FC930781
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP213_ARATH (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 3.525e-15 Identity = 29/105 (27.62%), Postives = 51/105 (48.57%), Query Frame = 2 Query: 89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 G+KPD+ TYN +I+ C+ ++ ++ K +P+ S+ L+ + K+E+ K++ M V Y++ I +LC+ K EA LL M K Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK 362 HSP 2 Score: 47.3654 bits (111), Expect = 3.525e-15 Identity = 27/86 (31.40%), Postives = 43/86 (50.00%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G P+ V Y+ + CK+G ++A + + + G SPNSS Y TM + GD AL E ++ G P+ T S+++ L Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483 HSP 3 Score: 56.9954 bits (136), Expect = 3.719e-14 Identity = 27/89 (30.34%), Postives = 46/89 (51.69%), Query Frame = 1 Query: 412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKS 678 PN VTYS I C+DG EEA ++M GL+P++ Y ++ C+ G + A+ F + I+ G +P+ +++ L K+ Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419 HSP 4 Score: 41.2022 bits (95), Expect = 3.719e-14 Identity = 23/104 (22.12%), Postives = 51/104 (49.04%), Query Frame = 2 Query: 95 KPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406 +P + TY +I+A ++ EM + +KP+ ++ ++ G KE + ++++ +E G + V YN+ + +L K E + L+ +M S++ Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328 HSP 5 Score: 45.4394 bits (106), Expect = 1.168e-11 Identity = 33/133 (24.81%), Postives = 62/133 (46.62%), Query Frame = 2 Query: 2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIK--PDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394 ++N LL AL ++E +++ K + K P++ TY+ +I C +L M K + P+A S+ L+A F +E + + + L+ M G + YN + +LCK K +A + ++ Sbjct: 300 SYNILLRALLNQGKWEEGEKLMT---KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429 HSP 6 Score: 44.2838 bits (103), Expect = 1.168e-11 Identity = 23/86 (26.74%), Postives = 40/86 (46.51%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G+ P+ +TY+ I C++G +EA + M + P+ Y ++ CK E A+ + + G PN TT L+ G+ Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553 HSP 7 Score: 46.2098 bits (108), Expect = 4.303e-11 Identity = 29/104 (27.88%), Postives = 48/104 (46.15%), Query Frame = 2 Query: 89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 400 G PD+ ++IK F ++ E+ K +P+ ++ AL+ GF K + +D +VL M YN+ I SLC K A +L+++LS Sbjct: 119 GYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221 HSP 8 Score: 41.5874 bits (96), Expect = 4.303e-11 Identity = 23/86 (26.74%), Postives = 39/86 (45.35%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G+KP+ TY+ I G CK+G + A + R + G P+ Y ++ + G +E + ++ PN T L+T L Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTL 343
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=2 SV=1) HSP 1 Score: 50.447 bits (119), Expect = 5.939e-15 Identity = 26/101 (25.74%), Postives = 49/101 (48.51%), Query Frame = 2 Query: 98 PDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 400 P+ TY +I + +L+ M+ + N + L++G +KE K E+ + + M G K + +Y+V + LC+ K EAK +L+ M++ Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425 HSP 2 Score: 50.447 bits (119), Expect = 5.939e-15 Identity = 27/89 (30.34%), Postives = 44/89 (49.44%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGV 669 G PN+ TYS + GF K G EEA + ++ M +G S N Y ++ +C G + A+ + + G P+ S++ GL G+ Sbjct: 427 GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGI 515 HSP 3 Score: 52.373 bits (124), Expect = 1.303e-14 Identity = 31/85 (36.47%), Postives = 39/85 (45.88%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657 G N YS I G K+G EEA +R M+ G PN VY +V +C+ G A IA G +PN T SL+ G Sbjct: 357 GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKG 441 HSP 4 Score: 47.3654 bits (111), Expect = 1.303e-14 Identity = 35/135 (25.93%), Postives = 57/135 (42.22%), Query Frame = 2 Query: 2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406 +FN ++ AL + VF P+ + PD TY ++ C+ +L EM + P+ + L+ G K+ V K++ M G YN IH LC K +A +LL+ M+S + Sbjct: 189 SFNLVIKALCKLRFVDRAIEVFRGMPERKCL-PDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK 322 HSP 5 Score: 49.6766 bits (117), Expect = 6.587e-13 Identity = 29/104 (27.88%), Postives = 46/104 (44.23%), Query Frame = 2 Query: 92 IKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 I P+ ++N VIKA C+ + M + P+ ++ L+ G KEE+ ++ +L M+ G +YNV I LCK L+D M K Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286 HSP 6 Score: 44.2838 bits (103), Expect = 6.587e-13 Identity = 26/88 (29.55%), Postives = 35/88 (39.77%), Query Frame = 1 Query: 412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675 PN VTY I G K +A + M G N +Y ++ + K G E A+ ++ KG PN LV GL K Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412 HSP 7 Score: 50.0618 bits (118), Expect = 1.512e-11 Identity = 28/104 (26.92%), Postives = 49/104 (47.12%), Query Frame = 2 Query: 89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 400 G KP++ Y+ ++ C IL M PNA ++ +L+ GF+K E+ +V + M++ G Y+V I LC + + EA + +ML+ Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT 495 HSP 8 Score: 39.2762 bits (90), Expect = 1.512e-11 Identity = 25/95 (26.32%), Postives = 41/95 (43.16%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIM---SNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKS 678 G+KP++V YS I G C G+ + A K Y M P+ Y ++ +C D A+ + +G P+ T + + L+ S S Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNS 591
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP381_ARATH (Pentatricopeptide repeat-containing protein At5g14770, mitochondrial OS=Arabidopsis thaliana GN=At5g14770 PE=2 SV=2) HSP 1 Score: 50.8322 bits (120), Expect = 7.656e-15 Identity = 30/105 (28.57%), Postives = 51/105 (48.57%), Query Frame = 2 Query: 80 KTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394 K+ GIKP L + N V+ CE IL +M I PN +++ + K ++ + + K + + YG+K +YN I +LCKL +A ++ +M Sbjct: 602 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDM 706 HSP 2 Score: 49.6766 bits (117), Expect = 7.656e-15 Identity = 28/96 (29.17%), Postives = 46/96 (47.92%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVKQR 690 G+ PN TY+ I G G +E K+ M + G+ P+ Y ++ K G+ + ++ E IA G VP +T L++ A V K ++ R Sbjct: 745 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAR 840 HSP 3 Score: 48.9062 bits (115), Expect = 5.275e-12 Identity = 30/88 (34.09%), Postives = 41/88 (46.59%), Query Frame = 1 Query: 412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675 PN VTYS I G+ K G EEA R M + + PN Y T++ + K G E A+ KE G N + +LV L + + Sbjct: 399 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGR 486 HSP 4 Score: 41.9726 bits (97), Expect = 5.275e-12 Identity = 25/103 (24.27%), Postives = 43/103 (41.75%), Query Frame = 2 Query: 89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397 G PD+ T++ +I C+ +L EM+ S+ PN ++ LV +K Y + M G+ + +Y V + L K EA+ +L Sbjct: 256 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLL 358
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP388_ARATH (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 7.756e-15 Identity = 34/135 (25.19%), Postives = 63/135 (46.67%), Query Frame = 2 Query: 2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406 + N LL L + + V +F +++GI P++ T N ++KA C+ +L E+ + PN ++ ++ G+ E +VL+ M G + Y V + CKL + +EA ++D+M E Sbjct: 157 SLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291 HSP 2 Score: 40.4318 bits (93), Expect = 7.756e-15 Identity = 21/95 (22.11%), Postives = 43/95 (45.26%), Query Frame = 1 Query: 406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVKQR 690 ++PN VTY I CK+ EA+ + M P+SS+ ++ +C+ + A G ++ + +P+ + +L+ L + + R Sbjct: 292 IEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR 386 HSP 3 Score: 46.9802 bits (110), Expect = 8.602e-13 Identity = 33/120 (27.50%), Postives = 56/120 (46.67%), Query Frame = 2 Query: 41 DYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL-QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397 D + KRV E G PD TY ++ +C+ ++ +M++ I+PN ++G ++ KE+K + + +M+ER M V I +LC+ K EA L +ML Sbjct: 241 DMESAKRVLEEMLDR-GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV-IDALCEDHKVDEACGLWRKML 358 HSP 4 Score: 46.595 bits (109), Expect = 8.602e-13 Identity = 26/91 (28.57%), Postives = 42/91 (46.15%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675 G P+ +TY+ I G C+ G EA + + M PN+ Y ++ + K G+ + + +E + G PN TT L GL + K Sbjct: 395 GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.010e-14 Identity = 32/105 (30.48%), Postives = 53/105 (50.48%), Query Frame = 2 Query: 89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 G++ D TYN ++ C ++ +M + I PN +F A++ F KE K+ + K+ + M R + V YN I+ LC + EAK +LD M++K Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308 HSP 2 Score: 41.5874 bits (96), Expect = 1.010e-14 Identity = 26/86 (30.23%), Postives = 40/86 (46.51%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G P+ VTY+ I GFCK +E K +R M+ GL ++ Y T++ + G + A ++ PN T L+ GL Sbjct: 309 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391 HSP 3 Score: 49.6766 bits (117), Expect = 2.878e-14 Identity = 23/107 (21.50%), Postives = 53/107 (49.53%), Query Frame = 2 Query: 86 YGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406 +G +PD+ T + +I FC+ ++++M+ +P+ + ++ G K D ++ MER G+++ YN + LC + ++A L+ +M+ ++ Sbjct: 133 FGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239 HSP 4 Score: 48.9062 bits (115), Expect = 2.878e-14 Identity = 24/82 (29.27%), Postives = 41/82 (50.00%), Query Frame = 1 Query: 412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657 PN +T++ I F K+G F EA K Y M+ + P+ Y +++ +C G + A + KG +P+ T +L+ G Sbjct: 242 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323 HSP 5 Score: 49.6766 bits (117), Expect = 1.065e-13 Identity = 29/133 (21.80%), Postives = 59/133 (44.36%), Query Frame = 2 Query: 5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 +N+L+ L + + + R+ + I P++ T+ VI F + + EM R+ + P+ ++ +L+ G + ++ ++L +M G V YN I+ CK ++ E L EM + Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343 HSP 6 Score: 46.9802 bits (110), Expect = 1.065e-13 Identity = 23/83 (27.71%), Postives = 42/83 (50.60%), Query Frame = 1 Query: 409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657 +PN TYS +YG C + E+A + M S + + + Y +++ MCK G+ E A + KG P+ + ++++G Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460 HSP 7 Score: 52.373 bits (124), Expect = 2.334e-13 Identity = 34/130 (26.15%), Postives = 59/130 (45.38%), Query Frame = 2 Query: 5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394 F+ +L + +K+Y V +F + GI DL +YN VI C ++ +M + +P+ + +L+ GF + + D ++ ME G + V +YN I CK+ +A L D M Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200 HSP 8 Score: 43.1282 bits (100), Expect = 2.334e-13 Identity = 22/86 (25.58%), Postives = 41/86 (47.67%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G++ ++VTY+ + G C G + +A + R M + PN + ++ K G + A+ +E + P+ T SL+ GL Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP217_ARATH (Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 1.294e-14 Identity = 27/90 (30.00%), Postives = 45/90 (50.00%), Query Frame = 1 Query: 412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSV 681 PN VTY I G CK F +A F++ M G+ P++ Y TM+ + K G+ A A G VP+ +++ GL+ ++++ Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814 HSP 2 Score: 47.7506 bits (112), Expect = 1.294e-14 Identity = 31/134 (23.13%), Postives = 61/134 (45.52%), Query Frame = 2 Query: 2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 +++ L+ L A E +F K G D YN VI FC+ +L EM K +P ++G+++ G K ++ ++ + + + ++ V +Y+ I K+ + EA +L+E++ K Sbjct: 554 SYSILIHGLIKAGFANETYELFYSM-KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686 HSP 3 Score: 46.2098 bits (108), Expect = 8.907e-12 Identity = 30/131 (22.90%), Postives = 59/131 (45.04%), Query Frame = 2 Query: 2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394 A+N +++ A + E + +E + G P + YN ++ + + EM +K PN S++ L+ + K + ++ M++ G+ V N+ + LCK +K EA A+ +EM Sbjct: 310 AYNTMIMGYGSAGKFDEAYSL-LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438 HSP 4 Score: 43.8986 bits (102), Expect = 8.907e-12 Identity = 25/84 (29.76%), Postives = 40/84 (47.62%), Query Frame = 1 Query: 409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 + NS+ Y+ I F G E+ K Y+ M N SP+ + T + M K G+ E +E A+ +VP+ + L+ GL Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP270_ARATH (Pentatricopeptide repeat-containing protein At3g48810 OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.692e-14 Identity = 28/83 (33.73%), Postives = 43/83 (51.81%), Query Frame = 1 Query: 409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657 +P Y+ I G CK+ +++ A + R M G+SPN Y T++ +C G E A F + + +G PN T+ SLV G Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325 HSP 2 Score: 41.9726 bits (97), Expect = 1.692e-14 Identity = 23/103 (22.33%), Postives = 39/103 (37.86%), Query Frame = 2 Query: 80 KTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLD 388 K +G P + YN V+ + +M R +PN ++ L+ K K + K+L M G Y I S+C++ E + L + Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE 240 HSP 3 Score: 55.8398 bits (133), Expect = 2.315e-13 Identity = 28/107 (26.17%), Postives = 54/107 (50.47%), Query Frame = 2 Query: 86 YGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406 +G++P++ YN +++ FC + + M+ PN ++G+L+ GF K + + M G V +Y + +LC+ K EA++L+ E++SKE Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI-EIMSKE 451 HSP 4 Score: 39.6614 bits (91), Expect = 2.315e-13 Identity = 24/80 (30.00%), Postives = 37/80 (46.25%), Query Frame = 1 Query: 412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 651 PN VTY+ + G K EEA R + G+ +SS Y T+++ C G AL + + G P+ TM ++ Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMII 570 HSP 5 Score: 48.1358 bits (113), Expect = 2.548e-11 Identity = 30/108 (27.78%), Postives = 52/108 (48.15%), Query Frame = 2 Query: 80 KTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 K G +P++ TYN ++KA C+ +L EM K P+A S+ +++ + ++ ++ + E VS+YN I+ LCK A L+ EM+ K Sbjct: 173 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEK 275 HSP 6 Score: 40.4318 bits (93), Expect = 2.548e-11 Identity = 26/88 (29.55%), Postives = 37/88 (42.05%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYG-FCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 663 G PN T S + G F + F+ + +++ GL PN Y T+V C G+ A+ G PN T SL+ G A Sbjct: 311 GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP238_ARATH (Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 1.703e-14 Identity = 27/88 (30.68%), Postives = 41/88 (46.59%), Query Frame = 1 Query: 412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675 P+ TY I G C G +EA++ + +M +G PN +Y T+++ CK E + E KG V N T L+ G V + Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGR 378 HSP 2 Score: 46.9802 bits (110), Expect = 1.703e-14 Identity = 26/103 (25.24%), Postives = 49/103 (47.57%), Query Frame = 2 Query: 89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397 G KP++ TY +I+ C+ + +M +PN ++ ALV G + ++ D +L+ M + ++ V + I + K+ K EAK L + M+ Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285 HSP 3 Score: 50.0618 bits (118), Expect = 1.382e-13 Identity = 27/100 (27.00%), Postives = 48/100 (48.00%), Query Frame = 2 Query: 83 TYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKAL 382 T G +P++ TYN ++ CE +L +M ++ I+PN +F AL+ F K K + ++ +M + + V Y I+ LC EA+ + Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315 HSP 4 Score: 46.2098 bits (108), Expect = 1.382e-13 Identity = 25/86 (29.07%), Postives = 39/86 (45.35%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G PN V Y+ I+GFCK E+ K + MS G+ N+ Y ++ C G + A + ++ P+ T L+ GL Sbjct: 323 GCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408 HSP 5 Score: 48.521 bits (114), Expect = 3.028e-13 Identity = 30/119 (25.21%), Postives = 52/119 (43.70%), Query Frame = 2 Query: 47 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 KE+ V I+ + PD+ TY +I C + M+R PN + L+ GF K ++ ED K+ M + G+ + Y V I C + + A+ + ++M S+ Sbjct: 278 KELYNVMIQM----SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392 HSP 6 Score: 46.595 bits (109), Expect = 3.028e-13 Identity = 26/79 (32.91%), Postives = 38/79 (48.10%), Query Frame = 1 Query: 406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMK 642 M N VTY+ I G CK G E+A + + + G+ PN Y TM+ C+ G A K+ G++PN + K Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507 HSP 7 Score: 48.521 bits (114), Expect = 3.181e-12 Identity = 21/44 (47.73%), Postives = 26/44 (59.09%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVY 534 GMKPN +TY+ I GFC+ G EA ++ M G PN SVY Sbjct: 463 GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506 HSP 8 Score: 43.1282 bits (100), Expect = 3.181e-12 Identity = 27/133 (20.30%), Postives = 55/133 (41.35%), Query Frame = 2 Query: 5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 + L+ +K ++ ++F E + G+ + TY +I+ +C + +M + P+ ++ L+ G K E + + M + M + Y + I +CKL K +A L + SK Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK 462
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP125_ARATH (Pentatricopeptide repeat-containing protein At1g74900, mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 1.705e-14 Identity = 33/133 (24.81%), Postives = 56/133 (42.11%), Query Frame = 2 Query: 5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403 +N +L + K + V E + GI P+L TYN ++K F EM ++ + + ++ +V GF + + V M R G+ V+ YN I LCK A + +EM+ + Sbjct: 198 YNVILNGWCLIKRTPKALEVLKEMVER-GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR 329 HSP 2 Score: 49.6766 bits (117), Expect = 1.705e-14 Identity = 25/86 (29.07%), Postives = 41/86 (47.67%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660 G +PN TY+ I G G F ++ + M N G PN Y M+ + + + E ALG ++ + +PN T L++G+ Sbjct: 330 GYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP365_ARATH (Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 3.679e-14 Identity = 36/119 (30.25%), Postives = 55/119 (46.22%), Query Frame = 2 Query: 38 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394 KD+ VF + K G+KPD+ YN +I AFC + EM + +P +F ++ G+ K +V MM R G V +N I+ L + R+ +A +LDEM Sbjct: 533 KDWANAFAVFEDMVKE-GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650 HSP 2 Score: 41.2022 bits (95), Expect = 3.679e-14 Identity = 23/87 (26.44%), Postives = 40/87 (45.98%), Query Frame = 1 Query: 403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 663 G+ N TY+ + G+ G+ +A +++ + N GL + Y ++ CK G ++AL KE A+ N L+ G A Sbjct: 654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740 The following BLAST results are available for this feature:
BLAST of FC930781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 113
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930781 ID=FC930781; Name=FC930781; organism=Citrus clementina; type=EST; length=701bpback to top |