FC930520

Overview
NameFC930520
Unique NameFC930520
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length751
Libraries
Library NameType
PostHarvC1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP_DEBHA (FK506-binding protein 1 OS=Debaryomyces hansenii GN=FPR1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12
Identity = 36/85 (42.35%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            LV +HY G+L E G+ FD++ +    F   +G G VI  WD  +  + VG  AKL+     AYG  G P  +PP+ATL+F+VEL+
Sbjct:   26 LVTIHYTGTL-ENGKKFDSSRDRGKPFQCTIGVGQVIVGWDTGIPKLSVGSRAKLSIPGHEAYGDRGFPGLIPPNATLLFDVELL 109          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB12_ARATH (Peptidyl-prolyl isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 6.601e-12
Identity = 40/113 (35.40%), Postives = 66/113 (58.41%), Query Frame = 2
Query:  182 GVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEV----FDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPP-DVPPDATLIFEVELVA 505
            GV K+++R       +P +    V VH  G   + G++    + T  E    FSF++GKG+VI+ WD  +  M++GEVA+L C  +YAYG+ G P   + P++ L FE+E+++
Sbjct:    2 GVEKQVIRPGNGPKPAPGQT---VTVHCTG-FGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVIKGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVLS 110          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP3_MOUSE (FK506-binding protein 3 OS=Mus musculus GN=Fkbp3 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12
Identity = 42/93 (45.16%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTV-------FSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSP-PDVPPDATLIFEVELV 502
            +V   Y G+L + G VFDT  + ++         SF++G G VIR WD AL +M  GE A+L  +PE+AYG  G P   +PP+  LIFEVELV
Sbjct:  130 VVHCWYTGTLPD-GTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELV 221          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP3_HUMAN (FK506-binding protein 3 OS=Homo sapiens GN=FKBP3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11
Identity = 42/93 (45.16%), Postives = 55/93 (59.14%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNTV-------FSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSP-PDVPPDATLIFEVELV 502
            +V   Y G+L + G VFDT  + +          SF++G G VIR WD AL +M  GE A+L  +PE+AYG  G P   +PP+A L FEVELV
Sbjct:  130 VVHCWYTGTLQD-GTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELV 221          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB14_MOUSE (FK506-binding protein 14 OS=Mus musculus GN=Fkbp14 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 41/98 (41.84%), Postives = 55/98 (56.12%), Query Frame = 2
Query:  248 LVDVHYEGSLAETGEVFDTTHEDNT--VFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACR--PRKGSS 529
            L+ VHYEG L + G +F +TH+ N      F LG   V++ WD  L+ M VGE  KLT  P   YG  G    +PP++TLIF ++L+  R  PR   S
Sbjct:   47 LMLVHYEGYLEKDGSLFHSTHKHNNGQPVWFTLGILEVLKGWDQGLKGMCVGEKRKLTVPPALGYGKEGK-GKIPPESTLIFNIDLLEIRNGPRSHES 143          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBP4_NEUCR (FK506-binding protein 4 OS=Neurospora crassa GN=fpr-4 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 38/84 (45.24%), Postives = 55/84 (65.48%), Query Frame = 2
Query:  251 VDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELV 502
            V + Y G L + G+VFD+ ++    FSF+LGKG VI+ WDI +  M VG   +LT     AYGS  + P +PP++TLIF+V+L+
Sbjct:  384 VGMRYIGKL-QNGKVFDS-NKKGAPFSFKLGKGEVIKGWDIGVAGMAVGGERRLTIPAHLAYGSR-ALPGIPPNSTLIFDVKLL 464          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBA_ECOLI (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli (strain K12) GN=fkpA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 2
Query:  170 TGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACRP 514
            T   G++ ++V   K +A    +D   V V+Y+G+L + G+ FD ++      SF L    VI  W   L+++K G   KL   PE AYG AG P  +PP++TL+F+VEL+  +P
Sbjct:  143 TSSTGLVYQVVEAGKGEA---PKDSDTVVVNYKGTLID-GKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVP-GIPPNSTLVFDVELLDVKP 250          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBA_ECOL6 (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli O6 GN=fkpA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 2
Query:  170 TGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACRP 514
            T   G++ ++V   K +A    +D   V V+Y+G+L + G+ FD ++      SF L    VI  W   L+++K G   KL   PE AYG AG P  +PP++TL+F+VEL+  +P
Sbjct:  143 TSSTGLVYQVVEAGKGEA---PKDSDTVVVNYKGTLID-GKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVP-GIPPNSTLVFDVELLDVKP 250          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKBA_ECO57 (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli O157:H7 GN=fkpA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 42/115 (36.52%), Postives = 65/115 (56.52%), Query Frame = 2
Query:  170 TGDEGVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPPDVPPDATLIFEVELVACRP 514
            T   G++ ++V   K +A    +D   V V+Y+G+L + G+ FD ++      SF L    VI  W   L+++K G   KL   PE AYG AG P  +PP++TL+F+VEL+  +P
Sbjct:  143 TSSTGLVYQVVEAGKGEA---PKDSDTVVVNYKGTLID-GKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVP-GIPPNSTLVFDVELLDVKP 250          
BLAST of FC930520 vs. ExPASy Swiss-Prot
Match: FKB12_VICFA (Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.588e-11
Identity = 36/108 (33.33%), Postives = 63/108 (58.33%), Query Frame = 2
Query:  182 GVIKKIVRQAKPDALSPTEDLPLVDVHYEGSLAETGEVFDTTHEDNTVFSFELGKGSVIRAWDIALRSMKVGEVAKLTCKPEYAYGSAGSPP-DVPPDATLIFEVELV 502
            GV K+I+R       S  +++ +    Y  +   + + + T       F+F++G+GSVI+ WD  +  M++GEVA+L C P+YAYG+ G P   + P++ L FE+E++
Sbjct:    2 GVEKQIIRAGTGPNPSRGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVLGMQLGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVL 109          
The following BLAST results are available for this feature:
BLAST of FC930520 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
FKBP_DEBHA6.601e-1242.35FK506-binding protein 1 OS=Debaryomyces hansenii G... [more]
FKB12_ARATH6.601e-1235.40Peptidyl-prolyl isomerase FKBP12 OS=Arabidopsis th... [more]
FKBP3_MOUSE8.622e-1245.16FK506-binding protein 3 OS=Mus musculus GN=Fkbp3 P... [more]
FKBP3_HUMAN1.471e-1145.16FK506-binding protein 3 OS=Homo sapiens GN=FKBP3 P... [more]
FKB14_MOUSE2.509e-1141.84FK506-binding protein 14 OS=Mus musculus GN=Fkbp14... [more]
FKBP4_NEUCR4.279e-1145.24FK506-binding protein 4 OS=Neurospora crassa GN=fp... [more]
FKBA_ECOLI5.588e-1136.52FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBA_ECOL65.588e-1136.52FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBA_ECO575.588e-1136.52FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKB12_VICFA5.588e-1133.33Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34008D10EF PostHarvC1 Citrus clementina cDNA clone C34008D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930520 ID=FC930520; Name=FC930520; organism=Citrus clementina; type=EST; length=751bp
GACTCACTAGACGCCTATGGCCACCAAAATCCACGGCAATTTCTCCCGAT
TTATTGTCCCCGAGTCAATCGGTCAACTCGATCTCTCTTTTACGGTCGAT
AATTTTCATCTCATCACGATACGGTAGGGTTTTAAGCATTGAGAAGTTAT
GGGTGATTCAATTGATTTGACGGGTGATGAAGGTGTCATCAAGAAGATCG
TAAGGCAAGCTAAACCTGATGCTCTCTCTCCTACTGAGGACCTTCCTCTT
GTTGATGTTCATTATGAAGGCAGTCTTGCTGAAACTGGTGAAGTTTTCGA
TACCACACATGAAGACAATACTGTATTTTCTTTTGAGCTTGGGAAGGGTT
CAGTGATTCGGGCTTGGGATATTGCATTAAGAAGCATGAAGGTTGGGGAG
GTTGCAAAACTCACTTGCAAGCCAGAATATGCCTATGGCAGTGCAGGATC
TCCTCCAGATGTCCCACCTGATGCGACACTTATTTTTGAGGTGGAGTTGG
TGGCCTGCAGGCCAAGGAAAGGTTCTAGTCTTGGTAGCGTATCGGAAGAG
AGAGCCAGGCTAGAGGAGCTTAAGAGGCAAAGAGAGCTTGCTGCTGCTGC
GAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCCNAAGCTGCAGCAGCTG
CTCGTATTCAAGCCAAATGGAAGCCAAGAAGGTCAGGAAAGGGGAAAGCA
AGGGGAAATAGGGTATGTATCCCGCTCATATGGATAGCGATATGTGTGAT
G
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