FC930811

Overview
NameFC930811
Unique NameFC930811
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length744
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15504 contig Ccv1_Contig15504:32..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 46/157 (29.30%), Postives = 80/157 (50.96%), Query Frame = 3
Query:  258 CKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            C+ WGFF+ VNHG+S   ++ ++K  +  +   ME++ K       +E      V SE   LDW   F +  LPV        P L    R+ ++ ++++L+ LAE L+  + E L ++   +++ F   +  +   +++ YPPCP+PE   GL  H
Sbjct:   28 CENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLE-----CVQSEIDDLDWESTFFLRHLPVSSISE--IPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.177e-13
Identity = 45/157 (28.66%), Postives = 78/157 (49.68%), Query Frame = 3
Query:  258 CKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V +E   +DW   F +  LP+        P L    RE +  ++  L+ LAE L+  + E L ++   ++  F   +  +   +++ YPPCP+P+   GL  H
Sbjct:   28 CENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 58/224 (25.89%), Postives = 101/224 (45.09%), Query Frame = 3
Query:  132 RPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKY--------WQHPGDMEG--FGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIK----DEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH-------LMQLHLP 740
            R ++D P+ +D      +P+ID+Q            A     C+++G FQ++NHG     + +  +  + FF L  EEK+K+        ++ P + +   + +   +S E+ L W D  +    P+     + +P+ P   RE +  YS+E++ L   ++  + E L +K    D E+ +        M  NYYPPCP P   +G   H       L+Q  LP
Sbjct:   24 RAEKDVPVGND------VPIIDLQQHHHLLVQQITKA-----CQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFDNELSQI-----QMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQDLP 231          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.007e-13
Identity = 46/157 (29.30%), Postives = 78/157 (49.68%), Query Frame = 3
Query:  258 CKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F   +  +   +++ YPPCP+P+   GL  H
Sbjct:   28 CENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPV--SNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 64/228 (28.07%), Postives = 103/228 (45.18%), Query Frame = 3
Query:   81 VQELVKNPALVVPDRYIRP-DQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEG---FGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSAAMRMNYYPPCPQPEKXMGLSPH----LMQLHLP 740
            V  L    A  +PD ++ P D+  P  +D +L    P+IDM             A LD + KE+GF Q+VNHG+S   L ++      FF++  E+K +++            G AF    E+   W D+  +L  P+       +P  P  LRE +  Y+   + +A  ++  + E L ++ +            + +NYYPP P P + +GL PH    LM + LP
Sbjct:    4 VMNLTPVHASSIPDSFLLPADRLHPATTDVSL----PIIDMSRGRDEVRQ----AILD-SGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKY--WIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLP 219          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 45/164 (27.44%), Postives = 83/164 (50.61%), Query Frame = 3
Query:  243 KLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHL--FPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFFEKWSA---AMRMNYYPPCPQPEKXMGLSPH 719
            K+   C+ WGFF+LV+HG+ T FL+ +++  +  +   +E++ K       +E      V +E   +DW   F +     HL K ++   P L    R  ++ ++++L+ LAE L+  + E L ++   +++ F   +      +++ YPPCP PE   GL  H
Sbjct:   23 KIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEA-----VKTEVNDMDWESTFYLR----HLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 46/157 (29.30%), Postives = 78/157 (49.68%), Query Frame = 3
Query:  258 CKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F   +  +   +++ YPPCP+P+   GL  H
Sbjct:   28 CENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPV--SNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 46/157 (29.30%), Postives = 78/157 (49.68%), Query Frame = 3
Query:  258 CKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F   +  +   +++ YPPCP+P+   GL  H
Sbjct:   28 CENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPV--SNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.621e-13
Identity = 45/162 (27.78%), Postives = 82/162 (50.62%), Query Frame = 3
Query:  243 KLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            K+   C+ WGFF+ VNHG+S   L+K++K  +  +   MEE+ K       ++  G   + SE   +DW   F +  LPV        P L    R  ++ ++ +++ L+E L+  + E L ++   +++ F   ++ +   +++ YPPCP P+   GL  H
Sbjct:   23 KIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFK-----ESIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISD--VPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAH 177          
BLAST of FC930811 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.423e-13
Identity = 46/162 (28.40%), Postives = 78/162 (48.15%), Query Frame = 3
Query:  243 KLDFTCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISXMGEVLNIKDEEMREFF---EKWSAAMRMNYYPPCPQPEKXMGLSPH 719
            K++  C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V  E   +DW   F +  LP         P L    RE +  +   L+ LAE L+  + E L ++   ++  F   +  +   +++ YPPCP+P+   GL  H
Sbjct:   23 KINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEG-----VEVEVTDMDWESTFFLRHLP--SSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAH 177          
The following BLAST results are available for this feature:
BLAST of FC930811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
ACCO_PEA1.177e-1329.301-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_PETHY1.177e-1328.661-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
HY6H_HYONI2.007e-1325.89Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO_TOBAC2.007e-1329.301-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
IDS2_HORVU2.621e-1328.07Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
ACCO_PRUMU2.621e-1327.441-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO4_PETHY2.621e-1329.301-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_PETHY2.621e-1329.301-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
ACCO1_ARATH2.621e-1327.781-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCO2_SOLLC3.423e-1328.401-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]

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Properties
Property NameValue
Genbank descriptionC34109C08EF PostHarvP1 Citrus clementina cDNA clone C34109C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930811 ID=FC930811; Name=FC930811; organism=Citrus clementina; type=EST; length=744bp
AATACAAAGCTGCAGCAATCTTGAAAGGATTTGAGGAACAAAAGATGGCC
CAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGTCAAGAA
TCCTGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCAC
CACTCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATG
CAAAGCTTACTTTCTGAAGAATCAATGGATTCTGAGCTAGCCAAGCTCGA
CTTCACATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGA
GCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAAT
CTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCATCCAGGAGATATGGA
AGGCTTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGG
CTGACCTTTTCTCCATGCTGACTCTTCCAGTTCATCTGAGGAAGCCACAC
TTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTC
AATGGAATTAAAATCCCTAGCCGAGAACCTAATATCGAANATGGGAGAAG
TGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAAATGGAGT
GCAGCAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGN
TATGGGCCTGTCGCCACATCTGATGCAGCTGCACTTACCATCTG
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