FC930811

Overview
NameFC930811
Unique NameFC930811
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:32..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.175e-19
Identity = 59/209 (28.23%), Postives = 98/209 (46.89%), Query Frame = 3
Query:  114 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVH--LRKPHLFPKLPPSLRETLEVYS---MELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +P ++I P+ +SP   D      +P+I++                 +   C+  GFFQ+VNHG+    L    + V+ FF + + EK++  + PG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE   + MR+NYYPPC +P + +G  PH
Sbjct:   17 IPSQFIWPEGESPT-PDAAEELHVPLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPH 224          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.453e-19
Identity = 52/200 (26.00%), Postives = 92/200 (46.00%), Query Frame = 3
Query:  123 RYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK-LDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +++R + + P ++ +    +IPVI +              + +   C+ WG FQ+V+HG+ T  +  + +    FF L  E+K ++    G   GF  +  +  E   DW ++ +  + PV  R    +P  P    +  E YS  L SLA  L+  + E + ++ E +          + +NYYP CPQP+  +GL  H
Sbjct:   18 KFVRDEDERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRH 217          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.215e-18
Identity = 49/200 (24.50%), Postives = 94/200 (47.00%), Query Frame = 3
Query:  126 YIRPDQDSPLISDDTLISQIPVIDM--QXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            ++R + + P ++ +   ++IPVI +  +             K+   C++WG FQ+VNHG+ +  + ++ +    FF L  EE  ++    G   GF  +  +  E   DW ++ +  + P+  R    +P  P   R   + YS +L  LA  L+  + E +++  + +          + +N+YP CPQP+  +GL  H
Sbjct:   19 FVRDEDERPKVAYNDFSNEIPVISLTKESMKLAAVVDEICRKIVEACEDWGIFQVVNHGVDSNLISEMTRLAREFFALPPEENVRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPLRTRDYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACVDMDQKVVVNFYPQCPQPDLTLGLKRH 218          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.586e-18
Identity = 59/222 (26.58%), Postives = 104/222 (46.85%), Query Frame = 3
Query:   90 LVKNPALV-----VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEV-------YSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            L+ NP+L+     +P+++I PD++ P I    L   +P ID+             A+    C + GFF +VNHG+S + +    + +E FF++ +  K+K  + PG+  G+  +F      KL W +  S      +     +      +L +  E        Y   + SL+  ++  +G  L +  +  R FFE+  + MR+N+YPPC  P+  +G  PH
Sbjct:   29 LIFNPSLLNLQSQIPNQFIWPDEEKPSIDIPEL--NVPFIDLSSQDSTLEAPRVIAE---ACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPH 245          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.072e-18
Identity = 55/207 (26.57%), Postives = 99/207 (47.83%), Query Frame = 3
Query:  114 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPG--DMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF--EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +P  YIR + + P ++    ++ Q+PVID+               +    +EWG FQ+VNHG+    + KL+K  + FF L  +EK+   +  G   +EG+G         K  W D    +  P      + +P  PP  RE  E Y++ L+ + + L   +   + ++  E+++    +     +++NYYPPCP+P+  +G+  H
Sbjct:   19 IPSEYIRSESEQPAVTTMQGVVLQVPVIDLGSSNNTEENLVEL--IAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAH 223          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.706e-18
Identity = 48/198 (24.24%), Postives = 92/198 (46.46%), Query Frame = 3
Query:  126 YIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            ++R + + P ++ D     +P+I +              ++   C++WG FQ+++HG+    +  + +    FF L  E+K +Y    G   GF  +  +  E   DW ++ +  + PV  R    +P+ P      +E YS  L  L+ NL+  + E + ++ E + +        + +N+YP CPQP+  +GL  H
Sbjct:   24 FVRDEDERPKVAHDRFSDAVPLISLHGIDGARRAQIRD-RVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRH 220          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.873e-18
Identity = 51/198 (25.76%), Postives = 93/198 (46.97%), Query Frame = 3
Query:  126 YIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            ++R + + P ++ +   + IPVI +              K+   C++WG FQ+V+HG+    +  + +    FF L  EEK ++    G   GF  +  +  E   DW ++ +  + P + R    +P  P    +  E YS +L +LA  L+  + E + ++ E + +        + +NYYP CPQP+  +GL  H
Sbjct:   22 FVRDEDERPKVAYNEFSNDIPVISLAGIDGEKRGEICR-KIVEACEDWGIFQVVDHGVGDDLIADMTRLAREFFALPAEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTNSRDYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACVDMDQKIVVNYYPKCPQPDLTLGLKRH 218          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.028e-17
Identity = 55/211 (26.07%), Postives = 99/211 (46.92%), Query Frame = 3
Query:  114 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHP--GDMEGFG----QAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF--EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +P  +IR + + P I+     + ++P+ID               ++      WG +Q+VNH + +  + KL+   + FF L  EEK+ Y + P    +EG+G    +     +  K  W D       P  +     +PK PPS RE  E Y+  L ++ E L   +   L ++ +E+++    +     +++NYYPPCP+P+  +G+  H
Sbjct:   17 IPAEFIRSENEQPGITTVHGKVLEVPIIDFSDPDEEKLI----VQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAH 223          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.343e-17
Identity = 68/246 (27.64%), Postives = 106/246 (43.09%), Query Frame = 3
Query:    3 YKAAAILKGFEEQKMAQIGSSLLVPCVQELVKNPALVVPDRYIRP----DQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA--KLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEG-FGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +  A+ LK F+E K            V+ LV +    VP  +  P        PL SD   +  IP ID+             A  ++     +WGFFQ++NHG+S   LEK+KK V  F   S E +K+++         +   F +      +W D FS  T+     KP     LP   R+ +  YS ++ +L + L   + E L ++   + +        M  +YYPPCP+P+  +G S H
Sbjct:   10 FDRASELKAFDETKTG----------VKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFS-CTMAPDTPKPQ---DLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQH 241          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.291e-17
Identity = 48/199 (24.12%), Postives = 93/199 (46.73%), Query Frame = 3
Query:  126 YIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA-KLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +IR + + P ++ +   ++IP+I ++              K+   C++WG FQ+V+HG+    + ++    + FF L  EEK ++    G   GF  +  +  E   DW ++ +  + P   R    +P  P       + YS +L  LA  L+  + E + ++ E + +        + +N+YP CP+P+  +GL  H
Sbjct:   22 FIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRH 220          
The following BLAST results are available for this feature:
BLAST of FC930811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GAO1A_WHEAT4.175e-1928.23Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
FL3H_ARATH5.453e-1926.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
FL3H_VITVI1.215e-1824.50Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
GAOX2_ARATH1.586e-1826.58Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FLS_PETCR2.072e-1826.57Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FL3H_HORVU2.706e-1824.24Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FL3H_DIACA7.873e-1825.76Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
FLS_MALDO1.028e-1726.07Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
ACCH3_ARATH1.343e-1727.641-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
FL3H_PETHY2.291e-1724.12Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionC34109C08EF PostHarvP1 Citrus clementina cDNA clone C34109C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930811 ID=FC930811; Name=FC930811; organism=Citrus clementina; type=EST; length=744bp
AATACAAAGCTGCAGCAATCTTGAAAGGATTTGAGGAACAAAAGATGGCC
CAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGTCAAGAA
TCCTGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCAC
CACTCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATG
CAAAGCTTACTTTCTGAAGAATCAATGGATTCTGAGCTAGCCAAGCTCGA
CTTCACATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGA
GCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAAT
CTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCATCCAGGAGATATGGA
AGGCTTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGG
CTGACCTTTTCTCCATGCTGACTCTTCCAGTTCATCTGAGGAAGCCACAC
TTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTC
AATGGAATTAAAATCCCTAGCCGAGAACCTAATATCGAANATGGGAGAAG
TGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAAATGGAGT
GCAGCAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGN
TATGGGCCTGTCGCCACATCTGATGCAGCTGCACTTACCATCTG
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