FC930900

Overview
NameFC930900
Unique NameFC930900
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length676
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_STRCO (Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor GN=ilvE PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26
Identity = 58/122 (47.54%), Postives = 76/122 (62.30%), Query Frame = 2
Query:  314 FGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARG-YSLYLRPTMIGT 676
            FG++FTDHM++++WT   GWH  ++VPY  L LDPAT V HYA E FEG+KAY+   G +  FRP KN  R   SS R+ +P +  D   +    LV  D +++P   G  SLYLRP MI T
Sbjct:   29 FGRHFTDHMVTIKWTEGRGWHDGQLVPYAPLSLDPATMVLHYAQEIFEGLKAYRRPDGSVATFRPEKNGARFQASSRRLGMPELPVDTFIEACDALVAQDEKWVPAHGGEESLYLRPFMIAT 150          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_STAAR (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 60/133 (45.11%), Postives = 84/133 (63.16%), Query Frame = 2
Query:  278 TPKEPMDSKDLVFGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARGYSLYLRPTMIGT 676
            T KE  D+  L FGKYFTD+MLS ++ A  GWH  +IVPY  + + PA    HY    FEG+KAYK   G + LFRP++N +RLN S AR+ +P V+   L + + +LV L+  ++P+  G SLY+RP +  T
Sbjct:   12 TLKEKPDTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYK-KDGEVALFRPDENFKRLNNSLARLEMPQVNEGELLEGLKQLVDLEREWVPEGEGQSLYIRPFVFAT 143          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_STAAW (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MW2) GN=ilvE PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 2
Query:  263 ITKTTTPKEPMDSKDLVFGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARGYSLYLRPTMIGT 676
            + +  T K+  ++  L FGKYFTD+MLS ++ A  GWH  +IVPY  + + PA    HY    FEG+KAYK   G + LFRP +N +RLN S AR+ +P VD   L + + +LV ++  +IP+  G SLY+RP +  T
Sbjct:    7 VERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYK-RDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFAT 143          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_STAAS (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MSSA476) GN=ilvE PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 2
Query:  263 ITKTTTPKEPMDSKDLVFGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARGYSLYLRPTMIGT 676
            + +  T K+  ++  L FGKYFTD+MLS ++ A  GWH  +IVPY  + + PA    HY    FEG+KAYK   G + LFRP +N +RLN S AR+ +P VD   L + + +LV ++  +IP+  G SLY+RP +  T
Sbjct:    7 VERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYK-RDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFAT 143          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_STAAN (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain N315) GN=ilvE PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 2
Query:  263 ITKTTTPKEPMDSKDLVFGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARGYSLYLRPTMIGT 676
            + +  T K+  ++  L FGKYFTD+MLS ++ A  GWH  +IVPY  + + PA    HY    FEG+KAYK   G + LFRP +N +RLN S AR+ +P VD   L + + +LV ++  +IP+  G SLY+RP +  T
Sbjct:    7 VERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYK-RDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFAT 143          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_STAAM (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ilvE PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 2
Query:  263 ITKTTTPKEPMDSKDLVFGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARGYSLYLRPTMIGT 676
            + +  T K+  ++  L FGKYFTD+MLS ++ A  GWH  +IVPY  + + PA    HY    FEG+KAYK   G + LFRP +N +RLN S AR+ +P VD   L + + +LV ++  +IP+  G SLY+RP +  T
Sbjct:    7 VERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYK-RDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFAT 143          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_STAAC (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain COL) GN=ilvE PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.480e-25
Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 2
Query:  263 ITKTTTPKEPMDSKDLVFGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARGYSLYLRPTMIGT 676
            + +  T K+  ++  L FGKYFTD+MLS ++ A  GWH  +IVPY  + + PA    HY    FEG+KAYK   G + LFRP +N +RLN S AR+ +P VD   L + + +LV ++  +IP+  G SLY+RP +  T
Sbjct:    7 VERRETLKQKPNTSQLGFGKYFTDYMLSYDYDADKGWHDLKIVPYGPIEISPAAQGVHYGQSVFEGLKAYK-RDGEVALFRPEENFKRLNNSLARLEMPQVDEAELLEGLKQLVDIERDWIPEGEGQSLYIRPFVFAT 143          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_MYCLE (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium leprae GN=ilvE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.809e-23
Identity = 52/122 (42.62%), Postives = 77/122 (63.11%), Query Frame = 2
Query:  314 FGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARG-YSLYLRPTMIGT 676
            FGKY TDHM+S+++    GWH  R++PY  + LDP+  V HYA E FEG+KAY+ + G I  FRP+ N  RL  S+ RIA+P +  +     + +L+ +D+ ++P   G  +LYLRP +  T
Sbjct:   31 FGKYHTDHMVSIDYIDGRGWHDARVIPYGPIQLDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRPDANAARLRSSARRIAIPELPDELFIDSLCQLIAVDNAWVPRVGGEEALYLRPFIFAT 152          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_MYCTU (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium tuberculosis GN=ilvE PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.030e-23
Identity = 53/146 (36.30%), Postives = 84/146 (57.53%), Query Frame = 2
Query:  254 KLTITKTTTPKEPMDSKDLV----FGKYFTDHMLSVEWTAADGWHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFIPDARG-YSLYLRPTMIGT 676
            + T+ +   P      + ++    FGKY TDHM+S+++    GWH  R++PY  + LDP+  V HYA E FEG+KAY+ + G I  FR + N  RL  S+ R+A+P +      + + +L+ +D  ++P A G  +LYLRP +  T
Sbjct:    7 QFTVLRAVNPATDAQRESMLREPGFGKYHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIPELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFAT 152          
BLAST of FC930900 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.466e-14
Identity = 43/129 (33.33%), Postives = 67/129 (51.94%), Query Frame = 2
Query:  293 MDSKDLVFGKYFTDHMLSVEWTAADG-WHAPRIVPYQNLILDPATCVFHYAFECFEGMKAYKDSTGGIRLFRPNKNMERLNKSSARIALPTVDGDALTKIIGELVKLDSRFI-PDARGYSLYLRPTMIG 673
            +D  +L F    TD+     W   DG W   ++     L +   +   HY  +CFEG+KAY+   G I LFRP  N ER+ +++ R+ +P V  +   +   E+VK +  ++ P   G +LYLRP +IG
Sbjct:    4 LDWNNLGFSYIKTDYRFIAHWK--DGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKANQDWLGPYGSGATLYLRPFLIG 130          
The following BLAST results are available for this feature:
BLAST of FC930900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
ILVE_STRCO1.748e-2647.54Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAR2.283e-2645.11Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAW1.480e-2542.75Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAS1.480e-2542.75Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAN1.480e-2542.75Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAM1.480e-2542.75Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAC1.480e-2542.75Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCLE1.809e-2342.62Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCTU4.030e-2336.30Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HAEIN4.466e-1433.33Branched-chain-amino-acid aminotransferase OS=Haem... [more]

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Properties
Property NameValue
Genbank descriptionC34110C04EF PostHarvP1 Citrus clementina cDNA clone C34110C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930900 ID=FC930900; Name=FC930900; organism=Citrus clementina; type=EST; length=676bp
GGAGCTTCGCAGGGATACTGCACTGTAGTTCTGGTGTCGAGTCATCTTTC
TAGTTGTTATTTTTTAAATCCCCATTGACTTCCTTGATATCATCATGAAG
TCGCTTCACCAATTTGCTCGCCGACAGGCATTGACCGGGCTCGCAATGCC
CCGCGTCCTCTCATCCCAGAAAATTGCCGCCAGCCAAACATGGCTGAGAG
CTTTCAGTGCCTCCAGAGCAGCCGCCTCCCAGCTCCCGGGTCTTGACGCT
TCGAAATTGACGATCACCAAGACCACCACCCCGAAGGAGCCAATGGACTC
TAAGGATCTTGTCTTTGGTAAATACTTCACAGATCATATGCTCTCTGTGG
AGTGGACGGCTGCCGATGGATGGCACGCACCTCGCATTGTTCCCTACCAG
AACCTCATCTTAGATCCTGCAACCTGTGTGTTCCACTATGCATTTGAATG
TTTCGAGGGCATGAAGGCATACAAGGACAGCACCGGCGGCATCCGTTTGT
TTCGCCCCAACAAGAACATGGAACGCCTAAACAAGTCGTCTGCGCGCATT
GCTCTTCCTACCGTGGACGGTGATGCACTAACAAAAATAATTGGAGAGCT
TGTGAAGCTCGACAGTCGGTTCATCCCGGATGCTCGCGGCTACTCCTTGT
ACCTGCGCCCTACCATGATTGGTACC
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