FC930006

Overview
NameFC930006
Unique NameFC930006
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_THET8 (Aspartate aminotransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=aspC PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.039e-13
Identity = 48/165 (29.09%), Postives = 81/165 (49.09%), Query Frame = 3
Query:    6 SSLQVSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 494
            + L V+P +  VT G  QA+      +  PG  +++  P +  Y     F    V   + LP++G+  D + +       T ALV+ +P NP G VY  + L+ LA  A +    +++DE+Y HL++  + F P    G   P   LT+   +K + + GWR+G+
Sbjct:   85 NGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMTGWRIGY 245          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: KAT3_RAT (Kynurenine--oxoglutarate transaminase 3 OS=Rattus norvegicus GN=Ccbl2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 61/208 (29.33%), Postives = 98/208 (47.12%), Query Frame = 3
Query:   15 QVSPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-------AFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAV 605
            Q+ PN+ + VT G   ++  A+  L  PG  +++  P +  YE           F  +  +  D +      W  +  ++ES     T A+++  P NP G VY+ + LQ +A+   K  TL I+DEVY  LV+ G K      + G     LT+GS  K + V GW+LGW +   P  + +  + V++   Y       AT +QAA+
Sbjct:  121 QIDPNEEILVTVGGYGSLFNAIQGLVDPGDEVIIMVPFYDCYEPMVKMAGAVPVFIPLRSKRTDGMKWTSSDWTFNPQELESKFSSKTKAIILNTPHNPIGKVYTREELQVIADLCIKHDTLCISDEVYEWLVYTGHKHIKVASLPGMWDRTLTIGSAGKTFSVTGWKLGWSI--GPGHLIKHLRTVQQTSVY-----TCATPLQAAL 321          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_SULSO (Aspartate aminotransferase OS=Sulfolobus solfataricus GN=aspC PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 51/209 (24.40%), Postives = 98/209 (46.89%), Query Frame = 3
Query:   18 VSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLL--PDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMK-KYFDILGDPATFIQAAVPSILQQPDEV 635
            V   +V VT G   A+ +   L   P   ++LP P F  Y         +  + +L    ++G+ +D+DD++S   + T  +V  NP NP G ++S   ++K+ + +   K ++++DE+Y + V+  K    +        ++ +   SK + + GWRLG+ V         K +++++M     ++   P +F+Q A        DEV
Sbjct:   93 VKKEEVIVTPGAKPALFLVFILYINPSDEVILPDPSFYSYAEVVKLLGGKPIYANLKWSREEGFSIDVDDLQSKISKRTKMIVFNNPHNPTGTLFSPNDVKKIVDISRDNKIILLSDEIYDNFVYEGKMRSTLEDSDWRDFLIYVNGFSKTFSMTGWRLGYIVA--------KREIIQKMGILAANVYTAPTSFVQKAAVKAFDTFDEV 293          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: KAT3_BOVIN (Kynurenine--oxoglutarate transaminase 3 OS=Bos taurus GN=CCBL2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 52/173 (30.06%), Postives = 85/173 (49.13%), Query Frame = 3
Query:   15 QVSPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-------LSAAFRHIEVRHFD--LLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVF-GDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFV 500
            +++PN+ + VT G   ++  A+  L   G  +++  P F  YE        +  F  +  +  D        W +D  ++ S  +  T A+++  P NP G VY+ + LQ +A+   K  TL I+DEVY  LV+ G+K F      G     +T+GS  K + V GW+LGW +
Sbjct:  121 KINPNEEILVTVGAYGSLFNAIQGLIDEGDEVIVIVPFFDCYESMVRMAGATPVFVPLRCKPVDGKKCSSSDWTLDPQELASKFNSKTKAIILNTPHNPLGKVYTKEELQVIADLCIKYDTLCISDEVYEWLVYTGNKHFKIATFPGMWERTITIGSAGKTFSVTGWKLGWSI 293          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: ALAT_YEAST (Probable alanine aminotransferase OS=Saccharomyces cerevisiae GN=ALT2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 41/137 (29.93%), Postives = 71/137 (51.82%), Query Frame = 3
Query:   21 SPNDVFVTSGCTQAIDVAMALLSRPG-ANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQ------NTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPM 410
            +P D+++T+G + A    ++LL +     +L+P P +P+Y  SA+  + +V  + L  +  W  + D+IE +             L++INPGNP G V S + + ++   A K    +I+DEVY   +F D  F  M
Sbjct:  163 TPEDIYLTTGASSAATSLLSLLCKDSQTGLLIPIPQYPLYTASASLFNAQVLPYYLDEESNWSTNSDEIEKVVQDALKKQIRPSVLIVINPGNPTGAVLSEETIARICLIAAKYGITIISDEVYQENIFNDVKFHSM 299          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_THEAQ (Aspartate aminotransferase OS=Thermus aquaticus GN=aspC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 47/165 (28.48%), Postives = 81/165 (49.09%), Query Frame = 3
Query:    6 SSLQVSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVP--ILTLGSLSKRWIVPGWRLGW 494
            + L+V+P +  VT G  QA+      +  PG  +++  P +  Y     F          LP++G+  D + +       T ALV+ +P NP G VY  + L+ LAE A +    +++DE+Y HL++    F P    G+  P   +T+   +K + + GWR+G+
Sbjct:   85 NGLEVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLAPYWVSYPEMVRFAGGVPVEVPTLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGVVYPEEVLRALAEMALQHDFYLVSDEIYEHLIYEGAHFSP----GTLAPEHTITVNGAAKAFAMTGWRIGY 245          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: KAT3_HUMAN (Kynurenine--oxoglutarate transaminase 3 OS=Homo sapiens GN=CCBL2 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 50/170 (29.41%), Postives = 81/170 (47.65%), Query Frame = 3
Query:   21 SPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-----LSAAFRHIEVRHFDLLPDK----GWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFV 500
            S  ++ VT G   ++   +  L   G  ++L  P +  YE       A    I +R   +   +     W +D  ++ES  +  T A+++  P NP G VY+ + LQ +A+   K  TL I+DEVY  LV+     + +  F G     +T+GS  K + V GW+LGW +
Sbjct:  124 SNKEILVTVGAYGSLFNTIQALIDEGDEVILIVPFYDCYEPMVRMAGATPVFIPLRSKPVYGKRWSSSDWTLDPQELESKFNSKTKAIILNTPHNPLGKVYNREELQVIADLCIKYDTLCISDEVYEWLVYSGNKHLKIATFPGMWERTITIGSAGKTFSVTGWKLGWSI 293          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_SULTO (Aspartate aminotransferase OS=Sulfolobus tokodaii GN=aspC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 54/212 (25.47%), Postives = 101/212 (47.64%), Query Frame = 3
Query:   18 VSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYE-----LSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKY-FDILGDPATFIQAAVPSILQQPDEV 635
            V   +V VT G   A+ +A  L   PG  +++  P F  Y      L     +++++  +     G+ ++L ++ES  ++ T  +V+ NP NP G V+    ++KL E   + K L+++DE+Y + ++  K    +        ++ +   SK + + GWRLG+ V         K KV+++M +   +I   P +F Q    +  +  DEV
Sbjct:   91 VRKEEVIVTPGAKTALYLAFLLYINPGDEVIIFDPSFYSYAEVVKMLGGVPVYVKMKFNE---STGFSLNLSELESKINKKTKMIVLNNPHNPTGMVFDPIEIEKLMEITKEKKVLLLSDEIYDYFIYEGKMKSVLEDPDWRDYVIYVNGFSKTFSMTGWRLGYVVA--------KEKVIKKMAEIAANIYTCPTSFAQKGALAAFESFDEV 291          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: AAT_PYRHO (Aspartate aminotransferase OS=Pyrococcus horikoshii GN=aspC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13
Identity = 49/197 (24.87%), Postives = 86/197 (43.65%), Query Frame = 3
Query:   12 LQVSPNDVFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSAAFRHIEVRHFDLLPDKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVFGSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAA 602
            + +   +V +T+G  +   +A   L   G  +++P P F  Y   A     +     L  +  +  D +++     +NT  +VI  P NP G     +  + +A+ A      +++DE Y H ++ D    PM  F     IL   S SK + + GWRLG+ V            + E  K +  ++G+ A+F+Q A
Sbjct:   88 IDIEVENVIITAGAYEGTYLAFESLLERGDEVIIPDPAFVSYAEDAKVAEAKPVRIPLREENNFLPDPNELLEKISKNTRMIVINYPNNPTGATLDKELAKTIADIAEDYNIYILSDEPYEHFIYEDAKHYPMIKFAPENTILA-NSFSKTFAMTGWRLGFVVAPSQV-------IKEMTKLHAYVIGNVASFVQIA 276          
BLAST of FC930006 vs. ExPASy Swiss-Prot
Match: KAT3_MOUSE (Kynurenine--oxoglutarate transaminase 3 OS=Mus musculus GN=Ccbl2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.737e-13
Identity = 59/208 (28.37%), Postives = 96/208 (46.15%), Query Frame = 3
Query:   15 QVSPND-VFVTSGCTQAIDVAMALLSRPGANILLPRPGFPIYELSA-------AFRHIEVRHFDLLP--DKGWEVDLDDIESLADQNTVALVIINPGNPCGNVYSYQHLQKLAETANKLKTLVIADEVYGHLVFGDKPFVPMGVF-GSTVPILTLGSLSKRWIVPGWRLGWFVTTDPCGMFRKPKVVERMKKYFDILGDPATFIQAAV 605
            Q+ PN+ + V  G   ++  ++  L  PG  +++  P +  YE           F  +  +  D +      W  D  ++ES     T A+++  P NP G VY+ Q LQ +A+   K  TL I+DEVY  LV+     V +    G     +T+GS  K + V GW+LGW +   P  + +  + V++   Y       AT +QAA+
Sbjct:  122 QIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSI--GPAHLIKHLQTVQQNSFY-----TCATPLQAAL 322          
The following BLAST results are available for this feature:
BLAST of FC930006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
AAT_THET81.039e-1329.09Aspartate aminotransferase OS=Thermus thermophilus... [more]
KAT3_RAT2.315e-1329.33Kynurenine--oxoglutarate transaminase 3 OS=Rattus ... [more]
AAT_SULSO2.315e-1324.40Aspartate aminotransferase OS=Sulfolobus solfatari... [more]
KAT3_BOVIN3.024e-1330.06Kynurenine--oxoglutarate transaminase 3 OS=Bos tau... [more]
ALAT_YEAST3.024e-1329.93Probable alanine aminotransferase OS=Saccharomyces... [more]
AAT_THEAQ3.950e-1328.48Aspartate aminotransferase OS=Thermus aquaticus GN... [more]
KAT3_HUMAN5.158e-1329.41Kynurenine--oxoglutarate transaminase 3 OS=Homo sa... [more]
AAT_SULTO5.158e-1325.47Aspartate aminotransferase OS=Sulfolobus tokodaii ... [more]
AAT_PYRHO5.158e-1324.87Aspartate aminotransferase OS=Pyrococcus horikoshi... [more]
KAT3_MOUSE6.737e-1328.37Kynurenine--oxoglutarate transaminase 3 OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionC34002G06EF PostHarvC1 Citrus clementina cDNA clone C34002G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930006 ID=FC930006; Name=FC930006; organism=Citrus clementina; type=EST; length=694bp
CGTGATCTTCCTTACAAGTTTCACCCAATGATGTCTTTGTCACATCCGGC
TGCACACAAGCCATTGATGTTGCTATGGCACTGCTTTCTCGCCCTGGTGC
AAACATCTTGCTTCCAAGACCAGGGTTTCCCATCTATGAACTTTCTGCTG
CCTTTAGGCATATTGAAGTTCGGCATTTTGATCTTCTGCCCGATAAAGGC
TGGGAGGTGGATCTTGATGATATTGAATCTCTTGCAGATCAAAACACTGT
TGCATTGGTAATTATAAACCCTGGGAATCCTTGTGGAAACGTGTACTCTT
ACCAACATTTGCAGAAGCTTGCAGAGACTGCGAACAAGCTAAAAACTCTC
GTTATAGCCGATGAAGTTTATGGGCACCTTGTTTTTGGGGATAAGCCGTT
TGTGCCGATGGGAGTTTTTGGGTCAACTGTTCCTATTCTTACACTTGGAT
CTTTATCCAAGAGATGGATAGTACCTGGATGGCGACTTGGTTGGTTTGTC
ACAACTGATCCATGTGGCATGTTTAGAAAACCCAAGGTCGTTGAGCGTAT
GAAGAAATACTTTGATATTTTGGGGGACCCTGCAACCTTTATCCAGGCAG
CAGTTCCTAGTATTCTTCAGCAGCCTGATGAGGTTTTCTTTAAGAAACTC
TTAATTTATTGAAACAGAGTGTAGATATATGTTACAATAAGATA
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