP-specific glutamate dehydrogenase OS=Schizosac... [more]
DHE4_HEBCY8.143e-2232.45NADP-specific glutamate dehydrogenase OS=Hebeloma ... [more]
DHE4_AGABI1.064e-2131.91NADP-specific glutamate dehydrogenase OS=Agaricus ... [more]
DHE4_LACBS4.041e-2131.91NADP-specific glutamate dehydrogenase OS=Laccaria ... [more]
DHE4_BOTFU6.894e-2132.78NADP-specific glutamate dehydrogenase OS=Botryotin... [more]

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Properties
Property NameValue
Genbank descriptionC34002A06EF PostHarvC1 Citrus clementina cDNA clone C34002A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC929935 ID=FC929935; Name=FC929935; organism=Citrus clementina; type=EST; length=702bp
ACCTATGAAGGGGGGAATCAGATATCATCCTGAGGTTGACCCAGATGAGG
TTAATGCATTAGCTCAACTCATGACATGGAAGACAGCTGTAGCAAATATC
CCATATGGTGGTGCTAAAGGTGGAATAGGATGTAATCCAGGGGATTTAAG
CATATCTGAGCTAGAGAGGCTTACCAGAGTTTTTACCCAAAAGATTCATG
ATCTGATAGGAATTCATGCAGATGTTCCTGCTCCTGATATGGGGACAGGT
CCTCAGACTATGGCATGGATACTGGATGAGTATTCCAAATTTCATGGCCA
CTCGCCAGCAGTTGTAACGGGAAAACCCATTGATCTTGGCGGGTCTCTAG
GCAGAGATGCAGCTACAGGAAGAGGAGTGCTTTTTGCTACGGAGGCCCTG
CTCAATGAGCACGGGAAGAACATTGCTGGACAACGATTTGTTATACAGGG
TTTTGGAAATGTCGGTTCCTGGGCTGCTCGACTAATTGGTGAAAAAGGTG
GGAAGATTGTTGCTGTAAGTGACATCTCTGGAGCCATCAAAAACAGCAAA
GGCATTGATGTTCCAAGTCTACTTAAGCATGTAAAGGAACATCGCGGTGT
TAAAGGATTCAGTGGTGGAGATTCGATAGATTCAAATTCGATATTGATTG
AGGACTGTGACGTTCTCATCCCTGCAGCCCTTGGGGGAGTCATCAATAGG
GA
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