FC931067

Overview
NameFC931067
Unique NameFC931067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: SYNJ1_MOUSE (Synaptojanin-1 OS=Mus musculus GN=Synj1 PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.551e-23
Identity = 58/159 (36.48%), Postives = 85/159 (53.46%), Query Frame = 1
Query:   28 SHDQIFWFGDLNYRLNMMDTEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILW----------------LGKGIKQ-------------LAYTRAEILLSDHRPVSSTFLVQVEVLD 417
            SHD +FW GD NYR+++ + EV+EL+ Q+ WD LI  DQL  + ++G +F G+ EG + F PTYKY++ S+ Y        EK R+PAW DR+LW                L    +              L Y RAE+  SDHRPV +  L+ +++ +
Sbjct:  721 SHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPTYKYDLFSEDY-----DTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVA--LIDIDIFE 872          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: INP51_YEAST (Inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Saccharomyces cerevisiae GN=INP51 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.324e-22
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 1
Query:   31 HDQIFWFGDLNYRLNMMDTEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIKQLAYTRAE-ILLSDHRPVSSTFLVQVEVLDHRK 426
            HD I W GD NYR+ M + +VR  +  K +  L   DQL++++ +G  F  + E  I+FPPTYK++  +  Y        EK R PAW DRIL  G+ ++QL Y   E IL SDHRPV + F  +V V+D +K
Sbjct:  704 HDAIIWMGDFNYRILMSNEDVRRKIVSKEYASLFEKDQLNQQMIAGESFPYFHEMAIDFPPTYKFDPGTKNY-----DTSEKMRIPAWTDRILSRGEVLEQLEYKCCEDILFSDHRPVYAIFRARVTVVDEQK 831          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: SYNJ2_MOUSE (Synaptojanin-2 OS=Mus musculus GN=Synj2 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22
Identity = 62/176 (35.23%), Postives = 88/176 (50.00%), Query Frame = 1
Query:   28 SHDQIFWFGDLNYRLNMMDTEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGK-------------------GIKQLAYT----------RAEILLSDHRPVSSTFLVQVEVLDHRKLKRALNVSSAVVHP 468
            SHD +FW GD NYR+++   EV   V ++ W KL+  DQL  +  SG +F+ + EG +NF PTYKY++ S  Y        +K R+PAW DR+LW  K                   G  Q+ +T          RAE+  SDHRPV +   V+V+ +D    +R     S+V  P
Sbjct:  717 SHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDFHEGAVNFGPTYKYDVGSAAY-----DTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDGDPQIRHTWSPGTLKYYGRAELQASDHRPVLAIVEVEVQEVDVGARERVFQEVSSVQGP 887          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: SYNJ2_RAT (Synaptojanin-2 OS=Rattus norvegicus GN=Synj2 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.912e-21
Identity = 62/176 (35.23%), Postives = 87/176 (49.43%), Query Frame = 1
Query:   28 SHDQIFWFGDLNYRLNMMDTEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGK-------------------GIKQLAYT----------RAEILLSDHRPVSSTFLVQVEVLDHRKLKRALNVSSAVVHP 468
            SHD +FW GD NYR+++   EV   V ++ W KL+  DQL  +  SG +F+ + EG INF PTYKY++ S  Y        +K R+PAW DR+LW  K                   G   + +T          RAE+  SDHRPV +   V+V+ +D    +R     S+V  P
Sbjct:  734 SHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLMEFDQLQLQKSSGKIFKDFHEGTINFGPTYKYDVGSAAY-----DTSDKCRTPAWTDRVLWWRKKHPYDKTAGELNLLDSDLDGDANIRHTWSPGTLKYYGRAELQASDHRPVLAIVEVEVQEVDVGARERVFQEVSSVQGP 904          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: SYJ1_SCHPO (Inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Schizosaccharomyces pombe GN=syj1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.259e-21
Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = 1
Query:   28 SHDQIFWFGDLNYRLNMMDTEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIKQLAYTRAEILLSDHRPVSSTFLVQVEVLDHRKLK 432
            +HD + WFGD NYR+++   EV   +AQ +   L   DQL+K++ +G VF  + E  I FPPTYK++I +D Y        +K R PAW DRIL+ G+ +   +Y    +  SDHRP+ +T+   +  +D  K K
Sbjct:  731 NHDYVVWFGDFNYRISLTYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFPFFSELPITFPPTYKFDIGTDIY-----DTSDKHRVPAWTDRILYRGELVPH-SYQSVPLYYSDHRPIYATYEANIVKVDREKKK 859          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: SYNJ2_HUMAN (Synaptojanin-2 OS=Homo sapiens GN=SYNJ2 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21
Identity = 62/177 (35.03%), Postives = 85/177 (48.02%), Query Frame = 1
Query:   28 SHDQIFWFGDLNYRLNMMDTEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGK------------------------------GIKQLAYTRAEILLSDHRPVSSTFLVQVEVLDHRKLKRALNVSSAVVHP 468
            SHD +FW GD NYR+++   EV   V ++ W KL+  DQL  +  SG +F+ + EG INF PTYKY++ S  Y        +K R+PAW DR+LW  K                              G  Q  Y RAE+  SDHRPV +   V+V+ +D    +R     S+   P
Sbjct:  717 SHDYVFWCGDFNYRIDLTYEEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHEGAINFGPTYKYDVGSAAY-----DTSDKCRTPAWTDRVLWWRKKHPFDKTAGELNLLDSDLDVDTKVRHTWSPGALQY-YGRAELQASDHRPVLAIVEVEVQEVDVGARERVFQEVSSFQGP 887          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: IP5P4_ARATH (Type II inositol-1,4,5-trisphosphate 5-phosphatase FRA3 OS=Arabidopsis thaliana GN=FRA3 PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.160e-18
Identity = 57/152 (37.50%), Postives = 87/152 (57.24%), Query Frame = 1
Query:   10 QPQTSPSHDQIFWFGDLNYRLNMMD-TEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILW------LGKG-------IKQLAYTRA--EILLSDHRPVSSTFLVQVEVLD 417
            +P+ S + D + + GD NYRL+ +   E R+ ++Q+ +D L   DQL  E+ +G+VF+G +E +I FPPTYK+E +     G +   GEKKR PAWCDRIL+      LG         +  ++   A  E+  SDH+PV   F V++  +D
Sbjct:  742 RPELSEA-DMVIFLGDFNYRLDDITYDETRDFISQRCFDWLREKDQLHTEMEAGNVFQGMREAIIRFPPTYKFERHQAGLAGYD--SGEKKRIPAWCDRILYRDNKKHLGAECSLDCPVVSSISQYDACMEVTDSDHKPVRCVFSVKIARVD 890          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: PI5PA_HUMAN (Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A OS=Homo sapiens GN=INPP5J PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 55/165 (33.33%), Postives = 87/165 (52.73%), Query Frame = 1
Query:   31 HDQIFWFGDLNYRLNMMDTE-VRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKG----------------IKQLAY-TRAEILLSDHRPVSSTFLVQVEVLDHRKLKRALNVSSAVVHPD 471
            HD +FWFGDLN+R+   D   V+  +   +  +L   DQL+   ++  + +G++EG +NF PT+K+++ +++Y         KKR PAW DRILW  K                 + Q +Y +  E  +SDH+PV++ FL+Q    D   L R L V+   V P+
Sbjct:  595 HDLVFWFGDLNFRIESYDLHFVKFAIDSDQLHQLWEKDQLNMAKNTWPILKGFQEGPLNFAPTFKFDVGTNKY-----DTSAKKRKPAWTDRILWKVKAPGGGPSPSGRKSHRLQVTQHSYRSHMEYTVSDHKPVAAQFLLQFAFRDDMPLVR-LEVADEWVRPE 753          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: IP5PC_ARATH (Type I inositol-1,4,5-trisphosphate 5-phosphatase 12 OS=Arabidopsis thaliana GN=5PTASE12 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 55/150 (36.67%), Postives = 81/150 (54.00%), Query Frame = 1
Query:   34 DQIFWFGDLNYRL-NMMDTEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIK---------------QLAYTRAEILLSDHRPVSSTFLVQVEVLDHRKLKR 435
            D + +FGD NYRL  +   E R+ V+Q+ +D L   DQL  E+ +G VF+G +E +I FPPTYK+E +     G +   GEKKR PAWCDR+++                      L     ++  SDH+PV   F V++E +D R ++R
Sbjct:  788 DMVVFFGDFNYRLFGISYDEARDFVSQRSFDWLREKDQLRAEMKAGRVFQGMREAIITFPPTYKFERHRPGLGGYD--SGEKKRIPAWCDRVIFRDTRTSPESECSLDCPVVASIMLYDACMDVTESDHKPVRCKFHVKIEHVD-RSVRR 934          
BLAST of FC931067 vs. ExPASy Swiss-Prot
Match: SHP2A_DANRE (Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2A OS=Danio rerio GN=inppl1a PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18
Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = 1
Query:   40 IFWFGDLNYRLNMMDTEVRELVAQKRWDKLINSDQLSKELHSGHVFEGWKEGVINFPPTYKYEINS-DRYVGENPK-EGEKKRSPAWCDRILWLGKGIKQLAYT----RAEILLSDHRPVSSTFLVQV 405
            +FWFGDLNYRL+M   E+   + +K +D L+  DQL+ E     +F  + E  I++PPTY+YE  S D YV +  K  G +   P+WCDRILW       +         +I+ SDH PV  TF V V
Sbjct:  586 LFWFGDLNYRLDMDIQEILNYINRKEFDPLLKVDQLNLEREKNKIFLRFAEEEISYPPTYRYERGSRDTYVWQKQKATGMRTNVPSWCDRILWKSYPETHIVCNSYGCTDDIVTSDHSPVFGTFEVGV 713          
The following BLAST results are available for this feature:
BLAST of FC931067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
SYNJ1_MOUSE4.551e-2336.48Synaptojanin-1 OS=Mus musculus GN=Synj1 PE=1 SV=3[more]
INP51_YEAST1.324e-2242.11Inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Sa... [more]
SYNJ2_MOUSE6.571e-2235.23Synaptojanin-2 OS=Mus musculus GN=Synj2 PE=2 SV=2[more]
SYNJ2_RAT1.912e-2135.23Synaptojanin-2 OS=Rattus norvegicus GN=Synj2 PE=1 ... [more]
SYJ1_SCHPO4.259e-2138.52Inositol-1,4,5-trisphosphate 5-phosphatase 1 OS=Sc... [more]
SYNJ2_HUMAN5.563e-2135.03Synaptojanin-2 OS=Homo sapiens GN=SYNJ2 PE=1 SV=3[more]
IP5P4_ARATH1.160e-1837.50Type II inositol-1,4,5-trisphosphate 5-phosphatase... [more]
PI5PA_HUMAN1.978e-1833.33Phosphatidylinositol 4,5-bisphosphate 5-phosphatas... [more]
IP5PC_ARATH1.978e-1836.67Type I inositol-1,4,5-trisphosphate 5-phosphatase ... [more]
SHP2A_DANRE2.584e-1840.63Phosphatidylinositol-3,4,5-trisphosphate 5-phospha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101A10EF PostHarvP1 Citrus clementina cDNA clone C34101A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931067 ID=FC931067; Name=FC931067; organism=Citrus clementina; type=EST; length=723bp
GGAACAGATCAACCACAGACATCTCCATCTCATGATCAGATATTCTGGTT
TGGGGATTTGAATTATCGTCTCAATATGATGGACACAGAAGTTCGGGAGC
TTGTTGCTCAGAAGCGGTGGGATAAGCTTATCAACAGTGATCAGCTAAGC
AAAGAACTCCACAGTGGGCATGTGTTTGAGGGATGGAAAGAGGGAGTGAT
AAACTTTCCACCAACTTACAAATACGAAATAAATTCTGATAGATATGTTG
GTGAGAACCCAAAAGAAGGGGAGAAGAAAAGATCTCCAGCATGGTGTGAT
CGTATACTTTGGCTAGGAAAAGGCATAAAACAACTTGCTTACACGCGGGC
AGAGATACTACTCTCTGATCATCGGCCTGTTAGTTCAACGTTCTTGGTTC
AAGTTGAGGTCTTAGACCATCGAAAGTTGAAGAGAGCACTCAATGTCAGC
TCTGCAGTAGTACATCCTGATATTTTCTTAGATGAAGATGGGGAACTAGA
GCTTCAGCAATTACCAGGTAGAATACCAGGGGACCGCAAGTTGTTTGGCT
AACATTAGAAGTTGACATCAAATCGATATACGGGTATCGACATCCACCTT
CAGGTTGAAGCACGAACAAAATCAAATCCTTGTGACAATAGCAAGGAAAA
GAAGTGTTCTGTATAGCCTTGAGTCACATAATACTTGATACATAGTCAAT
ATATAGATATAGCAATGTGCCAA
back to top