FC930890

Overview
NameFC930890
Unique NameFC930890
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length398
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig752 contig Ccv1_Contig752:1..398. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 1.934e-35
Identity = 67/117 (57.26%), Postives = 91/117 (77.78%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+  KITITNDKGRLSK+EI++MV EAEKYKAEDE    +++AKN LE+YAY++RN++ D  +  K+D +DK+ I+ A+ + I+WLD N  A  DE+EDK KELE + NPI+AK+Y
Sbjct:  493 TGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAKDEYEDKQKELEGVANPIMAKIY 609          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.934e-35
Identity = 65/118 (55.08%), Postives = 95/118 (80.51%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            ++G++NKITITNDKGRLSK++IEKMVQEAEKYKA+D+  +++V+AKNALE+YA+N+++ V+DE +  K+   DK+ I +   Q I WL++NQLAE +E+  + K+LE +C PII K+Y
Sbjct:  495 SSGKQNKITITNDKGRLSKEDIEKMVQEAEKYKADDDAQRERVDAKNALESYAFNLKSMVEDENVKGKISDEDKRTISEKCTQVISWLENNQLAEKEEYAFQQKDLEKVCQPIITKLY 612          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.627e-35
Identity = 67/118 (56.78%), Postives = 91/118 (77.12%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            +TG++NKITITND+    + +I++MV EAEKYK+EDE +K ++EAKN LENY+YN+RNT+ DEK+  ++   DKK IED + + I WLD+NQ AE +E+E K KELE I NPI+ KMY
Sbjct:  497 STGKENKITITNDRVVCRRHDIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNTLNDEKLKDQIPEDDKKAIEDKVTETINWLDANQSAEKEEYEGKQKELEGIANPILQKMY 614          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.627e-35
Identity = 65/118 (55.08%), Postives = 95/118 (80.51%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            +TG K+KITITNDKGRL+ ++IEKMV++AE +KA+DE  ++ VE+KN LENYAY +R+T+KD+KI +KL   D+K +E+  D+AI WL +N  A  +E+E  MK+LE++C+PII+K+Y
Sbjct:  493 STGNKHKITITNDKGRLTAEQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVY 610          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 7.349e-35
Identity = 65/118 (55.08%), Postives = 95/118 (80.51%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            +TG++N ITITNDKGRLS+DEI++MV +AEKYKAEDEE++K++EA+N+LENY Y ++++++D+KI  KL PA+ +     I   ++WL+ NQLA  DE+E K KE ES+C PI++K+Y
Sbjct:  507 STGKQNHITITNDKGRLSQDEIDRMVNDAEKYKAEDEENRKRIEARNSLENYCYGVKSSLEDQKIKEKLQPAEIETCMKTITTILEWLEKNQLAGKDEYEAKQKEAESVCAPIMSKIY 624          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.349e-35
Identity = 69/117 (58.97%), Postives = 91/117 (77.78%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+ NKITITNDKGRLSK+EIE+M+ EAEKYKAEDE    +++AKN LE+YAY+++NT+ + K+  ++   DKKKIED I + I WLD+NQ AE DE+E + KELE+I NPI+   Y
Sbjct:  363 TGKSNKITITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRIQAKNGLESYAYSLKNTITEGKL--QMSDDDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIMQAAY 477          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 7.349e-35
Identity = 67/117 (57.26%), Postives = 89/117 (76.07%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG++N ITITNDKGRLSKDEIE+MV +A KY+  D+  +  +EAKN LENYAY+M+NTV D  +  KL+ +D+  +  AID A++WL+SNQ A  +E+E + KELES CNPI+ KMY
Sbjct:   72 TGKRNHITITNDKGRLSKDEIERMVNDASKYEQADKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMY 188          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 1.254e-34
Identity = 67/117 (57.26%), Postives = 91/117 (77.78%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+  KITITNDKGRLSK+EI+KMV EAEK+K EDE+   +V+AKN LE+YAY+++NT+ D ++  K+   DK+K+  AID+ I WLD++Q A  +E+EDK KELES+ NPII+  Y
Sbjct:  494 TGKTQKITITNDKGRLSKEEIDKMVSEAEKFKEEDEKEAARVQAKNQLESYAYSLKNTINDGEMKDKIGADDKEKLTKAIDETISWLDASQAASTEEYEDKRKELESVANPIISGAY 610          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 2.793e-34
Identity = 63/118 (53.39%), Postives = 95/118 (80.51%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            +TG++N ITITNDKGRLS +EI++MV +AEKYKAEDEE+KK++EA+N+LENY Y ++++++D+KI  KL P++ +    +I   ++WL+ NQLA  +E+E K KE ES+C PI++K+Y
Sbjct:  507 STGKQNHITITNDKGRLSPEEIDRMVNDAEKYKAEDEENKKRIEARNSLENYCYGVKSSLEDQKIKEKLQPSEIETCMKSITTILEWLEKNQLASKEEYESKQKEAESVCAPIMSKIY 624          
BLAST of FC930890 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 4.763e-34
Identity = 65/117 (55.56%), Postives = 91/117 (77.78%), Query Frame = 2
Query:    5 TGQKNKITITNDKGRLSKDEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTVKDEKIGSKLDPADKKKIEDAIDQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMY 355
            TG+ NKITITNDKGRLSK++IE+M+ +AEKYKAEDE    +++AKN LE+YAY+++NT+ + ++  ++   DKKK+ D ID+ I WLD+NQ AE DE+E + KELE + NPII+  Y
Sbjct:  493 TGKTNKITITNDKGRLSKEDIERMLADAEKYKAEDEAEAARIQAKNGLESYAYSLKNTISEGQL--QISEDDKKKVSDKIDEVISWLDNNQTAEKDEYESQQKELEGVANPIISAAY 607          
The following BLAST results are available for this feature:
BLAST of FC930890 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
HSP71_SCHPO1.934e-3557.26Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_XENLA1.934e-3555.08Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_BRELC5.627e-3556.78Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HS7C2_DICDI5.627e-3555.08Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP70_PLAFA7.349e-3555.08Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_PENCI7.349e-3558.97Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_LEIBR7.349e-3557.26Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP71_CANAL1.254e-3457.26Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]
HSP70_PLACB2.793e-3453.39Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP70_EMENI4.763e-3455.56Heat shock 70 kDa protein OS=Emericella nidulans G... [more]

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Properties
Property NameValue
Genbank descriptionC34110B06EF PostHarvP1 Citrus clementina cDNA clone C34110B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930890 ID=FC930890; Name=FC930890; organism=Citrus clementina; type=EST; length=398bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAAGTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTACAATATGAGGAACACTGTCAAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAG
GCAATTCAATGGCTTGATAGCAACCAGCTGGCTGAGGCCGATGAATTTGA
AGACAAGATGAAGGAGCTTGAGAGCATCTGCAATCCCATCATTGCCAAGA
TGTATNCAGGTGCTGGTGGTGATATGGGCGGTGGCATGGATGATGATG
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