FC930905
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRSY (Elongation factor Tu OS=Streptococcus suis (strain 05ZYH33) GN=tuf PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ +V V VEM + L E L GDNVG ++ V +++RG V SK F +V I+ + G + P D + + +++ I G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGLQEEKSKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--SKPGSINPHTKFKGEVYILTK--EEGGRHTPFFDNYRPQFYFRTTDVTGSIKLPEGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRS2 (Elongation factor Tu OS=Streptococcus suis (strain 98HAH33) GN=tuf PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G ++ +V V VEM + L E L GDNVG ++ V +++RG V SK F +V I+ + G + P D + + +++ I G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVRVNDEIEIVGLQEEKSKAVVTGVEMFRKQLDEGLAGDNVGVLLRGVQRDEIERGQVI--SKPGSINPHTKFKGEVYILTK--EEGGRHTPFFDNYRPQFYFRTTDVTGSIKLPEGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRGC (Elongation factor Tu OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 48/166 (28.92%), Postives = 85/166 (51.20%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVK-----SVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L++ +D I EP+R +DKPL LP++DV+ I G GTV GR++ G++K + G+ E++ VEM + L E L GDNVG ++ + +++RG V +K F +V I+ + G + P + + + +++ I+ +G E+ Sbjct: 195 LMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGIVKVNDEIEI--VGIKEEIQKAVVTGVEMFRKQLDEGLAGDNVGVLLRGIQRDEIERGQVI--AKPGSINPHTKFKGEVYILTK--EEGGRHTPFFNNYRPQFYFRTTDVTGSIELPAGTEM 354
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_STRAU (Elongation factor Tu OS=Streptomyces aureofaciens GN=tuf1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 40/102 (39.22%), Postives = 59/102 (57.84%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGM---VVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFV 402 L+DA+D I P R +DKP +P++DV+ I G GTV GR+E GVLK ++ TT V +EM + L E G+NVG ++ + +D++RG V Sbjct: 194 LMDAVDEAIPTPPRDTDKPFLMPVEDVFTITGRGTVVTGRIERGVLKVNETVDIIGIKTEKTTTTVTGIEMFRKLLDEGQAGENVGLLLRGIKREDVERGQV 295
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_SORC5 (Elongation factor Tu OS=Sorangium cellulosum (strain So ce56) GN=tuf1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 55/193 (28.50%), Postives = 94/193 (48.70%), Query Frame = 1 Query: 49 FEGDNM-IERSTNLDWYKGPT--------LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 F+GDN + R +L +G LL ALD+ I EP R DKP + ++DV+ I G GTV GR+E GV+K G ++ F + + V VEM + L + GDNVG ++ V ++++RG V +K FT +V ++ + G + P + ++ +++ ++ G ++ Sbjct: 165 FDGDNAPVVRGASLPALQGDPKWEETIQQLLSALDSYIPEPVRDIDKPFLMAIEDVFSIKGRGTVATGRIERGVIKVGDEVQIIGFKDTKKSV-VTGVEMFRKLLDQGQAGDNVGCLLRGVEKEEIERGQVL--AKPGSITPHTKFTGEVYVLKK--EEGGRHTPFFTNYRPQFYIRTTDVTGTVNLPEGVKM 352
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_SHEB8 (Elongation factor Tu OS=Shewanella baltica (strain OS185) GN=tuf1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 51/163 (31.29%), Postives = 80/163 (49.08%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L +ALD+ I EP+R DKP LP++DV+ I G GTV GRVE G++K G V TT+ VEM + L E G+N G ++ D++RG V +K F S+V +++ + G + P + + +++ I+ G E+ Sbjct: 192 LANALDSYIPEPQRDIDKPFLLPIEDVFSISGRGTVVTGRVERGIVKVGDEVEIVGVRTTTKTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVL--AKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM 350
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_SALTO (Elongation factor Tu OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 109 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+ A+D +I +P+R +KP +P++DV+ I G GTV GR E GVLKP +V T +EM + L EA G+NVG ++ V +D++RG V K A F + V I++ + G + P + + +++ + G E+ Sbjct: 194 LMTAVDTSIPQPEREIEKPFLMPIEDVFTITGRGTVVTGRAERGVLKPNEEVELVGIREKSTKTTCTGIEMFRKLLDEARAGENVGLLLRGVKREDVERGMVV--IKPGTATPHTEFEATVYILSK--EEGGRHTPFFQNYRPQFYFRTTDVTGVVTLPEGTEM 353
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_OCEIH (Elongation factor Tu OS=Oceanobacillus iheyensis GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 48/164 (29.27%), Postives = 81/164 (49.39%), Query Frame = 1 Query: 109 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 L+ A+D I P+R +KP +P++DV+ I G GTV GRVE G +K G ++ T V VEM + L A GDN+G ++ V+ +D+ RG V +K NF ++V +++ + G + P + + +++ I+ G E+ Sbjct: 192 LMAAVDEYIPTPERDKEKPFMMPVEDVFSITGRGTVATGRVERGEVKVGDEVEIIGLAEDASKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREDINRGQVL--AKPGSITPHTNFKAEVYVLSK--EEGGRHTPFFSNYRPQFYFRTTDVTGVIELPEGTEM 351
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_LISW6 (Elongation factor Tu OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 1 Query: 88 DWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 DW K L++A+D+ I P+R +DKP +P++DV+ I G GTV GRVE G +K G V+ V VEM + L A GDN+G ++ VA +D++RG V +K NF ++ ++ + G + P + + + +++ + G E+ Sbjct: 184 DWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEVIGIEEESKKVVVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQVL--AKPGSITPHTNFKAETYVLTK--EEGGRHTPFFNNYRPQFYFRTTDVTGIVTLPEGTEM 351
BLAST of FC930905 vs. ExPASy Swiss-Prot
Match: EFTU_LISMO (Elongation factor Tu OS=Listeria monocytogenes GN=tuf PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 1 Query: 88 DWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL 588 DW K L++A+D+ I P+R +DKP +P++DV+ I G GTV GRVE G +K G V+ V VEM + L A GDN+G ++ VA +D++RG V +K NF ++ ++ + G + P + + + +++ + G E+ Sbjct: 184 DWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEVIGIEEESKKVVVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQVL--AKPGSITPHTNFKAETYVLTK--EEGGRHTPFFNNYRPQFYFRTTDVTGIVTLPEGTEM 351 The following BLAST results are available for this feature:
BLAST of FC930905 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930905 ID=FC930905; Name=FC930905; organism=Citrus clementina; type=EST; length=671bpback to top |