FC931064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y3295_LEPIC (UPF0189 protein LIC_13295 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=LIC_13295 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.657e-28 Identity = 68/126 (53.97%), Postives = 86/126 (68.25%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY-GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN +LGGGG DGAIHRA GPE+LE CY++ E C GEA IT +L A +IHTVGPI+ G N + L +AYKNSL LAK ++++ IAFP IS G+Y +P E AA IAI +V +F Sbjct: 21 VNAANSSLLGGGGVDGAIHRAGGPEILEECYKIREKQG--ECKVGEAVITTAGRLNAKFIIHTVGPIWSGGNKNEDELLSNAYKNSLLLAKNHSLKTIAFPNISTGIYHFPKERAAKIAIQSVTKF 144
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: YMDB_ECOLI (UPF0189 protein ymdB OS=Escherichia coli (strain K12) GN=ymdB PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY-GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN ++GGGG DGAIHRAAGP LL+AC +V + CPTG A IT LPA V+HTVGP++ G N + L+ AY NSL L AN+ +AFPAIS G+Y YP AA IA+ TV EF Sbjct: 21 VNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGD--CPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEF 144
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: YMDB_ECOL6 (UPF0189 protein ymdB OS=Escherichia coli O6 GN=ymdB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY-GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN ++GGGG DGAIHRAAGP LL+AC +V + CPTG A IT LPA V+HTVGP++ G N + L+ AY NSL L AN+ +AFPAIS G+Y YP AA IA+ TV EF Sbjct: 21 VNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGD--CPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEF 144
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: YMDB_ECO57 (UPF0189 protein ymdB OS=Escherichia coli O157:H7 GN=ymdB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 68/126 (53.97%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY-GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN ++GGGG DGAIHRAAGP LL+AC +V + CPTG A IT LPA V+HTVGP++ G N + L+ AY NSL L AN+ +AFPAIS G+Y YP AA IA+ TV EF Sbjct: 21 VNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGD--CPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEF 144
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: MACD2_HUMAN (MACRO domain-containing protein 2 OS=Homo sapiens GN=MACROD2 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28 Identity = 67/127 (52.76%), Postives = 85/127 (66.93%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINP--EASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN +LGGGG DG IHRAAGP LL C + C TG A+IT G+ LPA +VIHTVGPI IN + L + YK+SL L K NNI+ +AFP IS G+Y +P+E AA IA++T+KE+ Sbjct: 88 VNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNG------CDTGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYKSSLKLVKENNIRSVAFPCISTGIYGFPNEPAAVIALNTIKEW 208
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: YMDB_SALTY (UPF0189 protein ymdB OS=Salmonella typhimurium GN=ymdB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27 Identity = 67/126 (53.17%), Postives = 85/126 (67.46%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASL-RSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN ++GGGG DGAIHRAAGP LL+AC + + C TG A ITP KL A VIHTVGP++ + EA L AY+N L LA+AN+ + IAFPAIS G+Y YP +AA +A+ TV +F Sbjct: 21 VNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG--ECQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSIAFPAISTGVYGYPRAQAAEVAVRTVSDF 144
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: YMDB_SALTI (UPF0189 protein ymdB OS=Salmonella typhi GN=ymdB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27 Identity = 67/126 (53.17%), Postives = 85/126 (67.46%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASL-RSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN ++GGGG DGAIHRAAGP LL+AC + + C TG A ITP KL A VIHTVGP++ + EA L AY+N L LA+AN+ + IAFPAIS G+Y YP +AA +A+ TV +F Sbjct: 21 VNAANASLMGGGGVDGAIHRAAGPALLDACKLIRQQQG--ECQTGHAVITPAGKLSAKAVIHTVGPVWRGGEHQEAELLEEAYRNCLLLAEANHFRSIAFPAISTGVYGYPRAQAAEVAVRTVSDF 144
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y3408_LACPL (UPF0189 protein lp_3408 OS=Lactobacillus plantarum GN=lp_3408 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27 Identity = 68/127 (53.54%), Postives = 88/127 (69.29%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY-GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFA 698 VN+AN +LGGGG DGAIHRAAGP LL AC P G C TGEA+ITPGF+LPA +VIHT GP++ G N L ++Y+NSL+LA N+ Q +AFP+IS G+Y +P AA +A+ T++ A Sbjct: 20 VNAANTSLLGGGGVDGAIHRAAGPALLAACR--PLHG----CATGEAKITPGFRLPAKYVIHTPGPVWQGGQHNELQLLANSYRNSLNLAAENHCQTVAFPSISTGVYHFPLSIAAPLALKTLQATA 140
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: MACD2_MOUSE (MACRO domain-containing protein 2 OS=Mus musculus GN=Macrod2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27 Identity = 65/127 (51.18%), Postives = 84/127 (66.14%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINP--EASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEF 695 VN+AN +LGGGG DG IHRAAGP LL C + C TG A+IT G+ LPA +VIHTVGPI IN + L + Y++SL L K NN++ +AFP IS G+Y +P+E AA IA+ T+KE+ Sbjct: 88 VNAANASLLGGGGVDGCIHRAAGPCLLAECRNLNG------CETGHAKITCGYDLPAKYVIHTVGPIARGHINGSHKEDLANCYQSSLKLVKENNLRSVAFPCISTGIYGFPNEPAAVIALGTIKEW 208
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y7730_RHILO (UPF0189 protein mll7730 OS=Rhizobium loti GN=mll7730 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 65/123 (52.85%), Postives = 82/123 (66.67%), Query Frame = 3 Query: 321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASL-RSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTV 686 VN+AN +LGGGG DGAIHRAAG EL C + C G+A+IT G+KLPA H+IHTVGP++ EA L S Y++SL LA AN+ + +AFPAIS G+Y YP +EA IA+ TV Sbjct: 24 VNAANTLLLGGGGVDGAIHRAAGRELEVECRMLNG------CKVGDAKITKGYKLPARHIIHTVGPVWQGGGKGEAELLASCYRSSLELAAANDCRSVAFPAISTGVYRYPKDEATGIAVGTV 140 The following BLAST results are available for this feature:
BLAST of FC931064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931064 ID=FC931064; Name=FC931064; organism=Citrus clementina; type=EST; length=708bpback to top |