FC931069

Overview
NameFC931069
Unique NameFC931069
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10254 contig Ccv1_Contig10254:1..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45
Identity = 92/171 (53.80%), Postives = 114/171 (66.67%), Query Frame = 1
Query:  148 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEEIYEKTGKLPDPASTDNAEFQIVL 660
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNI+STQDH               KGE+L++YW  T +  DW  GG P++I+DDGGDAT+ +H G++AE     T  L  P S +   F  +L
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLEDYWDYTARMFDWHGGGTPNMILDDGGDATMYVHLGLRAEN--GDTAFLDKPGSDEEVIFFALL 170          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_RHIME (Adenosylhomocysteinase OS=Rhizobium meliloti GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45
Identity = 89/143 (62.24%), Postives = 103/143 (72.03%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +++ V D+  ADFGR EI +AE EMPGLMACR EFG S+P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGETL+EYW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE
Sbjct:    5 QDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAE 147          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            ++ V D+  AD+GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+LQEYW  T +  +W  GG P++I+DDGGDATLL+H G KAE+
Sbjct:   10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAATGTPVFAFKGESLQEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAEK 152          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_HYPNA (Adenosylhomocysteinase OS=Hyphomonas neptunium (strain ATCC 15444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45
Identity = 88/146 (60.27%), Postives = 108/146 (73.97%), Query Frame = 1
Query:  151 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            A+ +++ VKD+S A++GR EI +AE EMPGLMA R EFGPSQP KGA+I GSLHMTIQTAVLI+TL ALGA+VRW SCNI+STQDH              +KGETL+EYW  T++   W  G GP+LI+DDGGDAT+ +  G KAE
Sbjct:    5 AAPQDYFVKDISLAEYGRKEIAIAETEMPGLMAAREEFGPSQPLKGARICGSLHMTIQTAVLIQTLEALGAQVRWVSCNIYSTQDHAAAAIADAGTAVFAYKGETLEEYWDYTDRMFQWPDGEGPNLILDDGGDATMYLILGEKAE 150          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.121e-45
Identity = 92/143 (64.34%), Postives = 103/143 (72.03%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            ++ VKD+S ADFGR EI +AE EMPGLMA RAE+GP Q  KGA+I GSLHMTIQTAVLIETLTALGAEVRW SCNIFSTQDH              +KGE L EYW    K  +W  GG P+LI+DDGGDATLL   G KAE+
Sbjct:    3 DYIVKDISLADFGRKEIAIAETEMPGLMATRAEYGPQQILKGARIAGSLHMTIQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAFKGENLVEYWEYAHKIFEWHDGGYPNLILDDGGDATLLCVLGPKAEK 145          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_RALSO (Adenosylhomocysteinase OS=Ralstonia solanacearum GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.809e-44
Identity = 87/143 (60.84%), Postives = 104/143 (72.73%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAEE 591
            ++ V D+  AD+GR EI +AE EMPGLMA R EF  SQP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNIFSTQDH              +KGE+L+EYW  T +  +W  GG P++I+DDGGDATLL+H G KAE+
Sbjct:   10 DYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAEQ 152          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_METNO (Adenosylhomocysteinase OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.086e-44
Identity = 86/145 (59.31%), Postives = 104/145 (71.72%), Query Frame = 1
Query:  154 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            S +++ V+D+  ADFGR EI +AE EMPGLMA R E+  SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH               KGETL EYW  T K  +W  GG P++I+DDGGDAT+ +H G++AE
Sbjct:    3 SAQDYIVRDIGLADFGRKEIAIAETEMPGLMAVRREYAASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTEYWDYTAKLFEWHDGGMPNMILDDGGDATMFVHAGLRAE 147          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_AGRRK (Adenosylhomocysteinase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.264e-44
Identity = 87/142 (61.27%), Postives = 103/142 (72.54%), Query Frame = 1
Query:  163 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            ++ V D+  ADFGR EI +AE EMPGLMACRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE
Sbjct:    6 DYIVADIGLADFGRKEITIAETEMPGLMACRAEFGETKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVYAIKGESLEDYWIYTDKIFQWADGGFSNMILDDGGDATMYILLGARAE 147          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_RHIEC (Adenosylhomocysteinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.875e-44
Identity = 86/143 (60.14%), Postives = 104/143 (72.73%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +++ V D+  ADFGR EI +AE EMPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRAEFGEAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE 147          
BLAST of FC931069 vs. ExPASy Swiss-Prot
Match: SAHH_RHIE6 (Adenosylhomocysteinase OS=Rhizobium etli (strain CIAT 652) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.875e-44
Identity = 86/143 (60.14%), Postives = 104/143 (72.73%), Query Frame = 1
Query:  160 REFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXXWKGETLQEYWWCTEKALDWGPGGGPDLIVDDGGDATLLIHEGVKAE 588
            +++ V D+  ADFGR EI +AE EMPGLM+CRAEFG ++P KGA+ITGSLHMTIQTAVLIETL ALGAEVRW SCNIFSTQDH               KGE+L++YW  T+K   W  GG  ++I+DDGGDAT+ I  G +AE
Sbjct:    5 KDYVVADIGLADFGRKEITIAETEMPGLMSCRAEFGDAKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAIAAAGVPVFAIKGESLEDYWVYTDKIFQWADGGLSNMILDDGGDATMYILLGARAE 147          
The following BLAST results are available for this feature:
BLAST of FC931069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 235
Match NameE-valueIdentityDescription
SAHH_RHOP28.121e-4553.80Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RHIME8.121e-4562.24Adenosylhomocysteinase OS=Rhizobium meliloti GN=ah... [more]
SAHH_RALPJ8.121e-4561.54Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_HYPNA8.121e-4560.27Adenosylhomocysteinase OS=Hyphomonas neptunium (st... [more]
SAHH_CAUCR8.121e-4564.34Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_RALSO1.809e-4460.84Adenosylhomocysteinase OS=Ralstonia solanacearum G... [more]
SAHH_METNO3.086e-4459.31Adenosylhomocysteinase OS=Methylobacterium nodulan... [more]
SAHH_AGRRK5.264e-4461.27Adenosylhomocysteinase OS=Agrobacterium radiobacte... [more]
SAHH_RHIEC6.875e-4460.14Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]
SAHH_RHIE66.875e-4460.14Adenosylhomocysteinase OS=Rhizobium etli (strain C... [more]

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Properties
Property NameValue
Genbank descriptionC34101A12EF PostHarvP1 Citrus clementina cDNA clone C34101A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931069 ID=FC931069|Name=FC931069|organism=Citrus clementina|type=EST|length=668bp
GGCTCACACCCACTCTATCTCTCTCGCTTGTACAATCATTCACTTTGTTT
GGTTGGTTTCCAAAGAGAGAGTAGAGTGCCCTCTCTTCCTTCTTCCTTTT
AGATCTATCAATTCTATTAATAAGCCATGGCTTTGTCCGTCCAGAAATCC
GCTAGCGGTCGTGAATTCAAGGTGAAGGATCTGTCCCAGGCTGACTTCGG
CCGCCTCGAAATCGAGTTGGCCGAAGTCGAAATGCCGGGGCTCATGGCTT
GCCGCGCCGAGTTCGGCCCTTCACAGCCCTTCAAAGGAGCCAAGATCACC
GGTTCACTCCACATGACCATCCAGACCGCCGTCCTCATCGAGACCCTCAC
CGCTCTCGGCGCCGAAGTCCGCTGGTGCTCCTGCAACATCTTCTCAACCC
AAGACCACGCGGCCGCCGCCATCGCACGTGACTCCGCCTCCGTCTTTGCC
TGGAAGGGTGAGACCCTCCAGGAGTACTGGTGGTGCACGGAGAAAGCCCT
GGACTGGGGTCCCGGCGGCGGCCCAGATCTCATCGTCGATGACGGTGGTG
ACGCCACGTTGTTGATCCACGAGGGAGTCAAAGCTGAGGAGATCTACGAG
AAGACCGGGAAGTTGCCCGACCCGGCCTCCACCGACAACGCCGAGTTTCA
GATTGTTTTGACTATCAT
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