FC930890
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HS71B_PIG (Heat shock 70 kDa protein 1B OS=Sus scrofa GN=HSPA1B PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.294e-39 Identity = 76/118 (64.41%), Postives = 96/118 (81.36%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG+ NKITITNDKGRLSK+EIE+MVQEAEKYKAEDE +++V AKNALE+YA+NM++ V+DE + K+ ADKKK+ D + I WLD+N LAE DEFE K KELE +CNPII+ +Y Sbjct: 494 STGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.690e-39 Identity = 74/118 (62.71%), Postives = 98/118 (83.05%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+ K++ DK+KI D ++ I WLD NQ AE +EFE + KELE +CNPII K+Y Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.690e-39 Identity = 74/118 (62.71%), Postives = 98/118 (83.05%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+ K++ DK+KI D ++ I WLD NQ AE +EFE + KELE +CNPII K+Y Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 1.690e-39 Identity = 74/118 (62.71%), Postives = 98/118 (83.05%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+ K++ DK+KI D ++ I WLD NQ AE +EFE + KELE +CNPII K+Y Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7C_MOUSE (Heat shock cognate 71 kDa protein OS=Mus musculus GN=Hspa8 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.690e-39 Identity = 74/118 (62.71%), Postives = 98/118 (83.05%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+ K++ DK+KI D ++ I WLD NQ AE +EFE + KELE +CNPII K+Y Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.690e-39 Identity = 74/118 (62.71%), Postives = 98/118 (83.05%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+ K++ DK+KI D ++ I WLD NQ AE +EFE + KELE +CNPII K+Y Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.690e-39 Identity = 74/118 (62.71%), Postives = 98/118 (83.05%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+ K++ DK+KI D ++ I WLD NQ AE +EFE + KELE +CNPII K+Y Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 1.690e-39 Identity = 74/118 (62.71%), Postives = 98/118 (83.05%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+ K++ DK+KI D ++ I WLD NQ AE +EFE + KELE +CNPII K+Y Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 1.690e-39 Identity = 74/118 (62.71%), Postives = 98/118 (83.05%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSK++IE+MVQEAEKYKAEDE+ + KV +KN+LE+YA+NM+ TV+DEK+ K++ DK+KI D ++ I WLD NQ AE +EFE + KELE +CNPII K+Y Sbjct: 494 STGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLY 611
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 2.208e-39 Identity = 73/118 (61.86%), Postives = 96/118 (81.36%), Query Frame = 2 Query: 2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355 +TG++NKITITNDKGRLSKD+I++MVQEAE+YK+EDE ++ +V AKNALE+Y YN++ TV+DEK+ K+ DK KI D + I WLD NQ+AE DE+E K KELE +CNPII+K+Y Sbjct: 497 STGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLY 614 The following BLAST results are available for this feature:
BLAST of FC930890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930890 ID=FC930890; Name=FC930890; organism=Citrus clementina; type=EST; length=398bpback to top |