FC930778

Overview
NameFC930778
Unique NameFC930778
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15214 contig Ccv1_Contig15214:1..736. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_KLULA (Nascent polypeptide-associated complex subunit alpha OS=Kluyveromyces lactis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.235e-23
Identity = 69/153 (45.10%), Postives = 91/153 (59.48%), Query Frame = 1
Query:  292 MLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPES-SAMVQ----------------DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            +LKLG+KPI GVSRVT KK    +F I +P+V+KS   + ++VFGEAK++D + +L   Q    +   V P     V+  P+S  A +Q                DD EVDETG+   DIELVM QAGVPR++A KAL   D DIV+AIM L+
Sbjct:   24 ILKLGLKPIQGVSRVTFKKKDGQIFAIDRPEVYKSQGGN-FVVFGEAKVDDFTQRLAKAQESLQQNEGVLPAGQDAVSKDPQSIQADMQAAADSATDKPSADDAVDDAEVDETGLNADDIELVMQQAGVPRAKAAKALKEHDSDIVNAIMALS 175          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_USTMA (Nascent polypeptide-associated complex subunit alpha OS=Ustilago maydis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 58/142 (40.85%), Postives = 87/142 (61.27%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPP-----------NTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIM 681
            A+  +G+K + G++RVT+++ +  L+VI++P+V+KS  SD YIVFGEAK ED+S   Q QAA+Q                 ++ + A K        DD  +DE GV+ KDI+LVM Q    R +AVKAL  ++GD+++AIM
Sbjct:   46 ALQGIGLKKVGGITRVTMRRPRGHLYVIAQPEVYKSSHSDVYIVFGEAKAEDMSQLAQAQAAQQMAQAEAQERLLAESLQNSSASGAEKKVEEEEEDDDSPIDEEGVDAKDIDLVMQQVSCSRRKAVKALKESNGDLINAIM 187          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_BABDI (Nascent polypeptide-associated complex subunit alpha OS=Babesia divergens PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.130e-23
Identity = 61/149 (40.94%), Postives = 86/149 (57.72%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQFKVPPPNTGNVASK--PESSAMVQDD----------------EEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KLGMKP+ GV++V +KKSK I FV++KPDV+K P SDTY++FGEAK+ED+S     +AA++          V +    +SSA                      + DE+ V   DI+LV++Q G  R +AV+AL    GDIV  IM+L+
Sbjct:   48 KLGMKPVDGVTKVCIKKSKQIYFVVNKPDVYKLPNSDTYVIFGEAKVEDMSQNSALEAAQRLSQLSSALQAVGADRGTDSSAAAHASGHDHAHDHDHSHGDCASKADESSVNQSDIDLVVSQVGCTREQAVEALIKNKGDIVETIMQLS 196          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_LODEL (Nascent polypeptide-associated complex subunit alpha OS=Lodderomyces elongisporus GN=EGD2 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.330e-22
Identity = 62/155 (40.00%), Postives = 92/155 (59.35%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQF---------------KVPPPNTGNV------ASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KLG+K I G+SRVT K+  N+++ I  P+V++S    TY+VFGEAK++D++ ++   Q Q A+Q                K P   T ++        +  + A   D+EEVDETG+ PKDI+L++ Q  V R  AVKAL   DGD+V+A+MEL+
Sbjct:   29 KLGLKQIKGISRVTFKQRGNLIYAIDAPEVYRSQAG-TYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGAAGDDKSPEAITADLEKASLQGGESNADAAEDDNEEVDETGINPKDIDLIVEQTRVSRGSAVKALKKHDGDMVNALMELS 182          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_CANAL (Nascent polypeptide-associated complex subunit alpha OS=Candida albicans GN=EGD2 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQF--------------KVPPPNTGNVASKPESSAMVQDDEE----VDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KL +K I G+SRVT K+  N+++ I  PDV++S  + TY+VFGEAK++D++ ++   Q Q A+Q               K P   T ++          +D+EE    +DETG++PKDIE+V+ Q  V R++AVKAL   DGD+V+AIM+L+
Sbjct:   28 KLNLKQIKGISRVTFKQRGNLIYAIDSPDVYRS-AAGTYVVFGEAKVDDMNQRIAEAQAQQAQQEALQKAAADAGKTEDKSPEAITADLEKASLGDKKAEDEEEDEGEIDETGLDPKDIEIVVEQTQVSRAKAVKALRNHDGDMVNAIMDLS 178          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_ASHGO (Nascent polypeptide-associated complex subunit alpha OS=Ashbya gossypii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.156e-21
Identity = 61/143 (42.66%), Postives = 90/143 (62.94%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASK------PESSAMVQDDEE---VDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            K  MKP+PG++RVT +K  N +F I  PDV+K+   + Y+VFGE K++D + +L   Q QAA   K P     ++A+       P + A   +++E   VDE+G++ +DIELVM QA V R++AVKAL   + DIV+AIM L+
Sbjct:   26 KFSMKPMPGITRVTFRKKNNQIFAIDNPDVYKTQGGN-YVVFGEPKVDDFTRRLARAQQQAASAAKDPQSIQADMAAAAAAPAAPAAPAAAPEEDEAGQVDESGLDGQDIELVMQQANVSRNKAVKALREHNSDIVNAIMSLS 167          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_DEBHA (Nascent polypeptide-associated complex subunit alpha OS=Debaryomyces hansenii GN=EGD2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.576e-21
Identity = 59/154 (38.31%), Postives = 94/154 (61.04%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPP--NTGNVASKPESSAMVQ------------------DDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KL +K I G++RVT K+  N+++ I +PDVF+S ++ TY+VFGEAK++D++ ++   Q Q A+Q  +      TG    + +S   +                   DD EVDE+G++ KDI++++ Q  V R++AVKAL   DGD+V+AIMEL+
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDQPDVFRS-SAGTYVVFGEAKVDDMNKRIAEAQQQQAQQDALSKAAGETGEAGEEDKSQDAITADLEKASLNTNKIEEEEADDGEVDESGLDAKDIDIIVEQTQVSRAKAVKALRVHDGDMVNAIMELS 180          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_SCHPO (Nascent polypeptide-associated complex subunit alpha OS=Schizosaccharomyces pombe GN=egd2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.787e-21
Identity = 58/141 (41.13%), Postives = 91/141 (64.54%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL------QTQAAEQFKVPPPNTGNVASKPESSAMVQDDEE----VDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KLG+K + G++RV +++ KNIL +I++P V+KS +++ YIV G+  +ED+++Q       Q QA E  +       +  ++P  +A +++  E    VDETGV+ KDIELVM QA V R++AV AL   + D+V+AIM LT
Sbjct:   33 KLGLKRVEGITRVAMRRPKNILLIINEPIVYKS-SNNAYIVLGKVTVEDMAAQARAFNESQKQATETKEEAAITEESGDAQPADTAKIEESFEQEKAVDETGVDAKDIELVMAQANVSRAKAVTALKENNSDVVNAIMSLT 172          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_PICST (Nascent polypeptide-associated complex subunit alpha OS=Pichia stipitis GN=EGD2 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.787e-21
Identity = 59/150 (39.33%), Postives = 94/150 (62.67%), Query Frame = 1
Query:  298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL-QTQAA----------------EQFKVPPPNTGNV--ASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            KL +K I G++RVT K+  N+++ I  PDV++S  + TY+VFGEAK++D++ ++   QAA                E+ K P   T ++  AS  E     +++ EVDE+G++ KDI++++ Q  V R++AVKAL   DGD+V+AIMEL+
Sbjct:   28 KLNLKQIKGITRVTFKQRGNLIYAIDAPDVYRS-AAGTYVVFGEAKVDDMNQRIADAQAAQAAETDAHAGHTHSHGEEDKSPEAITADLEKASLTEKIEEEEEEGEVDESGLDAKDIDIIVEQTQVSRAKAVKALRKHDGDMVNAIMELS 176          
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_DICDI (Nascent polypeptide-associated complex subunit alpha OS=Dictyostelium discoideum GN=nacA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.180e-20
Identity = 52/140 (37.14%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQ-----TQAAEQFKVPPPNTGNVASKPESSAMV-QDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690
            AM KLG+ P+  + RVT+K+ + +L V+++P+V+ SP+ +TY+VFG+   +D++S+LQ         +  K   P    V    ES  +V Q  +  D  GV PKD+E+VM +    R + V+ L A   D+VSA++ELT
Sbjct:   19 AMKKLGLAPVSDIFRVTIKQKEGVLVVVAEPEVYASPSGETYVVFGDHSFDDIASRLQKAVPKANVDDIVKAAMPAPTAVKESEESEEIVAQAVDSFDYKGVNPKDVEVVMKETKASREKVVETLIATKNDLVSAVLELT 158          
The following BLAST results are available for this feature:
BLAST of FC930778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
NACA_KLULA1.235e-2345.10Nascent polypeptide-associated complex subunit alp... [more]
NACA_USTMA3.594e-2340.85Nascent polypeptide-associated complex subunit alp... [more]
NACA_BABDI6.130e-2340.94Nascent polypeptide-associated complex subunit alp... [more]
NACA_LODEL2.330e-2240.00Nascent polypeptide-associated complex subunit alp... [more]
NACA_CANAL3.043e-2240.13Nascent polypeptide-associated complex subunit alp... [more]
NACA_ASHGO1.156e-2142.66Nascent polypeptide-associated complex subunit alp... [more]
NACA_DEBHA2.576e-2138.31Nascent polypeptide-associated complex subunit alp... [more]
NACA_SCHPO9.787e-2141.13Nascent polypeptide-associated complex subunit alp... [more]
NACA_PICST9.787e-2139.33Nascent polypeptide-associated complex subunit alp... [more]
NACA_DICDI2.180e-2037.14Nascent polypeptide-associated complex subunit alp... [more]

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Properties
Property NameValue
Genbank descriptionC34108H11EF PostHarvP1 Citrus clementina cDNA clone C34108H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930778 ID=FC930778; Name=FC930778; organism=Citrus clementina; type=EST; length=736bp
GAATCGGGCATTTAGGGTTTTAGTCTTCTCTCTTTCGTGTCCGCTTCTCG
TTCTCAAGTCTCAACACCCAGCCCAAAAAAAATGACTGCTCAGTCTCAAG
AAGAGCTCCTCGCTGCCCATCTTGAAGAGCAAAAGCTCAACCCCGATGAG
CCTGTAGTCGAGGACGACGATGATGAGGATGATGATGAGGAGGATGAGGA
TGATGACAAGGATGAAGACGATGTGGAAGGGAAAGGAGATGGAAGTGGTC
GCTCAAAACAGAGCAGGAGTGAAAAGAAGAGTCGGAAAGCAATGTTGAAA
CTTGGAATGAAGCCAATCCCTGGCGTCAGTCGAGTTACAGTTAAAAAGAG
CAAAAATATTTTGTTTGTTATCTCCAAACCAGATGTTTTCAAGAGTCCTA
CATCTGACACATACATTGTCTTTGGGGAAGCAAAGATCGAGGATCTGAGT
TCACAACTGCAAACTCAGGCTGCAGAGCAGTTCAAGGTCCCTCCTCCTAA
CACAGGTAATGTGGCATCAAAGCCTGAGTCATCGGCCATGGTTCAAGATG
ACGAAGAAGTAGATGAGACTGGTGTGGAGCCAAAGGACATTGAGTTGGTA
ATGACTCAAGCTGGGGTACCGAGGTCAAGGGCTGTGAAAGCACTCNAAGC
CGCAGATGGTGACATCGTTTCTGCCATTATGGAGCTAACAAATTGATGGT
CACTTTCTTAATTTATGTGCTCTGCTGAATGATCCC
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