FC930894
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.983e-40 Identity = 92/172 (53.49%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 133 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 L WF +L+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ NVPF VLGNKID P A SE ELR LGL N TTG K+ RP+E+FMCS Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMN-TTGYTKI----EGQRPIELFMCS 172
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.590e-40 Identity = 91/172 (52.91%), Postives = 106/172 (61.63%), Query Frame = 1 Query: 133 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 + WF VLASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ +VPF++LGNKID P A SE ELR LGL N TTG ++ RP+EVFMCS Sbjct: 6 IFGWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCS 172
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_PHANO (Small COPII coat GTPase SAR1 OS=Phaeosphaeria nodorum GN=SAR1 PE=3 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40 Identity = 91/167 (54.49%), Postives = 106/167 (63.47%), Query Frame = 1 Query: 148 YGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 + VL+SLGL K AK+LFLGLDNAGKTTLLHMLK++R+ QPT +PTSEELSIG +KF FDLGGH ARR+W ER ESK N PF++LGNKID P A SE++LR LGL TTGKGKV L +RP+EVFMCS Sbjct: 4 WDVLSSLGLMNKHAKLLFLGLDNAGKTTLLHMLKNDRVAVLQPTLHPTSEELSIGNVKFTTFDLGGHAQARRLWRDYFPEVSGIVFLVDAKDHERLNESKAELDALLAMEELKNTPFVILGNKIDHPEAVSEDQLRATLGLYQ-TTGKGKVPL--EGIRPIEVFMCS 167
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40 Identity = 89/172 (51.74%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 133 LLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 L WF +L+SLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W ERF E++ VPF++LGNKID P A SE ELR LGL N TTG ++ RP+E+FMCS Sbjct: 6 LFGWFRDILSSLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLN-TTGDARI----EGQRPVELFMCS 172
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39 Identity = 90/177 (50.85%), Postives = 105/177 (59.32%), Query Frame = 1 Query: 130 FLLDWFYG----VLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 F+ +W Y VL LGL++K K++FLGLDNAGKTTLL MLKD+RL QH PT +PTSEEL+I + F FDLGGH+ ARRVW R ESK NVP L+LGNKID A SEE+LR GL TTGKG V L + N RP+EVFMCS Sbjct: 3 FIFEWIYNGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARPMEVFMCS 179
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39 Identity = 89/169 (52.66%), Postives = 104/169 (61.54%), Query Frame = 1 Query: 142 WFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 WF VLASLGLW K K+LFLGLDNAGKTTLLHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+W +RF E++ +VPF++LGNKID A SE ELR LGL N TTG ++ RP+EVFMCS Sbjct: 8 WFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCS 171
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.832e-33 Identity = 75/170 (44.12%), Postives = 98/170 (57.65%), Query Frame = 1 Query: 139 DWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 DWF L+ LGL++K+A I+F+GLDNAGK+TLL MLK+ PTQ PTS+EL +G I+FK FDLGGH++AR++W RF ES++ P L+L NK+DI A S E + G+ + TGKG NL S+ RPLEVF CS Sbjct: 5 DWFKSALSFLGLYKKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLR-SDQRPLEVFPCS 173
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.746e-20 Identity = 63/175 (36.00%), Postives = 82/175 (46.86%), Query Frame = 1 Query: 127 MFLLDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVW-XXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCS 648 MFL+DWFY + LG ++KEAKI+ +GL NAGKTTLLH+L L H PT P +E + G + FKA+DLGG Q R +W ESK P L+LG+K D + E L L + F G L +SN P ++ M S Sbjct: 1 MFLVDWFYNMFLWLGFFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRRFELG-----LNNSNNVPFDLIMTS 170
BLAST of FC930894 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.013e-13 Identity = 42/118 (35.59%), Postives = 59/118 (50.00%), Query Frame = 1 Query: 172 LWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWXXXXXXXXXXXXXXXXXXXERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDI 525 L+ K + ILFLG+DNAGKTTL++ LK + + PT +P++ + IG +K + DLGGH AR W ERF E ++ P +VL NKID+ Sbjct: 31 LFGKPSSILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVRE--AYETVLSLEKRAPVVVLMNKIDL 146 The following BLAST results are available for this feature:
BLAST of FC930894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 49
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930894 ID=FC930894; Name=FC930894; organism=Citrus clementina; type=EST; length=649bpback to top |