FC930811

Overview
NameFC930811
Unique NameFC930811
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:32..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.992e-17
Identity = 55/207 (26.57%), Postives = 96/207 (46.38%), Query Frame = 3
Query:  114 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQ--HPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF--EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +P  +IRP+++ P  +       +IP ID+               +    +EWG FQ+ NHG+ +  + KL+   + FF L  EEK+ Y +     D++G+G       E K  W D       P        +PK PPS R   E Y+  ++ + + L + +   L ++   ++E    +     +++NYYPPCP+P+  +G+  H
Sbjct:   19 IPAEFIRPEKEQPASTTYHGPAPEIPTIDLDDPVQDRLVR----SIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAH 221          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.103e-17
Identity = 56/212 (26.42%), Postives = 97/212 (45.75%), Query Frame = 3
Query:  114 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLP---VHLR--KPHLFPKLPPSLRETLEVY---SMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +P +++ PD + P  S D    Q+P+ID+             A   +     + GFF + NHG+  + L +    ++ FF     EK+K  +  G+  G+  +FV     KL W +  S    P   +H +  K  +  K+     +  +VY   +  + +L+  ++  +G  L ++    +EFFE   +  R+NYYP C QPE  +G  PH
Sbjct:   37 IPQQFVWPDHEKP--STDVQPLQVPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPH 246          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16
Identity = 51/162 (31.48%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  243 KLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            K++  C+ WGFF+LVNHGMST  L+ ++K  +  +  +ME++ K       +   G   V SE   LDW   F +  LP         P L    R+T++ +++EL+ LAE L+  + E L ++   +++ F   +  +   +++ YPPCP+P+   GL  H
Sbjct:   23 KINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEM-----VAAKGLDDVQSEIHDLDWESTFFLRHLP--SSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.533e-16
Identity = 54/208 (25.96%), Postives = 99/208 (47.60%), Query Frame = 3
Query:  114 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVH-LRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMR-----EFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +PD Y    +D  L S       +P+ID+               +   C  WG FQ+ NHG+ +  L+ ++      F L ++ K K  +    + G+G A + S   K  W++ F+++  P+H  RK  L+P       E +E Y   ++ LA  L+      L +++++++       F+   A +++N+YP CP+P++ MGL+ H
Sbjct:   27 LPDSYTWTPKDDLLFSASASDETLPLIDLSDIHVATL-------VGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLHDFRK--LWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAH 225          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.308e-16
Identity = 57/209 (27.27%), Postives = 89/209 (42.58%), Query Frame = 3
Query:  114 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSM-----LTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +P+ ++ P+ D+   S   L   +  + +             A++   C   GFFQ+  HG+  A           FF L + EK++  + PG + G+  A       KL W +  S         PV        L P   P  R   + Y  E+K L+  ++  +   L ++    REFF   S+ MR NYYPPCP+PE+ +G  PH
Sbjct:   42 IPEPFVWPNGDARPASAAELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPH 249          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.308e-16
Identity = 57/209 (27.27%), Postives = 89/209 (42.58%), Query Frame = 3
Query:  114 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSM-----LTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +P+ ++ P+ D+   S   L   +  + +             A++   C   GFFQ+  HG+  A           FF L + EK++  + PG + G+  A       KL W +  S         PV        L P   P  R   + Y  E+K L+  ++  +   L ++    REFF   S+ MR NYYPPCP+PE+ +G  PH
Sbjct:   42 IPEPFVWPNGDARPASAAELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPH 249          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.643e-16
Identity = 54/185 (29.19%), Postives = 93/185 (50.27%), Query Frame = 3
Query:  174 ISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            ++  PV+DM              K++  C+ WGFF+LVNHG+ST  L+ ++K  +  +  +ME++ K       +E      V SE   LDW   F +  LP         P L    R+T++ +++EL+ LAE L+  + E L ++   +++ F   +  +   +++ YPPCP+P+   GL  H
Sbjct:    1 MATFPVVDMDLINGEERAATLE-KINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQRFKEMVAAKGLEA-----VQSEIHYLDWESTFFLRHLP--SSNISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.625e-16
Identity = 64/238 (26.89%), Postives = 111/238 (46.64%), Query Frame = 3
Query:   63 SLLVPCVQELVKNPALV-----VPDRYIRPDQDSP-LISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRK------PHLFPKLPPS----LRETLEVYSMELKSLAENLISXMGEVLNIKDEE---MREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            S++V   QE+V + A++     +P ++I P ++SP  ++ + L  ++ +ID+              +    C+  GFF +VNHG+  A LE+  + ++ FF L + EK++  +  G+  G+  +F      KL W +  S         +       +L  KL       L E    Y  E+  L+  L+  +GE L I  +     R FF++  + MR+NYYP C +P   +G  PH
Sbjct:    2 SMVVQQEQEVVFDAAVLSGQTEIPSQFIWPAEESPGSVAVEEL--EVALIDVGAGAERSSVVRQVGE---ACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPH 234          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCH3_SOLLC (1-aminocyclopropane-1-carboxylate oxidase homolog OS=Solanum lycopersicum GN=ACO3 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.800e-15
Identity = 62/243 (25.51%), Postives = 100/243 (41.15%), Query Frame = 3
Query:    3 YKAAAILKGFEEQKMAQIGSSLLVPCVQELVKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA-KLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQA---FVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            Y   + LK F++ K            V+ LV +    VP  ++ P +D     +   +   PVID+Q              K+    ++WGFFQ+VNHG+ T+ L++  +    FF    E KK+Y+      +    +      S      W D       P     P    + P    E+L  +S ++K L   L+  + E L +    ++++ + +      NYYPPCPQPE  MG   H
Sbjct:   10 YDKMSELKAFDDTKAG----------VKGLVDSGITKVPQIFVLPPKDRAKKCETHFV--FPVIDLQGIDEDPIKHKEIVDKVRDASEKWGFFQVVNHGIPTSVLDRTLQGTRQFFEQDNEVKKQYYTRDTAKKVVYTSNLDLYKSSVPAASWRDTIFCYMAP----NPPSLQEFPTPCGESLIDFSKDVKKLGFTLLELLSEGLGLDRSYLKDYMDCFHLFCSCNYYPPCPQPELTMGTIQH 236          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.657e-15
Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 3
Query:  183 IPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWAD--LFSMLTLPVHLRKPHLFPKLPPSLRE---TLEVYSMELKSLAENLISXMGEVLNIKDEEM------REFFEKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            +PV+DM+              +    ++WG F LV HG+    L +++  + G F L   EK +  + PGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E+++LA+ L+      L +  E++      ++  E  +A M +N+YP CP P++ +GL  H
Sbjct:   49 VPVVDMRDPFAAEA-------VGLAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAH 229          
The following BLAST results are available for this feature:
BLAST of FC930811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
FLS_CITUN2.992e-1726.57Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
GAOX3_ARATH5.103e-1726.42Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
ACCO1_MALDO1.939e-1631.481-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
G3OX2_ARATH2.533e-1625.96Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
GAOX2_ORYSJ3.308e-1627.27Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI3.308e-1627.27Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
ACCO2_MALDO5.643e-1629.191-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
GAOX1_ORYSJ9.625e-1626.89Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
ACCH3_SOLLC2.800e-1525.511-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G3O23_WHEAT3.657e-1528.42Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]

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Properties
Property NameValue
Genbank descriptionC34109C08EF PostHarvP1 Citrus clementina cDNA clone C34109C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930811 ID=FC930811; Name=FC930811; organism=Citrus clementina; type=EST; length=744bp
AATACAAAGCTGCAGCAATCTTGAAAGGATTTGAGGAACAAAAGATGGCC
CAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGTCAAGAA
TCCTGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCAC
CACTCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATG
CAAAGCTTACTTTCTGAAGAATCAATGGATTCTGAGCTAGCCAAGCTCGA
CTTCACATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGA
GCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAAT
CTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCATCCAGGAGATATGGA
AGGCTTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGG
CTGACCTTTTCTCCATGCTGACTCTTCCAGTTCATCTGAGGAAGCCACAC
TTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTC
AATGGAATTAAAATCCCTAGCCGAGAACCTAATATCGAANATGGGAGAAG
TGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAAATGGAGT
GCAGCAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGN
TATGGGCCTGTCGCCACATCTGATGCAGCTGCACTTACCATCTG
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