FC930892

Overview
NameFC930892
Unique NameFC930892
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_SHEFN (Adenine phosphoribosyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 42/88 (47.73%), Postives = 63/88 (71.59%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSMQNHI 454
            G +ARGF+FG P+A  +G  FVP+RKP KLP + IS+ Y LEYGK  +E+HV A+ A ++ L++DDL+A GGT+ A ++L+  +   +
Sbjct:   61 GTEARGFLFGAPLALELGVGFVPVRKPGKLPRKTISQTYDLEYGKDTLEIHVDAINANDKVLVIDDLLATGGTIEATVKLIRELGGEV 148          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_HAEIN (Adenine phosphoribosyltransferase OS=Haemophilus influenzae GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL----GSMQNHIFIL 463
            G ++RGFIFG P+A A+G  F  +RKPKKLP E IS+ Y LEYG+  +EMHV A+  G+  LI+DDL+A GGT+ A ++L+    G++++  F++
Sbjct:   59 GTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVI 153          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_HAEIG (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittGG) GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL----GSMQNHIFIL 463
            G ++RGFIFG P+A A+G  F  +RKPKKLP E IS+ Y LEYG+  +EMHV A+  G+  LI+DDL+A GGT+ A ++L+    G++++  F++
Sbjct:   59 GTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVI 153          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_HAEIE (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain PittEE) GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL----GSMQNHIFIL 463
            G ++RGFIFG P+A A+G  F  +RKPKKLP E IS+ Y LEYG+  +EMHV A+  G+  LI+DDL+A GGT+ A ++L+    G++++  F++
Sbjct:   59 GTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGTVKHAAFVI 153          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_HAEI8 (Adenine phosphoribosyltransferase OS=Haemophilus influenzae (strain 86-028NP) GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 46/95 (48.42%), Postives = 68/95 (71.58%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL----GSMQNHIFIL 463
            G ++RGFIFG P+A A+G  F  +RKPKKLP E IS+ Y LEYG+  +EMHV A+  G+  LI+DDL+A GGT+ A ++L+    G++++  F++
Sbjct:   59 GTESRGFIFGAPVALALGLPFELVRKPKKLPRETISQSYQLEYGQDTLEMHVDAISEGDNVLIIDDLLATGGTVEATVKLVQRLGGAVKHAAFVI 153          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_CLOPS (Adenine phosphoribosyltransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            G +ARGFIFG P+A+A+G  F+P+RKP KLPG+ +  EY LEYGK  +E+H  A++ G R  IVDDL+A GGT++A  +L+
Sbjct:   54 GPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLV 134          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_CLOPE (Adenine phosphoribosyltransferase OS=Clostridium perfringens GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            G +ARGFIFG P+A+A+G  F+P+RKP KLPG+ +  EY LEYGK  +E+H  A++ G R  IVDDL+A GGT++A  +L+
Sbjct:   54 GPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLV 134          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_CLOP1 (Adenine phosphoribosyltransferase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 44/81 (54.32%), Postives = 61/81 (75.31%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL 433
            G +ARGFIFG P+A+A+G  F+P+RKP KLPG+ +  EY LEYGK  +E+H  A++ G R  IVDDL+A GGT++A  +L+
Sbjct:   54 GPEARGFIFGVPVAYALGVGFIPVRKPGKLPGDTVRVEYDLEYGKDALEIHKDAIKPGMRVAIVDDLLATGGTIAAVAKLV 134          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_CLOBB (Adenine phosphoribosyltransferase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=apt PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 46/100 (46.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:  173 SVRFLQGIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLLGSMQNHIFILIYI 472
            +V  + G +ARGFIFG P+A+A+GA FVP+RKP KLPGE IS  Y LEYG   +++H  +++ G+R  IVDDL+A GGT+    +L+      +  L ++
Sbjct:   48 NVDLIVGPEARGFIFGVPVAYALGAGFVPVRKPGKLPGETISVNYDLEYGSDSLQIHKDSIKKGQRVAIVDDLLATGGTVEGVAKLVEEAGGEVVSLAFL 147          
BLAST of FC930892 vs. ExPASy Swiss-Prot
Match: APT_AERS4 (Adenine phosphoribosyltransferase OS=Aeromonas salmonicida (strain A449) GN=apt PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.429e-19
Identity = 45/95 (47.37%), Postives = 67/95 (70.53%), Query Frame = 2
Query:  191 GIKARGFIFGPPIAWAIGA*FVPMRKPKKLPGEIISEEYSLEYGKYVMEMHVCAVQAGERALIVDDLVAIGGTLSAAIRLL----GSMQNHIFIL 463
            G +ARGFIFG P+A+A+G  FVP+RKP KLP  +I E Y+LEYG   +++H  A+  G++ L+VDDL+A GGT+ A ++L+    G + +  FI+
Sbjct:   60 GTEARGFIFGAPVAFAMGLGFVPVRKPGKLPRAVIEESYALEYGTDTLQLHTDAIVPGDKVLVVDDLLATGGTVDATVKLIRRAGGEVADAAFII 154          
The following BLAST results are available for this feature:
BLAST of FC930892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
APT_SHEFN1.860e-1947.73Adenine phosphoribosyltransferase OS=Shewanella fr... [more]
APT_HAEIN1.860e-1948.42Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEIG1.860e-1948.42Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEIE1.860e-1948.42Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_HAEI81.860e-1948.42Adenine phosphoribosyltransferase OS=Haemophilus i... [more]
APT_CLOPS1.860e-1954.32Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOPE1.860e-1954.32Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOP11.860e-1954.32Adenine phosphoribosyltransferase OS=Clostridium p... [more]
APT_CLOBB1.860e-1946.00Adenine phosphoribosyltransferase OS=Clostridium b... [more]
APT_AERS42.429e-1947.37Adenine phosphoribosyltransferase OS=Aeromonas sal... [more]

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Properties
Property NameValue
Genbank descriptionC34110B08EF PostHarvP1 Citrus clementina cDNA clone C34110B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930892 ID=FC930892; Name=FC930892; organism=Citrus clementina; type=EST; length=740bp
GACCAAACATTTTTCCTCACTCTCTCATAATAGAAACCCTAGAATAAAAA
TCGATCAGAAAAGCCACCATTCTGCCACCGTCCAAACCATCATTCTCAAT
TGGACACCCATTTCGCATCGTTTTTCAGTCTCTTTGTCCTTTCGCCACAA
GTTGTTCAGCGAACCCTCACCTTCGGTTCGATTCTTGCAAGGTATTAAAG
CTAGGGGTTTTATATTTGGGCCTCCTATTGCATGGGCTATTGGGGCATAG
TTTGTTCCTATGAGGAAACCTAAGAAGCTTCCTGGGGAGATTATTTCCGA
AGAGTATTCCTTGGAATATGGAAAATATGTAATGGAGATGCATGTATGTG
CTGTACAAGCAGGGGAGCGTGCTTTAATAGTAGACGATCTAGTTGCAATT
GGTGGGACCTTGTCTGCTGCAATCAGGCTACTTGGTAGTATGCAAAACCA
TATATTTATATTGATATACATACAAATGCTGAATGCTTGCTTTTCTTCAT
ACATTCTTCTTTTTTCATACAGCTGCTGTTTTTGCTGTCGAAATGTGCAA
AGATAGCTGCTGTTGTTCTGTTCAAAAGTGCAGAAACAACAGTTGTTTCT
GCTGTTTTGAACAGGAAAAACAGTAGCTGTGTCTGAAATGCACTGATGAT
TCGTGTCTGAATTAATTTTGTTCCCATGAATCTTGCAGTCGCTTTGTAGT
TTTAATTTCATTAAGCGCTGTCAGAGATGTATTGTACTGG
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