FC930892

Overview
NameFC930892
Unique NameFC930892
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ENTFA (Adenine phosphoribosyltransferase OS=Enterococcus faecalis GN=apt PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15
Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            G +ARGFI G P+A+ +G  F P+RK  KLP E I   Y LEYG   + +H  A+  G+R LI DDL+A GGT+ A I L+
Sbjct:   54 GPEARGFIVGCPVAYELGVGFAPVRKKGKLPRETIEVTYDLEYGSDTLTLHKDAITPGQRVLICDDLLATGGTIKATIELV 134          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_BURVG (Adenine phosphoribosyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=apt PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.192e-15
Identity = 39/84 (46.43%), Postives = 55/84 (65.48%), Query Frame = 2
Query:  182 FLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            ++ G+ ARGFI  P +A+ +   FVP+RK  KLP +  SE Y LEYG   +E+H  A + G+R +I+DDL+A GGT+ A   LL
Sbjct:   64 YVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTCSESYDLEYGSATVEIHEDACRPGDRVIIMDDLIATGGTMMAGRNLL 147          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_SYNSC (Adenine phosphoribosyltransferase OS=Synechococcus sp. (strain CC9605) GN=apt PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            GI++RGFIFG P+A      FVP+RKP KLPGE++  +Y+LEYG   +E+   A++   R L+VDDL+A GGT +A  +L+
Sbjct:   54 GIESRGFIFGAPLASDRRLGFVPVRKPGKLPGEVVGLDYALEYGTDRLEIQADALEHSPRVLVVDDLLATGGTAAATGQLV 134          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_MYCFE (Adenine phosphoribosyltransferase OS=Mycoplasma fermentans GN=apt PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 42/106 (39.62%), Postives = 66/106 (62.26%), Query Frame = 2
Query:  176 VRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL---GSMQNHIFILIYIQMLN 484
            V  + G  ARGF+FG P A  +   F+ +RKP KLPG++IS+ Y LEYG  V+++    ++ G+   I+DD++A GGT  A I+LL   G++   + +L+ +  LN
Sbjct:   47 VDVIVGPDARGFLFGTPTAAFLKKPFIMVRKPGKLPGDVISKSYDLEYGNNVLQIQKGFIKKGQTVAIIDDVLATGGTTKAIIKLLEEQGAIVKKVILLLELVDLN 152          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_GRABC (Adenine phosphoribosyltransferase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=apt PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 2
Query:  185 LQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            L G+++RGF+   P+A  +G  FV +RK  KLPG+ I  +Y+LEYG   +E+   A++ G+R +IVDDL+A GGTL+A I LL
Sbjct:   52 LAGVESRGFLLAAPLALKLGCGFVMLRKRGKLPGKTIGLDYALEYGTDRLEIQEGAIKPGQRVVIVDDLLATGGTLAAGIDLL 134          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_EXISA (Adenine phosphoribosyltransferase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=apt PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 37/83 (44.58%), Postives = 57/83 (68.67%), Query Frame = 2
Query:  185 LQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            + G +ARGF+ G P A+A+   FVP+RK  KLP E +   Y LEYG  ++ MH  ++Q G++ +I+DDL+A GGT+ A I+++
Sbjct:   52 IAGPEARGFVVGCPAAYALELGFVPVRKEGKLPRETVRVSYGLEYGTDILTMHKDSIQPGQQVVILDDLLATGGTIEATIKMI 134          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_DROME (Adenine phosphoribosyltransferase OS=Drosophila melanogaster GN=Aprt PE=1 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 39/94 (41.49%), Postives = 59/94 (62.77%), Query Frame = 2
Query:  161 EPSPSVRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSM 442
            E +P    + G+ +RGF+F   IA  +G    P+RK  KL GE++S EY LEYG    E+   A++ G++ ++VDDL+A GG+L AA  L+G +
Sbjct:   57 ESAPEAEVIVGLDSRGFLFNLLIATELGLGCAPIRKKGKLAGEVVSVEYKLEYGIDTFELQKSAIKPGQKVVVVDDLLATGGSLVAATELIGKV 150          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_DESAD (Adenine phosphoribosyltransferase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=apt PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 40/79 (50.63%), Postives = 52/79 (65.82%), Query Frame = 2
Query:  197 KARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            +ARGFIFG P+A  +   FVP+RKP KLP E IS  Y LEYG   + MHV AV   E  L++DD++A GGT    ++L+
Sbjct:   56 EARGFIFGAPLATKLDIGFVPIRKPGKLPYETISVSYDLEYGTDNLSMHVDAVAKDENVLLIDDVLATGGTAEGMVKLV 134          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_ARTS2 (Adenine phosphoribosyltransferase OS=Arthrobacter sp. (strain FB24) GN=apt PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.087e-15
Identity = 39/88 (44.32%), Postives = 56/88 (63.64%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSMQNHI 454
            G++ARGF+     A+A     + +RK  KLP ++ISE+Y+LEYG   +E+H   + AG R LI+DD++A GGTL AA RL      H+
Sbjct:   69 GVEARGFLLAAAAAYATDTGVITVRKAGKLPRKVISEDYALEYGTATLELHTADLPAGSRVLILDDVLATGGTLGAAARLFERCGVHV 156          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_PETMO (Adenine phosphoribosyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=apt PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.056e-14
Identity = 38/79 (48.10%), Postives = 54/79 (68.35%), Query Frame = 2
Query:  197 KARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            ++RGFIF  P+A+ +   FVP+RKP KLP +  S  Y LEYG+  +EMHV A+  GE+ ++VDD++A GGT  A   L+
Sbjct:   59 ESRGFIFATPLAYLMNKEFVPIRKPGKLPYKTYSISYELEYGQTSLEMHVDAIDKGEKVIVVDDVLATGGTTKAIKELV 137          
The following BLAST results are available for this feature:
BLAST of FC930892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_ENTFA6.192e-1549.38Adenine phosphoribosyltransferase OS=Enterococcus ... [more]
APT_BURVG6.192e-1546.43Adenine phosphoribosyltransferase OS=Burkholderia ... [more]
APT_SYNSC8.087e-1549.38Adenine phosphoribosyltransferase OS=Synechococcus... [more]
APT_MYCFE8.087e-1539.62Adenine phosphoribosyltransferase OS=Mycoplasma fe... [more]
APT_GRABC8.087e-1548.19Adenine phosphoribosyltransferase OS=Granulibacter... [more]
APT_EXISA8.087e-1544.58Adenine phosphoribosyltransferase OS=Exiguobacteri... [more]
APT_DROME8.087e-1541.49Adenine phosphoribosyltransferase OS=Drosophila me... [more]
APT_DESAD8.087e-1550.63Adenine phosphoribosyltransferase OS=Desulfovibrio... [more]
APT_ARTS28.087e-1544.32Adenine phosphoribosyltransferase OS=Arthrobacter ... [more]
APT_PETMO1.056e-1448.10Adenine phosphoribosyltransferase OS=Petrotoga mob... [more]

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Properties
Property NameValue
Genbank descriptionC34110B08EF PostHarvP1 Citrus clementina cDNA clone C34110B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930892 ID=FC930892; Name=FC930892; organism=Citrus clementina; type=EST; length=740bp
GACCAAACATTTTTCCTCACTCTCTCATAATAGAAACCCTAGAATAAAAA
TCGATCAGAAAAGCCACCATTCTGCCACCGTCCAAACCATCATTCTCAAT
TGGACACCCATTTCGCATCGTTTTTCAGTCTCTTTGTCCTTTCGCCACAA
GTTGTTCAGCGAACCCTCACCTTCGGTTCGATTCTTGCAAGGTATTAAAG
CTAGGGGTTTTATATTTGGGCCTCCTATTGCATGGGCTATTGGGGCATAG
TTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAGATTATTTCCGA
AGAGTATTCCTTGGAATATGGAAAATATGTAATGGAGATGCATGTATGTG
CTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAATT
GGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGGTAGTATGCAAAACCA
TATATTTATATTGATATACATACAAATGCTGAATGCTTGCTTTTCTTCAT
ACATTCTTCTTTTTTCATACAGCTGCTGTTTTTGCTGTCGAAATGTGCAA
AGATAGCTGCTGTTGTTCTGTTCAAAAGTGCAGAAACAACAGTTGTTTCT
GCTGTTTTGAACAGGAAAAACAGTAGCTGTGTCTGAAATGCACTGATGAT
TCGTGTCTGAATTAATTTTGTTCCCATGAATCTTGCAGTCGCTTTGTAGT
TTTAATTTCATTAAGCGCTGTCAGAGATGTATTGTACTGG
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