FC931060

Overview
NameFC931060
Unique NameFC931060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14610 contig Ccv1_Contig14610:16..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB14G_ARATH (ABC transporter G family member 14 OS=Arabidopsis thaliana GN=ABCG14 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.228e-32
Identity = 73/199 (36.68%), Postives = 123/199 (61.81%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            +L+ ++G   PG   A++G SG+GKTTL+  L GR +  +  G +  +G P       R +G+  Q D+  PH+T++E+L ++A LRL S +   ++   VD V+  + L    ++++G P   G+S  ++KR++I  E++ NPS++ +DEPTSGLD+  A  ++ T++     GRTVV TIHQPS  I+  FD+++L+
Sbjct:   81 ILNGITGMVCPGEFLAMLGPSGSGKTTLLSALGGRLSKTF-SGKVMYNGQPFSG-CIKRRTGFVAQDDVLYPHLTVWETLFFTALLRLPSSLTRDEKAEHVDRVIAELGLNRCTNSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAHRIVTTIKRLASGGRTVVTTIHQPSSRIYHMFDKVVLL 277          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCGC_DICDI (ABC transporter G family member 12 OS=Dictyostelium discoideum GN=abcG12 PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 83/211 (39.34%), Postives = 134/211 (63.51%), Query Frame = 1
Query:   58 EDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLS--SDVDTKKRKIFVDEVMELVELKPLRDALVG--LPG---VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            E  L +L++VSG    G L ALMG SG+GK+TL+D+LA RK+ G I G + ++G  +  E + +   Y  Q D+     T++E+L + A L+L   S+++  KR   V++++E + L     + +G  LPG   + GLS  +++R++I   LV NPS+IF+DEPTSGLD+ AA  +M+T+ N    G TV+C+IHQP  +IF  F++++++
Sbjct:   68 EKELTILNNVSGVIEKGELVALMGPSGSGKSTLLDILAQRKSTGKITGQLLVNG-KEIGEAYKKYCSYVTQEDVLLQTSTVFETLKFYADLKLPGVSEIEKIKR---VEQIIEDIGLTKRTHSKIGGVLPGGILMKGLSGGEKRRVSIGCGLVTNPSLIFLDEPTSGLDSVAALQIMKTLLNLTLKGVTVICSIHQPRPEIFALFNKVMVI 274          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG2_RAT (ATP-binding cassette sub-family G member 2 OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.603e-32
Identity = 75/200 (37.50%), Postives = 124/200 (62.00%), Query Frame = 1
Query:   70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            ++L  ++G  +PG L A++G +G GK++L+DVLA RK    + GD+ I+G P+    F   SGY  Q D+    +T+ E+L +SA LRL   + T ++   ++ +++ + L  + D+ VG     G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+
Sbjct:   61 EILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPRGLSGDVLINGAPQPAN-FKCSSGYVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGTQFTRGISGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL 258          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG2_MACMU (ATP-binding cassette sub-family G member 2 OS=Macaca mulatta GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32
Identity = 74/200 (37.00%), Postives = 125/200 (62.50%), Query Frame = 1
Query:   70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            ++L +++G  +PG L A++G +G GK++L+DVLA RK    + GD+ I+G   +   F   SGY  Q D+    +T+ E+L +SA LRL + +   ++   ++ V++ + L  + D+ VG   + G+S  +RKR +I +EL+ +PSI+F+DEPT+GLD+  A  V+  ++     GRT++ +IHQP   IF+ FD L L+
Sbjct:   62 EILSNINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPSGLSGDVLING-ALRPTNFKCNSGYVVQDDVVMGTLTVRENLQFSAALRLPTTMTNHEKNERINRVIQELGLDKVADSKVGTQFIRGVSGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFKLFDSLTLL 259          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32
Identity = 76/201 (37.81%), Postives = 125/201 (62.19%), Query Frame = 1
Query:   70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI-EGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            +LL  ++G   PG + A+MG SG+GK+TL+D LAGR     +  G++ ++G  KK      +  Y  Q D+    +T+ E++ YSA LRL SD+  ++    V+  +  + L+   D ++G     G+S  +RKR++IA+E++  P I+F+DEPTSGLD+ +A  V++ +RN    GRTV+ ++HQPS ++F  FD+L L+
Sbjct:   44 RLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVVMTGNLLLNG--KKARLDYGLVAYVTQEDVLLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGLQDCSDRVIGNWHARGVSGGERKRVSIALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGRTVISSVHQPSSEVFALFDDLFLL 242          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.572e-32
Identity = 81/202 (40.10%), Postives = 127/202 (62.87%), Query Frame = 1
Query:   70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI-EGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLM 669
            +LL  ++G   PG + A+MG SG+GK+TL+D LAGR     I  G++ ++G  KK      +  Y  Q DI    +T+ E++ YSA LRLSSD+  ++    V+  +  + L+   D ++G     G+S  +RKR+++A+E++  P I+F+DEPTSGLD+ +A  V++ +RN   D GRTVV +IHQPS ++F  FD+L L+
Sbjct:   43 RLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGNLLLNG--KKARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGGRTVVSSIHQPSSEVFALFDDLFLL 242          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB20G_ARATH (ABC transporter G family member 20 OS=Arabidopsis thaliana GN=ABCG20 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.665e-32
Identity = 70/199 (35.18%), Postives = 123/199 (61.81%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            LL+ +SG  R G + A++G SG+GK+TL+D LA R +   + GDI ++G   +      +S Y  Q D+  P +T+ E+L++SA  RL S +  KK+K  V  +++ + L+     ++G  G  G+S  +R+R++I  +++ +P I+F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  I    D+L+ +
Sbjct:  126 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRISKESLRGDITLNGEVLESSLHKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPSSLSKKKKKARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDKLIFL 324          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: WHITE_LUCCU (Protein white OS=Lucilia cuprina GN=W PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 6.092e-32
Identity = 78/210 (37.14%), Postives = 124/210 (59.05%), Query Frame = 1
Query:   52 VGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKI---SGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            + + R  L+ +V G   PG L A+MG SGAGKTTL++ LA R   G       +   +G+P   +       Y +Q D+    +T  E L++ A +R+   +  K++   VD+V++ + L   ++ ++G+PG V GLS  +RKRL  A E + +P ++  DEPTSGLD+  AA V++ ++     G+TV+ TIHQPS ++FE FD++LLM
Sbjct:   94 IPKPRKHLIKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSARGVQISPSSVRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQATVRMPRTMTQKQKLQRVDQVIQDLSLIKCQNTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAASVVQVLKKLSQRGKTVILTIHQPSSELFELFDKILLM 303          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: WHITE_ANOGA (Protein white OS=Anopheles gambiae GN=w PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.092e-32
Identity = 81/211 (38.39%), Postives = 120/211 (56.87%), Query Frame = 1
Query:   64 RLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS--------GYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            R  LL +V+G  + G L A+MG SGAGKTTL++ LA R   G     +KIS        G P   E       Y +Q D+  P +T  E LL+ A LR+  DV    ++  V EV++ + L    D ++G PG + GLS  +RKRL  A E + +P ++  DEPTSGLD+  A  V++ ++     G+T++ TIHQPS +++  FD++LL+
Sbjct:  112 RKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPG-----VKISPNAVRALNGVPVNAEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDKILLV 317          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: WHT1_CAEEL (ABC transporter ATP-binding protein/permease wht-1 OS=Caenorhabditis elegans GN=wht-1 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32
Identity = 79/203 (38.92%), Postives = 121/203 (59.61%), Query Frame = 1
Query:   70 QLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-TGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDV-DTKKRKIFVDEVMELVELKPLRDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            ++LH+VSG    G L A++G SGAGKTTLM+VL  R  T   ++G I I G    +     +S + +Q D+    +T  E L + A LR+        +R++ V++V+  + LK   D ++G+P  + GLS  ++KRL+ A E++  P I+F DEPTSGLDA  A  V++ +R+  D G TV+ TIHQPS  ++  F+ + LM
Sbjct:    8 EILHNVSGMAESGKLLAILGSSGAGKTTLMNVLTSRNLTNLDVQGSILIDGRRANKWKIREMSAFVQQHDMFVGTMTAREHLQFMARLRMGDQYYSDHERQLRVEQVLTQMGLKKCADTVIGIPNQLKGLSCGEKKRLSFASEILTCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTVIITIHQPSSHVYSLFNNVCLM 210          
The following BLAST results are available for this feature:
BLAST of FC931060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
AB14G_ARATH1.228e-3236.68ABC transporter G family member 14 OS=Arabidopsis ... [more]
ABCGC_DICDI1.603e-3239.34ABC transporter G family member 12 OS=Dictyosteliu... [more]
ABCG2_RAT1.603e-3237.50ATP-binding cassette sub-family G member 2 OS=Ratt... [more]
ABCG2_MACMU3.572e-3237.00ATP-binding cassette sub-family G member 2 OS=Maca... [more]
AB15G_ARATH3.572e-3237.81ABC transporter G family member 15 OS=Arabidopsis ... [more]
AB12G_ARATH3.572e-3240.10ABC transporter G family member 12 OS=Arabidopsis ... [more]
AB20G_ARATH4.665e-3235.18ABC transporter G family member 20 OS=Arabidopsis ... [more]
WHITE_LUCCU6.092e-3237.14Protein white OS=Lucilia cuprina GN=W PE=2 SV=2[more]
WHITE_ANOGA6.092e-3238.39Protein white OS=Anopheles gambiae GN=w PE=2 SV=1[more]
WHT1_CAEEL7.957e-3238.92ABC transporter ATP-binding protein/permease wht-1... [more]

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Properties
Property NameValue
Genbank descriptionC34101A02EF PostHarvP1 Citrus clementina cDNA clone C34101A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931060 ID=FC931060; Name=FC931060; organism=Citrus clementina; type=EST; length=669bp
GACCAGATGAATTACTACGTCGATATGCCAGCAGAAATGAAAACTGAAGG
AGTTGGAGAAGATCGTCTTCAACTGTTACACAGTGTCAGTGGTGCATTCA
GACCAGGAGTACTGACAGCATTAATGGGTGTAAGTGGTGCAGGGAAGACA
ACTCTAATGGATGTATTGGCAGGAAGGAAGACCGGAGGATACATCGAAGG
AGACATTAAGATTTCTGGTTACCCCAAAAAACAAGAAACGTTTGCTCGTG
TCAGTGGTTATTGTGAACAGACTGACATTCATTCTCCTCATGTTACTCTC
TATGAATCTCTTCTCTACTCAGCATGGCTTCGTCTTTCTTCAGACGTCGA
TACAAAAAAACGAAAGATATTCGTTGATGAAGTTATGGAGTTGGTTGAGC
TTAAACCATTGAGGGATGCTTTGGTTGGCCTTCCAGGAGTAAATGGTCTT
TCAACAGAGCAAAGGAAGAGATTGACAATTGCTGTAGAATTGGTTGCTAA
CCCTTCAATCATCTTCATGGACGAGCCAACATCTGGCCTTGATGCTAGAG
CAGCTGCTATTGTCATGCGTACGGTTAGAAATACAGTGGATACAGGGAGA
ACGGTTGTGTGCACAATTCATCAGCCAAGCATAGACATTTTTGAAGCATT
TGATGAGCTTTTGTTAATG
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