FC931060

Overview
NameFC931060
Unique NameFC931060
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14610 contig Ccv1_Contig14610:16..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: WHITE_DROME (Protein white OS=Drosophila melanogaster GN=w PE=1 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 7.957e-32
Identity = 79/206 (38.35%), Postives = 120/206 (58.25%), Query Frame = 1
Query:   64 RLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYI---EGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            R  LL +V G   PG L A+MG SGAGKTTL++ LA R   G      G   ++G P   +       Y +Q D+    +T  E L++ A +R+   +  ++R   VD+V++ + L   +  ++G+PG V GLS  +RKRL  A E + +P ++  DEPTSGLD+  A  V++ ++     G+TV+ TIHQPS ++FE FD++LLM
Sbjct:  109 RKHLLKNVCGVAYPGELLAVMGSSGAGKTTLLNALAFRSPQGIQVSPSGMRLLNGQPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHLTYRQRVARVDQVIQELSLSKCQHTIIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFTAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLM 314          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31
Identity = 64/199 (32.16%), Postives = 124/199 (62.31%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            LL+++SG  R G + A++G SG+GK+TL+D LA R   G ++G +K++G   +      +S Y  Q D+  P +T+ E+L+++A  RL   +   K+K+ V  +++ + ++     ++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  +    D L+ +
Sbjct:  109 LLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFL 307          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.949e-31
Identity = 65/210 (30.95%), Postives = 128/210 (60.95%), Query Frame = 1
Query:   43 TEGVGEDRLQ-LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            +EG+   + + LL+ ++G  R G + A++G SG+GK+TL+D LA R   G ++G++ ++G     +    +S Y  Q D+  P +T+ E+L+++A  RL   +   K+ + V  +++ + L+   + ++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A  V++ ++    +G  V+ T+HQPS  +    D LL +
Sbjct:   97 SEGIFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSLKGNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLKRIAQSGSMVIMTLHQPSYRLLRLLDRLLFL 306          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.949e-31
Identity = 62/199 (31.16%), Postives = 123/199 (61.81%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            LL ++SG  R G + A++G SG+GK+TL+D LA R   G ++G + ++G   +      +S Y  Q D+  P +T+ E+L+++A  RL   +   K+K+ V  +++ + ++     ++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A +V++ ++   ++G  ++ +IHQPS  +    D L+ +
Sbjct:  107 LLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAESGSIIIMSIHQPSHRVLSLLDRLIFL 305          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.949e-31
Identity = 76/212 (35.85%), Postives = 129/212 (60.85%), Query Frame = 1
Query:   37 MKTEGVGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            M T G GE +  +L  ++G   PG LTALMG SG+GK+T++D LA R     ++ G + ++G  +K +     + Y  Q D     +T+ E++ YSA +RL   +   +++  V+  +  + L+   D ++G   + G+S  +++R++IA+E++  P ++F+DEPTSGLD+ +A  V +T+R     GRTV+ +IHQPS ++FE FD L L+
Sbjct:   58 MVTMGDGETQ-NVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANAFLSGTVLLNG--RKTKLSFGTAAYVTQDDNLIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYLL 266          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.157e-31
Identity = 79/206 (38.35%), Postives = 121/206 (58.74%), Query Frame = 1
Query:   64 RLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKI---SGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            R  LL + SG   PG L A+MG SGAGKTTL++  A R + G       I   +G+P   +       Y +Q D+    +T  E L++ A +R+   +  K++   VD+V++ + L   ++ L+G+PG V GLS  +RKRL  A E + +P ++  DEPTSGLD+  A  V++ ++     G+TV+ TIHQPS ++FE FD++LLM
Sbjct:  100 RKHLLKNDSGVAYPGELLAVMGSSGAGKTTLLNASAFRSSKGVQISPSTIRMLNGHPVDAKEMQARCAYVQQDDLFIGSLTAREHLIFQAMVRMPRHMTQKQKVQRVDQVIQDLSLGKCQNTLIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILLM 305          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.157e-31
Identity = 67/214 (31.31%), Postives = 132/214 (61.68%), Query Frame = 1
Query:   28 PAEMKTEGVGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            PA++KT         LL+ ++G  + G + A++G SGAGK+TL+D LAG+   G ++G + ++G   +      +S Y  Q D+  P +T+ E+L+++A  RL   +   K++  V+ +++ + L  +++ ++G  G  G+S  +R+R++I  +++ +P ++F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  I E  D ++++
Sbjct:   45 PAKIKT---------LLNGITGEAKEGEILAILGASGAGKSTLIDALAGQIAEGSLKGTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTTVKNTVIGDEGHRGVSGGERRRVSIGTDIIHDPIVLFLDEPTSGLDSTSAFMVVQVLKKIARSGSIVIMSIHQPSGRIMEFLDRVIVL 249          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.736e-31
Identity = 76/200 (38.00%), Postives = 123/200 (61.50%), Query Frame = 1
Query:   73 LLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLM 669
            +L  V+G   PG   A++G SG+GK+TL++ +AGR  G  + G I I+     ++T  R +G+  Q D+  PH+T+ E+L++ A LRL   +    +    + V+  + L    + +VG   + G+S  +RKR++IA EL+ NPS++ +DEPTSGLDA AA  +++T+       G+TVV +IHQPS  +F+ FD +LL+
Sbjct:   83 ILSGVTGMISPGEFMAVLGPSGSGKSTLLNAVAGRLHGSNLTGKILINDGKITKQTLKR-TGFVAQDDLLYPHLTVRETLVFVALLRLPRSLTRDVKLRAAESVISELGLTKCENTVVGNTFIRGISGGERKRVSIAHELLINPSLLVLDEPTSGLDATAALRLVQTLAGLAHGKGKTVVTSIHQPSSRVFQMFDTVLLL 281          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG4_DICDI (ABC transporter G family member 4 OS=Dictyostelium discoideum GN=abcG4 PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.797e-31
Identity = 84/210 (40.00%), Postives = 127/210 (60.48%), Query Frame = 1
Query:   58 EDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVG--LPG---VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            E  L +L +VSG    G + ALMG SG+GK+TL+D+LA RK+ G I G I ++G  +  E +     Y  Q ++     T+YE+L + A LRL    DT+K  I + +V++ V L    ++ +G  LPG   V GLS  ++KR++I   LV NPS++F+DEPTSGLD+  +  VM+ +   T   G TVVC++HQP  +IF  F  ++++
Sbjct:  230 EKELTILSNVSGIVEKGEMVALMGPSGSGKSTLLDILANRKSTGTITGKILVNG-KEIGEAYKMFCSYVTQEEVFLETSTVYETLKFHADLRLPDMTDTEK-DIRIKQVLKDVGLDRKLNSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNSLKVMKVLLELTKMKGVTVVCSVHQPRPEIFYLFSNIMVV 437          
BLAST of FC931060 vs. ExPASy Swiss-Prot
Match: ABCG7_DICDI (ABC transporter G family member 7 OS=Dictyostelium discoideum GN=abcG7 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.501e-30
Identity = 83/215 (38.60%), Postives = 129/215 (60.00%), Query Frame = 1
Query:   43 TEGVGEDRLQLLHSVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKKQETFARVSGYCEQTDIHSPHVTLYESLLYSAWLRLSSDVDTKKRKIFVDEVMELVELKPLRDALVG--LPG---VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRN-TVDTGRTVVCTIHQPSIDIFEAFDELLLM 669
            T G  E  + +L +VSG      +  L G SG+GK+TL+D+LA RK+ G I G I ++G  +  + + +   Y  Q +I     T+ E+L + A LRL    D  K K+ V++V++ + L     + +G  LPG   V GLS  ++KR++I   LV NPS++F+DEPTSGLD+  A  VM+ + N TV  G TV+C+IHQP  +I+  F+++++M
Sbjct:  246 TNGKIEKEITILSNVSGIIEKSEMVGLFGPSGSGKSTLLDILANRKSTGTISGKILVNG-KEIGDAYKKYCSYVTQDEILLQTSTVEETLKFHADLRLPGLSDQDKWKV-VEQVIKDIGLTKKSKSKIGGILPGGMIVKGLSGGEKKRVSIGCALVTNPSLLFLDEPTSGLDSLNALKVMKVLMNLTVIKGVTVICSIHQPRPEIYHLFNKIMIM 458          
The following BLAST results are available for this feature:
BLAST of FC931060 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
WHITE_DROME7.957e-3238.35Protein white OS=Drosophila melanogaster GN=w PE=1... [more]
AB1G_ARATH1.357e-3132.16ABC transporter G family member 1 OS=Arabidopsis t... [more]
AB6G_ARATH3.949e-3130.95ABC transporter G family member 6 OS=Arabidopsis t... [more]
AB16G_ARATH3.949e-3131.16ABC transporter G family member 16 OS=Arabidopsis ... [more]
AB11G_ARATH3.949e-3135.85ABC transporter G family member 11 OS=Arabidopsis ... [more]
WHITE_CERCA5.157e-3138.35Protein white OS=Ceratitis capitata GN=W PE=2 SV=1[more]
AB17G_ARATH5.157e-3131.31ABC transporter G family member 17 OS=Arabidopsis ... [more]
AB25G_ARATH6.736e-3138.00ABC transporter G family member 25 OS=Arabidopsis ... [more]
ABCG4_DICDI8.797e-3140.00ABC transporter G family member 4 OS=Dictyostelium... [more]
ABCG7_DICDI1.501e-3038.60ABC transporter G family member 7 OS=Dictyostelium... [more]

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Properties
Property NameValue
Genbank descriptionC34101A02EF PostHarvP1 Citrus clementina cDNA clone C34101A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931060 ID=FC931060; Name=FC931060; organism=Citrus clementina; type=EST; length=669bp
GACCAGATGAATTACTACGTCGATATGCCAGCAGAAATGAAAACTGAAGG
AGTTGGAGAAGATCGTCTTCAACTGTTACACAGTGTCAGTGGTGCATTCA
GACCAGGAGTACTGACAGCATTAATGGGTGTAAGTGGTGCAGGGAAGACA
ACTCTAATGGATGTATTGGCAGGAAGGAAGACCGGAGGATACATCGAAGG
AGACATTAAGATTTCTGGTTACCCCAAAAAACAAGAAACGTTTGCTCGTG
TCAGTGGTTATTGTGAACAGACTGACATTCATTCTCCTCATGTTACTCTC
TATGAATCTCTTCTCTACTCAGCATGGCTTCGTCTTTCTTCAGACGTCGA
TACAAAAAAACGAAAGATATTCGTTGATGAAGTTATGGAGTTGGTTGAGC
TTAAACCATTGAGGGATGCTTTGGTTGGCCTTCCAGGAGTAAATGGTCTT
TCAACAGAGCAAAGGAAGAGATTGACAATTGCTGTAGAATTGGTTGCTAA
CCCTTCAATCATCTTCATGGACGAGCCAACATCTGGCCTTGATGCTAGAG
CAGCTGCTATTGTCATGCGTACGGTTAGAAATACAGTGGATACAGGGAGA
ACGGTTGTGTGCACAATTCATCAGCCAAGCATAGACATTTTTGAAGCATT
TGATGAGCTTTTGTTAATG
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