FC931064

Overview
NameFC931064
Unique NameFC931064
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15262 contig Ccv1_Contig15262:1..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y1216_STRP1 (UPF0189 protein SPy_1216/M5005_Spy0930 OS=Streptococcus pyogenes serotype M1 GN=SPy_1216 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 3
Query:  321 VNSANEKMLG----GGGC-DGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGP--IYGVTINPEAS--LRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTV 686
            VN+AN ++LG      GC D AIH  AG  L  AC  +     G +   G+A++T  + LPAS++IHTVGP    G  ++P  +  L   Y++SL LA    +  +AF +IS G + +P +EAA IAI TV
Sbjct:  102 VNAANSELLGCFSPNHGCIDNAIHTFAGSRLRLACQAIMTEQ-GRKEAIGQAKLTSAYHLPASYIIHTVGPRITKGHHVSPIRADLLARCYRSSLDLAVKAGLTSLAFCSISTGEFGFPKKEAAQIAIKTV 231          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y1168_STRP8 (UPF0189 protein spyM18_1168 OS=Streptococcus pyogenes serotype M18 GN=spyM18_1168 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 3
Query:  321 VNSANEKMLG----GGGC-DGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGP--IYGVTINPEAS--LRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTV 686
            VN+AN ++LG      GC D AIH  AG  L  AC  +     G +   G+A++T  + LPAS++IHTVGP    G  ++P  +  L   Y++SL LA    +  +AF +IS G + +P +EAA IAI TV
Sbjct:  102 VNAANSELLGCFIPNHGCIDNAIHTFAGSRLRLACQAIMTEQ-GRKEAIGQAKLTSAYHLPASYIIHTVGPRITKGRHVSPIRADLLARCYRSSLDLAVKAGLTSLAFCSISTGEFGFPKKEAAQIAIKTV 231          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: PAR14_MOUSE (Poly [ADP-ribose] polymerase 14 OS=Mus musculus GN=Parp14 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 47/126 (37.30%), Postives = 70/126 (55.56%), Query Frame = 3
Query:  321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIY--GVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKE 692
            VN+ANE +    G   A+ +AAGPEL   C ++ + G G+  P G A I+   KLP  HVIH VGP +     +   + L+   + SLSLA+ +  + IA PA+S G++ +P E      +S +KE
Sbjct:  831 VNAANENLKHISGLAQALSKAAGPELQTECDQIVKEG-GVVLP-GNAVISKAGKLPCHHVIHAVGPRWKGDKVLECVSLLKKVVRQSLSLAEEHRCRSIAMPAVSAGIFDFPLELCVANIVSAIKE 954          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y1252_SULAC (UPF0189 protein Saci_1252 OS=Sulfolobus acidocaldarius GN=Saci_1252 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 50/129 (38.76%), Postives = 64/129 (49.61%), Query Frame = 3
Query:  321 VNSANEKMLGGGGCDGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDF 707
            VN+AN  +  GGG   AI R+ G  + E           +  P GE  +T   KL A +VIH VGP YG  I  +  L SA + SL  A    +  IA PAIS G+Y YP+E  A I    +KE+   F
Sbjct:   29 VNAANSYLSHGGGVALAIVRSGGYIIQEESDEYVRRNGPV--PVGEVAVTTAGKLKARYVIHAVGPRYG--IEGDDKLESAIRRSLEKADELKLSSIALPAISTGIYGYPYEICARIMSKVMKEYKPKF 153          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y322_STAAR (UPF0189 protein SAR0322 OS=Staphylococcus aureus (strain MRSA252) GN=SAR0322 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 48/136 (35.29%), Postives = 74/136 (54.41%), Query Frame = 3
Query:  321 VNSANEKMLG----GGGC-DGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGP-IYGVTINP--EASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704
            VN+AN + LG       C D  IH  AG ++   C  +     G     G+A+IT G+ LPA ++IHTVGP I  + ++   +  L   Y + L LA   ++ +IAF  IS G++ +P +EAA IA+ TV+ +  +
Sbjct:  103 VNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQ-GRNEGVGKAKITRGYNLPAKYIIHTVGPQIRRLPVSKLNQDLLAKCYLSCLKLADQQSLNHIAFCCISTGVFAFPQDEAAEIAVRTVESYLKE 237          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y302_STAAW (UPF0189 protein MW0302 OS=Staphylococcus aureus (strain MW2) GN=MW0302 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 3
Query:  321 VNSANEKMLG----GGGC-DGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYG---VTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704
            VN+AN + LG       C D  IH  AG ++   C  +     G     G+A+IT G+ LPA ++IHTVGP      V+   +  L   Y + L LA  +++ ++AF  IS G++ +P +EAA IA+ TV+ +  +
Sbjct:  103 VNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQ-GRNEGVGKAKITRGYNLPAKYIIHTVGPQIRRLPVSKMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKE 237          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y302_STAAS (UPF0189 protein SAS0302 OS=Staphylococcus aureus (strain MSSA476) GN=SAS0302 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 47/136 (34.56%), Postives = 73/136 (53.68%), Query Frame = 3
Query:  321 VNSANEKMLG----GGGC-DGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYG---VTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704
            VN+AN + LG       C D  IH  AG ++   C  +     G     G+A+IT G+ LPA ++IHTVGP      V+   +  L   Y + L LA  +++ ++AF  IS G++ +P +EAA IA+ TV+ +  +
Sbjct:  103 VNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQ-GRNEGVGKAKITRGYNLPAKYIIHTVGPQIRRLPVSKMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKE 237          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y2383_SULTO (UPF0189 protein ST2383 OS=Sulfolobus tokodaii GN=ST2383 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.014e-11
Identity = 50/130 (38.46%), Postives = 66/130 (50.77%), Query Frame = 3
Query:  321 VNSANEKMLGGGGCDGAIHRAAGPELL-EACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYGVTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFANDF 707
            VN+AN  +  GGG   AI    G  +  E+   V + G     PTG   +T   KL A +VIH VGP YG  I  E  L  A +N+L  A+   +  IA PAIS G+Y YP+E  A   +  +KE   +F
Sbjct:   19 VNAANSYLEHGGGVARAIVEKGGYIIQKESREYVRKYG---PVPTGGVAVTSAGKLKAKYVIHAVGPRYG--IEGEEKLEEAIRNALRKAEELKLSSIALPAISTGIYGYPYEICAEKMVKVIKEEYTNF 143          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y325_STAAM (UPF0189 protein SAV0325 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0325 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  321 VNSANEKMLG----GGGC-DGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYG---VTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704
            VN+AN + LG       C D  IH  AG ++   C  +     G     G+A+ T G+ LPA ++IHTVGP      V+   +  L   Y + L LA  +++ ++AF  IS G++ +P +EAA IA+ TV+ +  +
Sbjct:  103 VNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQ-GRNEGVGKAKKTRGYNLPAKYIIHTVGPQIRRLPVSKMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKE 237          
BLAST of FC931064 vs. ExPASy Swiss-Prot
Match: Y314_STAAN (UPF0189 protein SA0314 OS=Staphylococcus aureus (strain N315) GN=SA0314 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  321 VNSANEKMLG----GGGC-DGAIHRAAGPELLEACYRVPEVGFGIRCPTGEARITPGFKLPASHVIHTVGPIYG---VTINPEASLRSAYKNSLSLAKANNIQYIAFPAISCGLYCYPHEEAATIAISTVKEFAND 704
            VN+AN + LG       C D  IH  AG ++   C  +     G     G+A+ T G+ LPA ++IHTVGP      V+   +  L   Y + L LA  +++ ++AF  IS G++ +P +EAA IA+ TV+ +  +
Sbjct:  103 VNAANSRFLGCMQANHDCIDNIIHTKAGVQVRLDCAEIIRQQ-GRNEGVGKAKKTRGYNLPAKYIIHTVGPQIRRLPVSKMNQDLLAKCYLSCLKLADQHSLNHVAFCCISTGVFAFPQDEAAEIAVRTVESYLKE 237          
The following BLAST results are available for this feature:
BLAST of FC931064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
Y1216_STRP11.849e-1340.46UPF0189 protein SPy_1216/M5005_Spy0930 OS=Streptoc... [more]
Y1168_STRP81.849e-1340.46UPF0189 protein spyM18_1168 OS=Streptococcus pyoge... [more]
PAR14_MOUSE4.118e-1337.30Poly [ADP-ribose] polymerase 14 OS=Mus musculus GN... [more]
Y1252_SULAC1.565e-1238.76UPF0189 protein Saci_1252 OS=Sulfolobus acidocalda... [more]
Y322_STAAR2.044e-1235.29UPF0189 protein SAR0322 OS=Staphylococcus aureus (... [more]
Y302_STAAW2.044e-1234.56UPF0189 protein MW0302 OS=Staphylococcus aureus (s... [more]
Y302_STAAS2.044e-1234.56UPF0189 protein SAS0302 OS=Staphylococcus aureus (... [more]
Y2383_SULTO1.014e-1138.46UPF0189 protein ST2383 OS=Sulfolobus tokodaii GN=S... [more]
Y325_STAAM1.325e-1133.82UPF0189 protein SAV0325 OS=Staphylococcus aureus (... [more]
Y314_STAAN1.325e-1133.82UPF0189 protein SA0314 OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionC34101A07EF PostHarvP1 Citrus clementina cDNA clone C34101A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931064 ID=FC931064; Name=FC931064; organism=Citrus clementina; type=EST; length=708bp
GGAGCTTGATTGATCAGGGATTATGAATGCTTCCTCTACCAAAGGATCTT
TTTGAGAGTGCTTTTGGTAGTGCCTAAAGCGCTTTTAAGTAGCCAAGAGC
CATTGTGTCTATTGGTGTTTTCCTAGAGATCTTTTGACATTAGAAAGTGC
TTTTTGAACAAATAATTTATTGGTGTTTTTGCAAGAAGAACAATTGACTT
GAAAGTACTTTTTTGCAAAATCACTGGCAGCACACCTTACAGTTAATGAT
CGCTTGATTGAATAGGAAGGTTGGTGTTGAAAAGGGAAATTGCAATTGAT
TGAATGGTTGTTTGCTATAGGTTAATTCAGCCAATGAGAAAATGCTTGGA
GGTGGCGGTTGCGATGGAGCTATACATAGGGCTGCAGGACCAGAACTTCT
AGAAGCTTGTTATAGAGTTCCAGAAGTTGGATTTGGAATCCGTTGTCCCA
CAGGAGAAGCAAGAATTACACCAGGTTTTAAATTGCCTGCATCTCATGTG
ATTCACACTGTTGGCCCAATCTATGGTGTTACTATTAACCCTGAAGCTTC
CCTGAGAAGTGCGTACAAGAACAGCTTGAGCTTGGCCAAAGCGAATAACA
TTCAGTACATTGCTTTTCCTGCCATATCGTGTGGCTTATATTGTTATCCT
CATGAGGAAGCCGCCACAATAGCTATATCTACAGTCAAAGAATTTGCTAA
TGACTTTA
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