FC930781

Overview
NameFC930781
Unique NameFC930781
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP282_ARATH (Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 3.689e-14
Identity = 24/93 (25.81%), Postives = 44/93 (47.31%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSV 681
            G+ PN +TY+  + G CK+   ++A +    M N G+  +   Y  ++   CK  + E+A     E + +G  P+     SL++G   +   V
Sbjct:  614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706          

HSP 2 Score: 48.9062 bits (115), Expect = 3.689e-14
Identity = 24/106 (22.64%), Postives = 53/106 (50.00%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406
            GI P++ +YN V+   C          + + +  K +KPN  ++  L+ G ++    ++  +V+  M    ++    +Y   I+ LCK+ + ++A+ LL  M+ ++
Sbjct:  473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578          

HSP 3 Score: 46.595 bits (109), Expect = 3.137e-12
Identity = 24/94 (25.53%), Postives = 46/94 (48.94%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVK 684
            G+ P+ + Y+  + G  K G F +  K +  M  + ++PN  +Y  ++    + G+ + A     E + KG +P+  T   LV+G  G  + V+
Sbjct:  754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVR 847          

HSP 4 Score: 45.0542 bits (105), Expect = 3.137e-12
Identity = 26/103 (25.24%), Postives = 43/103 (41.75%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397
            GI P++ TY  ++   C+         +  EM  K +K +  ++GAL+ GF K    E  + +   +   G+     +YN  I     L     A  L  +ML
Sbjct:  614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PPR37_ARATH (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 3.716e-14
Identity = 25/95 (26.32%), Postives = 47/95 (49.47%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 373
            G+  D  TYN +I+ FCE         +  EM  + ++P+  S+  L+ G     + E   ++ + +E+  M+  + +YN+ IH +C   K  +A
Sbjct:  417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511          

HSP 2 Score: 45.4394 bits (106), Expect = 3.716e-14
Identity = 27/87 (31.03%), Postives = 42/87 (48.28%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 663
            G+KP+  TY+  I G CK G+  EA   +R M   G SPN   Y  ++      GD   +    +E    G+  + +T+K +V  L+
Sbjct:  522 GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLS 608          

HSP 3 Score: 59.3066 bits (142), Expect = 1.785e-13
Identity = 39/134 (29.10%), Postives = 60/134 (44.78%), Query Frame = 2
Query:    2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            AF+AL+         +E + +  E  +  GI PD  TY  +I  FC+         +L  M  K   PN  +F  L+ G+ K    +D  ++ + M   G+ +    YN  I   C+L K   AK L  EM+S+
Sbjct:  319 AFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR 451          

HSP 4 Score: 36.5798 bits (83), Expect = 1.785e-13
Identity = 19/85 (22.35%), Postives = 39/85 (45.88%), Query Frame = 1
Query:  406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660
            ++P+ V+Y   + G C +G  E+A + +  +  S +  +  +Y  +++ MC     + A         KG  P+  T   ++ GL
Sbjct:  453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537          

HSP 5 Score: 53.9138 bits (128), Expect = 6.598e-13
Identity = 30/105 (28.57%), Postives = 50/105 (47.62%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            G K D+  Y  +I+ FC          +L +M ++ I P+  +F AL+  F KE K  +  ++ + M + G+      Y   I   CK  +  +A  +LD M+SK
Sbjct:  277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381          

HSP 6 Score: 40.0466 bits (92), Expect = 6.598e-13
Identity = 20/61 (32.79%), Postives = 35/61 (57.38%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETAL 585
            G+  ++VTY+  I GFC+ G  E AK+ ++ M +  + P+   Y  ++  +C  G+ E AL
Sbjct:  417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP344_ARATH (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 6.186e-14
Identity = 38/134 (28.36%), Postives = 63/134 (47.01%), Query Frame = 2
Query:    2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            A NA L +L  A   +E K++F    K  G+ PD  TYN ++K + +         +L+EM     +P+     +L+   YK ++ ++  K+   M+   +K  V  YN  +  L K  K  EA  L + M+ K
Sbjct:  470 ACNASLYSLAKAGRDREAKQIFYGL-KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602          

HSP 2 Score: 40.0466 bits (92), Expect = 6.186e-14
Identity = 27/98 (27.55%), Postives = 49/98 (50.00%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVKQRAY 696
            G  PN++T++      CK+     A K    M + G  P+   Y T+++ + K G  + A+ F  + + K   P+F T+ +L+ G+  V  S+ + AY
Sbjct:  603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ-MKKLVYPDFVTLCTLLPGV--VKASLIEDAY 697          

HSP 3 Score: 48.1358 bits (113), Expect = 3.116e-12
Identity = 34/128 (26.56%), Postives = 58/128 (45.31%), Query Frame = 2
Query:   14 LLLALTIAKDYKEV-KRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            LLL      +  EV +R+ +E     G +P L TY+ ++    +         +L EM+   +KPN  +F   +    +  K  +  ++L+ M+  G    V  Y V I +LC  RK   AK + ++M
Sbjct:  197 LLLKSRFCTEAMEVYRRMILE-----GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319          

HSP 4 Score: 43.5134 bits (101), Expect = 3.116e-12
Identity = 24/89 (26.97%), Postives = 42/89 (47.19%), Query Frame = 1
Query:  409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675
            KP+ VTY   +  F  + + +  K+F+  M   G  P+   +  +V  +CK G++  A         +G +PN  T  +L+ GL  V +
Sbjct:  325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR 413          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP164_ARATH (Pentatricopeptide repeat-containing protein At2g19280 OS=Arabidopsis thaliana GN=At2g19280 PE=2 SV=2)

HSP 1 Score: 59.6918 bits (143), Expect = 6.255e-14
Identity = 30/87 (34.48%), Postives = 49/87 (56.32%), Query Frame = 1
Query:  406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAG 666
            MKP+ VT S  ++G+CK    E+A   +  + ++GL P+  +Y T+++  C  GD E A       + +G +PN +T  +LV GL G
Sbjct:  579 MKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEG 665          

HSP 2 Score: 37.7354 bits (86), Expect = 6.255e-14
Identity = 23/105 (21.90%), Postives = 45/105 (42.86%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            G  P L T   +I A            +   M  + +K +  ++  L+ G+ K  +   V +++  M   G+   V+ YN+ IHS+       EA  ++ E++ +
Sbjct:  438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRR 542          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PPR18_ARATH (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 8.057e-14
Identity = 28/80 (35.00%), Postives = 38/80 (47.50%), Query Frame = 1
Query:  412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 651
            PN V Y+  I G CK G  +EA K  ++M   G  PN   Y  M+      G  ET L   +   +KG  PN+ T + L+
Sbjct:  742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821          

HSP 2 Score: 44.669 bits (104), Expect = 8.057e-14
Identity = 28/121 (23.14%), Postives = 55/121 (45.45%), Query Frame = 2
Query:   35 AKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397
            +KD  +V   F ++      +P++ TY  ++  FC+         +L  M  +  +PN   + AL+ G  K  K ++  +V   M  +G  + +  Y+  I    K+++   A  +L +ML
Sbjct:  617 SKDVPDVDMYFKQYDDN-SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKML 736          

HSP 3 Score: 53.1434 bits (126), Expect = 2.293e-13
Identity = 29/81 (35.80%), Postives = 38/81 (46.91%), Query Frame = 1
Query:  409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLV 651
            +PN VTY   + GFCK    EEA+K    MS  G  PN  VY  ++  +CK G  + A     E    G+     T  SL+
Sbjct:  636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716          

HSP 4 Score: 42.3578 bits (98), Expect = 2.293e-13
Identity = 26/115 (22.61%), Postives = 48/115 (41.74%), Query Frame = 2
Query:   50 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            E+  +  E  K  G+  D+ TY  ++ +FC+            EM      PN  ++ AL+  + K +K    N++ + M   G    +  Y+  I   CK  +  +A  + + M
Sbjct:  500 ELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614          

HSP 5 Score: 48.1358 bits (113), Expect = 2.520e-11
Identity = 28/105 (26.67%), Postives = 42/105 (40.00%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            G  PD  TY++V+   C          +  EM R  +  +  ++  +V  F K    E   K    M   G    V  Y   IH+  K +K + A  L + MLS+
Sbjct:  478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582          

HSP 6 Score: 40.4318 bits (93), Expect = 2.520e-11
Identity = 31/107 (28.97%), Postives = 41/107 (38.32%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYF----------------TMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675
            G  PN VTYS  I G CK G  E+A + +  M  S   P+  +YF                 ++   CK    E A         +G  PN     +L+ GL  V K
Sbjct:  583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689          

HSP 7 Score: 43.8986 bits (102), Expect = 5.509e-11
Identity = 23/85 (27.06%), Postives = 37/85 (43.53%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657
            G +PN VTY+  I GF   G  E   +    M + G++PN   Y  ++   CK G  + A    +E     W  +    + ++ G
Sbjct:  774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEG 858          

HSP 8 Score: 43.5134 bits (101), Expect = 5.509e-11
Identity = 27/118 (22.88%), Postives = 48/118 (40.68%), Query Frame = 2
Query:   50 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            E  R  ++     G +P+   Y+ +I   C+         +  EM          ++ +L+  ++K ++ +  +KVL  M        V +Y   I  LCK+ K  EA  L+  M  K
Sbjct:  656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP105_ARATH (Pentatricopeptide repeat-containing protein At1g64580 OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 8.183e-14
Identity = 37/133 (27.82%), Postives = 56/133 (42.11%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            +N ++  L   +D      VF    K  GI+ D  TYN +I              +L +M ++ I PN   F AL+  F KE    +   + + M R  +   V  YN  I+  C      +AK + D M+SK
Sbjct:  187 YNTVINGLCKNRDLNNALEVFYCMEKK-GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318          

HSP 2 Score: 45.0542 bits (105), Expect = 8.183e-14
Identity = 27/94 (28.72%), Postives = 41/94 (43.62%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVK 684
            G  P+ VTY+  I GFCK    E+  K +  M+  GL  ++  Y T+++  C+ G    A       +  G  P+  T   L+  L    K  K
Sbjct:  319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEK 412          

HSP 3 Score: 51.6026 bits (122), Expect = 1.381e-13
Identity = 31/134 (23.13%), Postives = 60/134 (44.78%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406
            +N+L+    I     + K +F +   + G  PD+ TYN +I  FC+         +  EM  + +  +A ++  L+ G+ +  K     KV   M   G+   +  YN+ +  LC   K  +A  +++++   E
Sbjct:  292 YNSLINGFCIHGCLGDAKYMF-DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSE 424          

HSP 4 Score: 44.669 bits (104), Expect = 1.381e-13
Identity = 20/74 (27.03%), Postives = 38/74 (51.35%), Query Frame = 1
Query:  406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 627
            M  + +TY+  I G C+    +EA   +R ++  G+ P++  Y TM+  +C+ G    A   C+     G++P+
Sbjct:  425 MDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498          

HSP 5 Score: 50.0618 bits (118), Expect = 1.793e-13
Identity = 24/90 (26.67%), Postives = 46/90 (51.11%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLR 358
            GI  DL ++  +I  FC          +L +M +   +P+  + G+L+ GF +  ++++   ++  M+ +G    V +YN  I+ LCK R
Sbjct:  109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNR 198          

HSP 6 Score: 45.8246 bits (107), Expect = 1.793e-13
Identity = 25/85 (29.41%), Postives = 40/85 (47.06%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657
            G++ ++VTY+  I G    G + +A +  R M    + PN   +  ++    K G+   A    KE I +  VPN  T  SL+ G
Sbjct:  214 GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298          

HSP 7 Score: 45.8246 bits (107), Expect = 5.358e-12
Identity = 28/96 (29.17%), Postives = 44/96 (45.83%), Query Frame = 1
Query:  412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK-SVKQRAY 696
            PN  TY+  I GFC  G   +AK  + +M + G  P+   Y T++   CK    E  +    E   +G V +  T  +L+ G     K +V Q+ +
Sbjct:  287 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382          

HSP 8 Score: 45.0542 bits (105), Expect = 5.358e-12
Identity = 23/106 (21.70%), Postives = 45/106 (42.45%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406
            G +P + T   ++  FC+         ++  MD     PN   +  ++ G  K     +  +V   ME+ G+++    YN  I  L    +  +A  LL +M+ ++
Sbjct:  144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK 249          

HSP 9 Score: 43.8986 bits (102), Expect = 4.321e-11
Identity = 30/130 (23.08%), Postives = 55/130 (42.31%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            +N L+  L+ +  + +  R+  +  K   I P++  +  +I  F +         +  EM R+S+ PN  ++ +L+ GF       D   +  +M   G    V  YN  I   CK ++  +   L  EM
Sbjct:  222 YNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350          

HSP 10 Score: 43.8986 bits (102), Expect = 4.321e-11
Identity = 23/91 (25.27%), Postives = 43/91 (47.25%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675
            G+  ++ TY+  I+G+C+ G    A+K +  M + G+SP+   Y  ++  +C  G  E AL   ++        +  T   ++ GL    K
Sbjct:  354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PPR56_ARATH (Pentatricopeptide repeat-containing protein At1g22960, mitochondrial OS=Arabidopsis thaliana GN=At1g22960 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 1.055e-13
Identity = 28/86 (32.56%), Postives = 44/86 (51.16%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660
            G+ P+ VTY+  I G+ ++G F+ A+  Y  M    L P+   YF ++Y   K G  E A  +  E   +G  PN  T  +L+ G+
Sbjct:  545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630          

HSP 2 Score: 42.743 bits (99), Expect = 1.055e-13
Identity = 29/105 (27.62%), Postives = 44/105 (41.90%), Query Frame = 2
Query:   92 IKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406
            I P + TYN +I   CE         +  EM  + I P+  ++  LV GF K        +V   M R G+K     Y  R     +L    +A  L +EM++ +
Sbjct:  405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509          

HSP 3 Score: 50.0618 bits (118), Expect = 2.427e-12
Identity = 35/134 (26.12%), Postives = 59/134 (44.03%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406
            FN +L +   A D + V ++++E  K   I+    TYN +I  F +            +M R        SF  L+ G+ K+  ++D   V   M   G+    S YN+ I +LC   +  +A+ LL  M + +
Sbjct:  241 FNTMLDSCFKAGDLERVDKIWLEM-KRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPD 373          

HSP 4 Score: 41.9726 bits (97), Expect = 2.427e-12
Identity = 23/72 (31.94%), Postives = 35/72 (48.61%), Query Frame = 1
Query:  412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPN 627
            P+ VTY+  I G C+ GN E A++    M+   + P+   Y T+V    K G+   A     E + KG  P+
Sbjct:  407 PSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPD 478          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP326_ARATH (Pentatricopeptide repeat-containing protein At4g19895 OS=Arabidopsis thaliana GN=At4g19895 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 1.055e-13
Identity = 28/114 (24.56%), Postives = 55/114 (48.25%), Query Frame = 2
Query:   59 RVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 400
            R+F++  ++   KP++ TY  +I  +C+         + + M  + + PN +++  L+ G  K   +    +++ +M   G    +  YN  I SLCK  +  EA  LL++  S
Sbjct:  343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456          

HSP 2 Score: 40.4318 bits (93), Expect = 1.055e-13
Identity = 27/121 (22.31%), Postives = 48/121 (39.67%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIY-----------------------------------GFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660
            G++ + VTY+  I                                     FC+    +E+++ ++++ + GL P    Y +M+   CK GD + AL +       G VP+  T  SL++GL
Sbjct:  458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 578          

HSP 3 Score: 54.299 bits (129), Expect = 1.780e-13
Identity = 27/90 (30.00%), Postives = 43/90 (47.78%), Query Frame = 1
Query:  409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKS 678
            KPN  TY+  I G+CK+     A+  +  M   GL PN + Y T++   CK G +  A         +G++PN  T  + +  L   S++
Sbjct:  355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRA 444          

HSP 4 Score: 41.5874 bits (96), Expect = 1.780e-13
Identity = 25/88 (28.41%), Postives = 37/88 (42.05%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCK 352
            G  PD  T   ++ A CE            +M     KPN  +F +L+ G  K+   +   ++L+ M R G K  V  +   I  LCK
Sbjct:  247 GFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 334          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP239_ARATH (Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana GN=PPR40 PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 1.373e-13
Identity = 33/128 (25.78%), Postives = 61/128 (47.66%), Query Frame = 2
Query:   14 LLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397
            L+ AL  A+ + E  R +++     G+   + +YN VI   C+          L EM  + I PN  +F   ++G+      + V+ VL+ +  +G K  V  +++ I+ LC+ ++  +A     EML
Sbjct:  396 LVQALLNAQRFSEGDR-YLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522          

HSP 2 Score: 45.8246 bits (107), Expect = 1.373e-13
Identity = 25/96 (26.04%), Postives = 44/96 (45.83%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVKQR 690
            G++PN +TY+  I   C  G+ + + K +  M  +GLSP+   Y   +   CK    + A    K  +  G  P+  T  +L+  L+   +  + R
Sbjct:  525 GIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAR 620          

HSP 3 Score: 58.9214 bits (141), Expect = 1.512e-11
Identity = 37/131 (28.24%), Postives = 58/131 (44.27%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397
            FN  L   ++  D K+V  V +E    +G KPD+ T++ +I   C             EM    I+PN  ++  L+         +   K+   M+  G+   +  YN  I S CK+RK  +A+ LL  ML
Sbjct:  463 FNTFLSGYSVRGDVKKVHGV-LEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592          

HSP 4 Score: 30.4166 bits (67), Expect = 1.512e-11
Identity = 13/41 (31.71%), Postives = 22/41 (53.66%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNS 525
            G+KP++ TYS  I    + G   EA++ +  +   G  P+S
Sbjct:  595 GLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP275_ARATH (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 1.374e-13
Identity = 30/134 (22.39%), Postives = 60/134 (44.78%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEK-YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            F +LL          E K V ++  K  G++PD+  +  ++  +           ++ +M ++  +PN + +  L+    + EK  ++  +V   MERYG ++ +  Y   I   CK     +  ++LD+M  K
Sbjct:  239 FTSLLYGWCREGKLMEAKEVLVQM-KEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371          

HSP 2 Score: 42.743 bits (99), Expect = 1.374e-13
Identity = 23/85 (27.06%), Postives = 36/85 (42.35%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657
            G+ P+ VTY   +    K   FEE  +    M   G  P+  +Y  ++   CK G+ + A+    E  A G  P   T   ++ G
Sbjct:  372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMING 456          

HSP 3 Score: 68.5514 bits (166), Expect = 3.791e-11
Identity = 41/144 (28.47%), Postives = 70/144 (48.61%), Query Frame = 2
Query:   38 KDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE*SRIQSLIAISFMGSAKMGIL 469
            K   E  RVF+E  + YG + D+ TY  +I  FC+         +L +M +K + P+  ++  ++    K+E++E+  ++++ M+R G    + +YNV I   CKL +  EA  L +EM +   S       I   G    G L
Sbjct:  321 KRMDEAMRVFVEMER-YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFL 463          
The following BLAST results are available for this feature:
BLAST of FC930781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
PP282_ARATH3.689e-1425.81Pentatricopeptide repeat-containing protein At3g54... [more]
PPR37_ARATH3.716e-1426.32Pentatricopeptide repeat-containing protein At1g12... [more]
PP344_ARATH6.186e-1428.36Pentatricopeptide repeat-containing protein At4g31... [more]
PP164_ARATH6.255e-1434.48Pentatricopeptide repeat-containing protein At2g19... [more]
PPR18_ARATH8.057e-1435.00Pentatricopeptide repeat-containing protein At1g06... [more]
PP105_ARATH8.183e-1427.82Pentatricopeptide repeat-containing protein At1g64... [more]
PPR56_ARATH1.055e-1332.56Pentatricopeptide repeat-containing protein At1g22... [more]
PP326_ARATH1.055e-1324.56Pentatricopeptide repeat-containing protein At4g19... [more]
PP239_ARATH1.373e-1325.78Putative pentatricopeptide repeat-containing prote... [more]
PP275_ARATH1.374e-1322.39Pentatricopeptide repeat-containing protein At3g49... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34109A02EF PostHarvP1 Citrus clementina cDNA clone C34109A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930781 ID=FC930781; Name=FC930781; organism=Citrus clementina; type=EST; length=701bp
GGCTTTCAACGCTTTGTTGTTGGCTCTCACGATAGCCAAAGACTACAAAG
AAGTTAAACGGGTATTTATCGAATTTCCCAAGACTTACGGAATCAAGCCG
GATTTGGATACCTACAACAGGGTAATTAAGGCGTTTTGTGAGTCCAGTGA
TTCAAGTTCTGCAGACTCGATTTTGGCTGAAATGGATAGGAAGTCGATTA
AACCAAACGCCTCGAGTTTTGGAGCTTTGGTGGCTGGGTTTTATAAGGAG
GAGAAGTATGAAGATGTGAATAAAGTCTTGCAAATGATGGAAAGATATGG
GATGAAGTCTGGGGTTAGTATGTATAATGTGAGGATTCATAGCCTTTGTA
AGTTAAGAAAGTGTGCAGAAGCTAAGGCATTGCTTGATGAGATGTTGTCT
AAGGAATGAAGCCGAATTCAGTCACTTATAGCCATTTCATTTATGGGTTC
TGCAAAGATGGGAATTTTGAAGAAGCTAAGAAGTTTTATAGGATTATGAG
TAACAGTGGGTTGTCGCCAAATAGCTCTGTATATTTTACTATGGTGTATT
TCATGTGTAAAGGTGGGGATTATGAGACAGCACTGGGCTTCTGCAAGGAG
AGTATAGCGAAGGGTTGGGTGCCTAATTTCACGACTATGAAATCATTGGT
GACTGGGCTGGCTGGTGTTTCAAAGTCAGTGAAGCAAAGAGCTTATTGGC
C
back to top