FC930778
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_YEAST (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae GN=EGD2 PE=1 SV=3) HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19 Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT--QAAEQFKVPPPNTGNVASKPE--------------SSAMVQDDEE--VDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690 KLG+K IPG+ RVT +K N ++ I KP+VF+S Y+VFGEAK+++ + +L Q A+ + P N PE ++A +DDEE VD + DIELV+ Q V +++A+KAL A +GD+V+AIM L+ Sbjct: 26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_YEAS7 (Nascent polypeptide-associated complex subunit alpha OS=Saccharomyces cerevisiae (strain YJM789) GN=EGD2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.846e-19 Identity = 58/149 (38.93%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT--QAAEQFKVPPPNTGNVASKPE--------------SSAMVQDDEE--VDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690 KLG+K IPG+ RVT +K N ++ I KP+VF+S Y+VFGEAK+++ + +L Q A+ + P N PE ++A +DDEE VD + DIELV+ Q V +++A+KAL A +GD+V+AIM L+ Sbjct: 26 KLGLKQIPGIIRVTFRKKDNQIYAIEKPEVFRS-AGGNYVVFGEAKVDNFTQKLAAAQQQAQASGIMPSNEDVATKSPEDIQADMQAAAEGSVNAAAEEDDEEGEVDAGDLNKDDIELVVQQTNVSKNQAIKALKAHNGDLVNAIMSLS 173
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_VANPO (Nascent polypeptide-associated complex subunit alpha OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=EGD2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.112e-19 Identity = 53/144 (36.81%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQT-------------QAAEQFKVPPPNTGNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690 KLG+K I G++RVT +K N +F I P+V++S + Y+VFGEAKI++ S +L + + ++ G+ ++KP ++A D+ VD + +DIELV +QA V +++A+KAL +GDIV+AIM L+ Sbjct: 26 KLGLKKIAGINRVTFRKKDNQIFAIDNPEVYRSQGGN-YVVFGEAKIDNFSQKLAAAQEKIQSVSKSPEEIQKDMQLAADQAGDESAKPAAAAEEDDEAPVDAGDLSAEDIELVASQANVSKNKAIKALKEHNGDIVNAIMALS 168
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_YARLI (Nascent polypeptide-associated complex subunit alpha OS=Yarrowia lipolytica GN=EGD2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.014e-19 Identity = 55/158 (34.81%), Postives = 89/158 (56.33%), Query Frame = 1 Query: 298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQ--AAEQFKVPPPNTGNV-------------ASKPESSAM-------------VQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMEL 687 KL ++ + G++RV +K+++ +FVI+ P+V+K+PT ++Y+VFGEA+ ED+ + + AA Q + TG+V ASK +S +D+ E D TG+E DI+LVM QA V R++A+ L D D+V+ IM+L Sbjct: 39 KLNLQKVEGITRVVLKRTRQHIFVIANPEVYKTPTGNSYVVFGEAQHEDMQATARAAQIAAAQAQQAAAETGSVSEAAAAGEVGAELASKDPASITADLEAASLSKDEDAEDEAEADATGLEDSDIKLVMEQANVSRNKAINGLKKNDSDVVNTIMDL 196
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_CRYNE (Nascent polypeptide-associated complex subunit alpha OS=Cryptococcus neoformans GN=EGD2 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.563e-18 Identity = 55/158 (34.81%), Postives = 86/158 (54.43%), Query Frame = 1 Query: 289 AMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQLQTQAAEQ----------------FKVPPPNT---------GNVASKPESSAMVQDDEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMEL 687 A+ LG+K + G+ RVT+++++N+L V+S P+V+KSP SD YIVFGEAK+ED +S Q QA Q FK P + +S P S D + V ++I+L++ Q GV ++A +A + GD+++AIM+L Sbjct: 33 ALEGLGLKRVQGIQRVTLRRARNVLLVVSSPEVYKSPGSDCYIVFGEAKVEDPNSAAQLQAQAQLAASSQAAQQAHAHGGFKEGVPKSLEELMQDAPSTDSSAPAPSGEATDASASGDFKVSDEEIQLIVAQTGVDEAKAREAYISEKGDLINAIMKL 190
BLAST of FC930778 vs. ExPASy Swiss-Prot
Match: NACA_CANGA (Nascent polypeptide-associated complex subunit alpha OS=Candida glabrata GN=EGD2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.323e-17 Identity = 52/142 (36.62%), Postives = 84/142 (59.15%), Query Frame = 1 Query: 298 KLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYIVFGEAKIEDLSSQL---QTQAAEQFKVPPPNTGNVASKPESSAMVQD--------DEEVDETGVEPKDIELVMTQAGVPRSRAVKALXAADGDIVSAIMELT 690 KLG+K +PG+ RVT +K N +F I KP+VF+S Y+VFGEAK+++ + +L Q QA Q P ++ + +++A+ + +E+VD + DI+LV+ Q + +A+KAL +GDIV+AIM L+ Sbjct: 26 KLGLKKVPGIIRVTFRKKDNQIFAIEKPEVFRS-VGGNYVVFGEAKVDNFTQRLAAAQQQAQSQTATKTPE--DIQADMQAAAVANENKTEGDAAEEDVDAGDLSNDDIDLVVQQTNATKGQAIKALKEHNGDIVNAIMSLS 164 The following BLAST results are available for this feature:
BLAST of FC930778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930778 ID=FC930778; Name=FC930778; organism=Citrus clementina; type=EST; length=736bpback to top |