FC930781

Overview
NameFC930781
Unique NameFC930781
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP409_ARATH (Pentatricopeptide repeat-containing protein At5g40400 OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.375e-13
Identity = 28/82 (34.15%), Postives = 42/82 (51.22%), Query Frame = 1
Query:  412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657
            P+ VTY+  I G CKDG   EA + +  M + G+ P+   Y T++Y  CK G  + +     E +    VP+  T K +V G
Sbjct:  304 PDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEG 385          

HSP 2 Score: 40.4318 bits (93), Expect = 1.375e-13
Identity = 26/105 (24.76%), Postives = 44/105 (41.90%), Query Frame = 2
Query:   59 RVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEA 373
            RVF E   + G    + T N ++    +         + + M R  I PN  +F  L   F  +  + +V+  L+ ME  G +  +  YN  + S C+  +  EA
Sbjct:  187 RVFREVLDS-GFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEA 290          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP156_ARATH (Pentatricopeptide repeat-containing protein At2g16880 OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 1.777e-13
Identity = 29/114 (25.44%), Postives = 49/114 (42.98%), Query Frame = 2
Query:   53 VKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            V R   E    +G  PD+ TY+ +IKA+ +         ++ EM +K IK N  +   ++    KE K ++ + +L    + G       Y   I    +  K  +A  + DEM
Sbjct:  399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512          

HSP 2 Score: 47.7506 bits (112), Expect = 1.777e-13
Identity = 27/83 (32.53%), Postives = 41/83 (49.40%), Query Frame = 1
Query:  412 PNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660
            P   T++  I G C  G  E A + +  ++ SGL P+ S + +++   CK G  E A  F  ESI   + P+  T   L+ GL
Sbjct:  519 PTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601          

HSP 3 Score: 54.6842 bits (130), Expect = 8.944e-12
Identity = 29/132 (21.97%), Postives = 60/132 (45.45%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 400
            FN L+    +    ++   +       + + PD  TYN ++KA  +         +L +M +  + PN  ++  LV G+ K    ++  +++++M++  +   +  YN+ I+ LC      E   L+D M S
Sbjct:  207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338          

HSP 4 Score: 35.4242 bits (80), Expect = 8.944e-12
Identity = 23/83 (27.71%), Postives = 39/83 (46.99%), Query Frame = 1
Query:  406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESI-AKGWVPNFTTMKSLV 651
            ++P+ VTY+  I G  + G   EA+K    M N G+  N   +   + ++CK    E      KE +   G+ P+  T  +L+
Sbjct:  341 LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP218_ARATH (Pentatricopeptide repeat-containing protein At3g07290, mitochondrial OS=Arabidopsis thaliana GN=At3g07290 PE=2 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 2.299e-13
Identity = 28/103 (27.18%), Postives = 50/103 (48.54%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397
            G KP++ TY  +I   C          +  +M +  I P+  ++ AL+ G+ K+ +     ++L +ME+   K  V  +N  +  LC++ K  +A  LL  ML
Sbjct:  331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433          

HSP 2 Score: 44.669 bits (104), Expect = 2.299e-13
Identity = 24/92 (26.09%), Postives = 44/92 (47.83%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKS 678
            G+ P+ V+Y+  I G C++G+   A K    M+   + P+   +  ++   CK G  + A  F    + KG   +  T  +L+ G+  V K+
Sbjct:  436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527          

HSP 3 Score: 50.0618 bits (118), Expect = 8.904e-12
Identity = 30/102 (29.41%), Postives = 51/102 (50.00%), Query Frame = 2
Query:   92 IKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEK-YEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            I P + TYN +I  +C+         +L  M++++ KPN  +F  L+ G  +  K Y+ V+ + +M++  G+   +  YNV I  LC+      A  LL  M
Sbjct:  367 IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN-GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467          

HSP 4 Score: 40.0466 bits (92), Expect = 8.904e-12
Identity = 29/93 (31.18%), Postives = 46/93 (49.46%), Query Frame = 1
Query:  406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVK 684
            ++P+ +T++  I  FCK G  + A  F  +M   G+S +     T++  +CK G    AL F  E++ K  +   TT  SL   L  +SK  K
Sbjct:  472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL-FILETLVKMRI--LTTPHSLNVILDMLSKGCK 561          

HSP 5 Score: 49.2914 bits (116), Expect = 1.948e-11
Identity = 34/132 (25.76%), Postives = 62/132 (46.97%), Query Frame = 2
Query:    5 FNALLLALT-IAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEML 397
            FN L+  L  + K YK V    ++     G+ PD+ +YN +I   C          +L+ M+   I+P+  +F A++  F K+ K +  +  L +M R G+          I  +CK+ K  +A  +L+ ++
Sbjct:  409 FNELMEGLCRVGKPYKAVH--LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538          

HSP 6 Score: 39.6614 bits (91), Expect = 1.948e-11
Identity = 24/91 (26.37%), Postives = 38/91 (41.76%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675
            G+ P+ VTY+  + G  + G+   + +   +M  SG  PN   Y  ++  +C+ G  E A          G  PN  T   +V G     K
Sbjct:  576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGK 666          

HSP 7 Score: 51.9878 bits (123), Expect = 2.528e-11
Identity = 30/93 (32.26%), Postives = 42/93 (45.16%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSV 681
            G  PN   Y+  I G C+ G  EEA+K    M +SG+SPN   Y  MV      G  + AL   +  + +G+  N     SL+ G     K +
Sbjct:  611 GCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGI 703          

HSP 8 Score: 36.5798 bits (83), Expect = 2.528e-11
Identity = 27/103 (26.21%), Postives = 45/103 (43.69%), Query Frame = 2
Query:   86 YGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            + I+PD  T+  +I AFC+          L  M RK I  +  +   L+ G  K  K  D   +L+ + +  + +     NV +  L K  K  E  A+L ++
Sbjct:  470 FDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKI 572          

HSP 9 Score: 50.8322 bits (120), Expect = 5.527e-11
Identity = 30/102 (29.41%), Postives = 46/102 (45.10%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            G +P   TY  +IKA C+         +  EM  +  KPN  ++  L+ G  ++ K E+ N V + M +  +   V  YN  I+  CK  +   A  LL  M
Sbjct:  296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397          

HSP 10 Score: 36.5798 bits (83), Expect = 5.527e-11
Identity = 18/58 (31.03%), Postives = 31/58 (53.45%), Query Frame = 1
Query:  409 KPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETA 582
            KPN  T++  + G C+ G   +A    + M ++GLSP+   Y  ++  +C+ G   TA
Sbjct:  403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTA 460          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP376_ARATH (Pentatricopeptide repeat-containing protein At5g12100, mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 2.303e-13
Identity = 31/91 (34.07%), Postives = 42/91 (46.15%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675
            G  PN V+Y   I   CK     EA+   R M + G+SP   +Y  ++   C  G  E A  F KE + KG   N  T  +L+ GL+   K
Sbjct:  489 GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGK 579          

HSP 2 Score: 41.2022 bits (95), Expect = 2.303e-13
Identity = 24/105 (22.86%), Postives = 46/105 (43.81%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            G+K +  T + ++ A C+         IL     K + PN   +  ++ G+ ++         ++ ME+ GMK     YN  I   C+L +   A+  +++M  K
Sbjct:  349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453          

HSP 3 Score: 53.5286 bits (127), Expect = 5.294e-12
Identity = 36/119 (30.25%), Postives = 52/119 (43.70%), Query Frame = 2
Query:   47 KEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            KEV ++     K  G+ P ++TYN +I  +           IL EM+     PN  S+G L+    K  K  +   V + ME  G+   V +YN+ I   C   K  +A     EML K
Sbjct:  445 KEVNKM-----KLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKK 558          

HSP 4 Score: 37.3502 bits (85), Expect = 5.294e-12
Identity = 31/128 (24.22%), Postives = 44/128 (34.38%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCK-------------------------------GGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVKQRA 693
            G+KP+  TY+  I G+   GN +     Y  M  SG+ P    Y  ++    K                                GD E A    K+ I K    + TT  SL+ G   V K  + R+
Sbjct:  594 GLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRS 721          

HSP 5 Score: 45.4394 bits (106), Expect = 8.922e-12
Identity = 24/85 (28.24%), Postives = 39/85 (45.88%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657
            G+ PN V Y+  I G+C+ G+   A+     M   G+ P+   Y  ++   C+ G+ E A     +   KG  P+  T   L+ G
Sbjct:  384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468          

HSP 6 Score: 44.669 bits (104), Expect = 8.922e-12
Identity = 27/104 (25.96%), Postives = 48/104 (46.15%), Query Frame = 2
Query:   92 IKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            I+P L T+N ++K   +         +L EM      P+A +F  L  G+   EK E    V +     G+K      ++ +++LCK  K  +A+ +L   ++K
Sbjct:  280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP291_ARATH (Pentatricopeptide repeat-containing protein At3g61360 OS=Arabidopsis thaliana GN=At3g61360 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 2.332e-13
Identity = 33/130 (25.38%), Postives = 59/130 (45.38%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            FN LL A    ++ KE + +F +    +   PD+ T N ++  F E            EM ++  KPN+ ++G  + GF K+  + +  ++ + M+R      V +    IH     R   +A+ L DE+
Sbjct:  179 FNILLRAFCTEREMKEARSIFEKLHSRFN--PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEI 306          

HSP 2 Score: 40.4318 bits (93), Expect = 2.332e-13
Identity = 22/88 (25.00%), Postives = 39/88 (44.32%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGF--CKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660
            G++P+SVT+     G    K+  F    ++Y+ M    L P +     ++   C  G+    L   K  + KG+ P+   ++ L T L
Sbjct:  345 GIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTAL 432          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP152_ARATH (Pentatricopeptide repeat-containing protein At2g15630, mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=2 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 3.011e-13
Identity = 27/86 (31.40%), Postives = 45/86 (52.33%), Query Frame = 1
Query:  406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLA 663
            + P+ VTY+  + G C +G FEEA++    M   G+ P+   Y T++    K GD + A     E ++ G+ P   T  +L+ GL+
Sbjct:  498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLS 583          

HSP 2 Score: 49.2914 bits (116), Expect = 3.011e-13
Identity = 23/85 (27.06%), Postives = 44/85 (51.76%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTG 657
            G+  +SVTY+  I G+C+ G+ ++A   +  M   G+ P    Y +++Y +C+      A    ++ + KG  P+   M +L+ G
Sbjct:  392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDG 476          

HSP 3 Score: 45.8246 bits (107), Expect = 3.011e-13
Identity = 32/118 (27.12%), Postives = 48/118 (40.68%), Query Frame = 2
Query:   50 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            E  R+ I   K+ G +PD+ TYN ++   C          +L EM    + P++ S+  L+ G       E        M + GM      YN  IH L    K   A+ L+ E+  K
Sbjct:  277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391          

HSP 4 Score: 42.3578 bits (98), Expect = 3.011e-13
Identity = 27/115 (23.48%), Postives = 50/115 (43.48%), Query Frame = 2
Query:   50 EVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            E   + I   +  GI  D  TYN +I  +C+         +  EM    I+P   ++ +L+    ++ K  + +++ + +   GMK  + M N  +   C +     A +LL EM
Sbjct:  379 EAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493          

HSP 5 Score: 48.521 bits (114), Expect = 1.112e-12
Identity = 27/86 (31.40%), Postives = 41/86 (47.67%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660
            G +P+  TY+  +   C +G    A +  R M   GL P+S  Y  ++      GD E A  +  E + +G VP F T  +L+ GL
Sbjct:  290 GFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372          

HSP 6 Score: 44.669 bits (104), Expect = 1.112e-12
Identity = 27/108 (25.00%), Postives = 44/108 (40.74%), Query Frame = 2
Query:   80 KTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSK 403
            K  G  P  +T N ++                A+M R  IK N  +F  ++    KE K +     L +ME +G+K  +  YN  +       +   A+ ++ EM SK
Sbjct:  182 KEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSK 289          

HSP 7 Score: 55.8398 bits (133), Expect = 3.312e-11
Identity = 33/104 (31.73%), Postives = 49/104 (47.12%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLS 400
            G+KPDL   N ++   C          +L EMD  SI P+  ++  L+ G   E K+E+  +++  M+R G+K     YN  I    K      A  + DEMLS
Sbjct:  462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS 565          

HSP 8 Score: 32.3426 bits (72), Expect = 3.312e-11
Identity = 15/51 (29.41%), Postives = 27/51 (52.94%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFM 555
            G  P  +TY+  + G  K+   E A++  R M + G+ PN S + +++  M
Sbjct:  567 GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP161_ARATH (Pentatricopeptide repeat-containing protein At2g17670 OS=Arabidopsis thaliana GN=At2g17670 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 3.035e-13
Identity = 25/102 (24.51%), Postives = 48/102 (47.06%), Query Frame = 2
Query:   89 GIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            G KPD   YN ++K FC          +  +M  + ++P+  ++  L+ G  K  + E+    L+ M   G +   + Y   ++ +C+  +   A +LL+EM
Sbjct:  260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM 361          

HSP 2 Score: 43.1282 bits (100), Expect = 3.035e-13
Identity = 24/95 (25.26%), Postives = 45/95 (47.37%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSVKQ 687
            G  PN  TY+  ++G CK    ++  + Y +M +SG+   S+ Y T+V  + K G    A      ++    + + +   +L T L  + K+ +Q
Sbjct:  365 GCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAKEQ 459          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP404_ARATH (Pentatricopeptide repeat-containing protein At5g38730 OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 3.916e-13
Identity = 36/168 (21.43%), Postives = 69/168 (41.07%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVL----------------------------------QMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEMLSKE 406
            +N L+ A + + D ++ +++  E  +  G+ PD+ TYN +I  +C+         +   M+R  + PN  ++ + + GF +E +  +  ++                                   ++ME  G   GV  YN  +  LC+  +  EA  LL EM  K+
Sbjct:  206 YNVLVHACSKSGDPEKAEKLLSEMEEK-GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372          

HSP 2 Score: 40.817 bits (94), Expect = 3.916e-13
Identity = 25/90 (27.78%), Postives = 42/90 (46.67%), Query Frame = 1
Query:  406 MKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSK 675
            ++P+++T +  I  +CK  +   A K  + M  SGL  +   Y  +++  CK  + E A       I KG+ P + T   LV G    +K
Sbjct:  373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNK 462          

HSP 3 Score: 46.2098 bits (108), Expect = 4.111e-12
Identity = 31/131 (23.66%), Postives = 60/131 (45.80%), Query Frame = 2
Query:    2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            A   LL +L   +    V ++F +  K  G+  ++  YN ++ A  +         +L+EM+ K + P+  ++  L++ + K+  + +   V   MER G+   +  YN  IH   +  +  EA  L  E+
Sbjct:  170 ACTVLLNSLVKQRLTDTVWKIFKKMVKL-GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI 299          

HSP 4 Score: 45.0542 bits (105), Expect = 4.111e-12
Identity = 25/89 (28.09%), Postives = 41/89 (46.07%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGV 669
            G  P  VTY+  +   C+DG   EA +    MS   + P++    T++   CK  D  +A+   K+ I  G   +  + K+L+ G   V
Sbjct:  337 GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKV 425          

HSP 5 Score: 51.2174 bits (121), Expect = 3.316e-11
Identity = 26/86 (30.23%), Postives = 47/86 (54.65%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGL 660
            G+ PN VTY+ FI+GF ++G   EA + +R + +  ++ N   Y T++   C+  D + AL   +   ++G+ P   T  S++  L
Sbjct:  268 GVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352          

HSP 6 Score: 36.965 bits (84), Expect = 3.316e-11
Identity = 27/111 (24.32%), Postives = 43/111 (38.74%), Query Frame = 2
Query:   62 VFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            V  E  ++ G+KP L     ++ +  +         I  +M +  +  N   +  LV    K    E   K+L  ME  G+   +  YN  I   CK     EA ++ D M
Sbjct:  154 VVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP392_ARATH (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.933e-13
Identity = 35/130 (26.92%), Postives = 57/130 (43.85%), Query Frame = 2
Query:    5 FNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            ++ L+  L      KE   +F +     GI PD  T+N +I  FC          IL  M +    PN  ++ AL+ GF K  K ++  +    +++ G+K     Y   ++  C+  +  EA  LL EM
Sbjct:  235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEM 364          

HSP 2 Score: 37.3502 bits (85), Expect = 3.933e-13
Identity = 22/93 (23.66%), Postives = 42/93 (45.16%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKGWVPNFTTMKSLVTGLAGVSKSV 681
            G+  N  +Y   +   C +G  E+A KF  +MS  G+ P+ + +  +V  +C+ G  E  +      +  G +P   +  ++V  +    K V
Sbjct:  403 GVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLV 495          
BLAST of FC930781 vs. ExPASy Swiss-Prot
Match: PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 6.615e-13
Identity = 37/131 (28.24%), Postives = 63/131 (48.09%), Query Frame = 2
Query:    2 AFNALLLALTIAKDYKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            A N+L+ AL      +    VF++   T  IKPD  T+N +I  FC+         ++  M      P+  ++ + V  + KE  +  VN++L+ M   G    V  Y + +HSL K ++ AEA  + ++M
Sbjct:  241 AMNSLMDALVKENSIEHAHEVFLKLFDT--IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369          

HSP 2 Score: 33.8834 bits (76), Expect = 6.615e-13
Identity = 16/48 (33.33%), Postives = 27/48 (56.25%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMV 546
            G  P++  YS  I+   K G F++A + +  M+N G+  +  VY TM+
Sbjct:  373 GCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMI 420          

HSP 3 Score: 51.9878 bits (123), Expect = 2.559e-11
Identity = 29/117 (24.79%), Postives = 53/117 (45.30%), Query Frame = 2
Query:   44 YKEVKRVFIEFPKTYGIKPDLDTYNRVIKAFCEXXXXXXXXXILAEMDRKSIKPNASSFGALVAGFYKEEKYEDVNKVLQMMERYGMKSGVSMYNVRIHSLCKLRKCAEAKALLDEM 394
            Y +    F+E  K+YG+K D    N ++ A  +         +  ++   +IKP+A +F  L+ GF K  K++D   ++ +M+       V  Y   + + CK         +L+EM
Sbjct:  219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEM 334          

HSP 4 Score: 36.5798 bits (83), Expect = 2.559e-11
Identity = 18/71 (25.35%), Postives = 33/71 (46.48%), Query Frame = 1
Query:  403 GMKPNSVTYSHFIYGFCKDGNFEEAKKFYRIMSNSGLSPNSSVYFTMVYFMCKGGDYETALGFCKESIAKG 615
            G  PN VTY+  ++   K     EA   Y  M   G  P++  Y ++++ + K G ++ A    ++   +G
Sbjct:  338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408          
The following BLAST results are available for this feature:
BLAST of FC930781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
PP409_ARATH1.375e-1334.15Pentatricopeptide repeat-containing protein At5g40... [more]
PP156_ARATH1.777e-1325.44Pentatricopeptide repeat-containing protein At2g16... [more]
PP218_ARATH2.299e-1327.18Pentatricopeptide repeat-containing protein At3g07... [more]
PP376_ARATH2.303e-1334.07Pentatricopeptide repeat-containing protein At5g12... [more]
PP291_ARATH2.332e-1325.38Pentatricopeptide repeat-containing protein At3g61... [more]
PP152_ARATH3.011e-1331.40Pentatricopeptide repeat-containing protein At2g15... [more]
PP161_ARATH3.035e-1324.51Pentatricopeptide repeat-containing protein At2g17... [more]
PP404_ARATH3.916e-1321.43Pentatricopeptide repeat-containing protein At5g38... [more]
PP392_ARATH3.933e-1326.92Pentatricopeptide repeat-containing protein At5g18... [more]
PP248_ARATH6.615e-1328.24Pentatricopeptide repeat-containing protein At3g22... [more]

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Properties
Property NameValue
Genbank descriptionC34109A02EF PostHarvP1 Citrus clementina cDNA clone C34109A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930781 ID=FC930781; Name=FC930781; organism=Citrus clementina; type=EST; length=701bp
GGCTTTCAACGCTTTGTTGTTGGCTCTCACGATAGCCAAAGACTACAAAG
AAGTTAAACGGGTATTTATCGAATTTCCCAAGACTTACGGAATCAAGCCG
GATTTGGATACCTACAACAGGGTAATTAAGGCGTTTTGTGAGTCCAGTGA
TTCAAGTTCTGCAGACTCGATTTTGGCTGAAATGGATAGGAAGTCGATTA
AACCAAACGCCTCGAGTTTTGGAGCTTTGGTGGCTGGGTTTTATAAGGAG
GAGAAGTATGAAGATGTGAATAAAGTCTTGCAAATGATGGAAAGATATGG
GATGAAGTCTGGGGTTAGTATGTATAATGTGAGGATTCATAGCCTTTGTA
AGTTAAGAAAGTGTGCAGAAGCTAAGGCATTGCTTGATGAGATGTTGTCT
AAGGAATGAAGCCGAATTCAGTCACTTATAGCCATTTCATTTATGGGTTC
TGCAAAGATGGGAATTTTGAAGAAGCTAAGAAGTTTTATAGGATTATGAG
TAACAGTGGGTTGTCGCCAAATAGCTCTGTATATTTTACTATGGTGTATT
TCATGTGTAAAGGTGGGGATTATGAGACAGCACTGGGCTTCTGCAAGGAG
AGTATAGCGAAGGGTTGGGTGCCTAATTTCACGACTATGAAATCATTGGT
GACTGGGCTGGCTGGTGTTTCAAAGTCAGTGAAGCAAAGAGCTTATTGGC
C
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