FC931072

Overview
NameFC931072
Unique NameFC931072
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length680
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15263 contig Ccv1_Contig15263:1..680. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 5.634e-49
Identity = 107/222 (48.20%), Postives = 146/222 (65.77%), Query Frame = 2
Query:   35 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            M S  E Q+     +  +EE+   AMQLA   VLPM  +AAI+L + EI+AKAG    LS  +IA+QL  +N  AP+MLDRMLRLL S+ +L  S+ +      ERLYGL PV K+   N++GVS+     +  DKV +ESW  L+DAV+EGGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M++ILE Y+GF+ +  +VDVGGG G  L+MI S
Sbjct:    1 MGSTGETQMTP--TQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVS 220          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.255e-48
Identity = 105/222 (47.30%), Postives = 147/222 (66.22%), Query Frame = 2
Query:   35 MRSLSEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            M S  E Q+     +  +EE+   AMQLA   VLPM  +AAI+L + EI+AKAG    LS  ++A+QL  +N +AP+MLDRMLRLL S+ +L  S+ +      ERLYGL PV K+   N+DGVS+     +  DKV +ESW  L+DAV++GGIPFN+ +GM  F+Y   +P FN+ ++K M +HSTI M++ILE Y+GF+ +  +VDVGGG G  ++MI S
Sbjct:    1 MGSTGETQMTP--TQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVS 220          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.141e-48
Identity = 103/208 (49.52%), Postives = 136/208 (65.38%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKA------GKLSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV-----SSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            +EE+   AMQLA   VLPM  +AAI+L V EI+AK+        +S  EIAAQL   N  AP+MLDR+LRLL S+ V+ CS+        ERLYGL PV K+   N+DGVSL     +  DKV MESW  L+DA+++GGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M++I E Y GF+ +  +VDVGGG G  LSMI +
Sbjct:   18 DEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVA 225          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.770e-48
Identity = 96/205 (46.83%), Postives = 139/205 (67.80%), Query Frame = 2
Query:   86 EEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            E+E++  AMQLA   VLPM  +A ++L + EI+AK+G    +S  E+AAQL  +N +AP+MLDRM RLL ++ VL C++ +      ERLY L PV K+   N DGVS+   + +  DKV MESW  L DAV++GG+PFN+ +GM  FEY   +P FN+ ++  M +H+T++M++ILE Y GF+ +  +VDVGGG G T++MI S
Sbjct:   12 EDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVS 216          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 8.136e-48
Identity = 105/219 (47.95%), Postives = 144/219 (65.75%), Query Frame = 2
Query:   47 SEIQLPKQNNKYEEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKA----GKLSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVL-----ECSVSSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            +EIQ+   ++   +EE+   AMQLA   VLPMA +AAI+L V EI+AK+    G +S  EIAAQL   N +AP+MLDR+LRLL S+ V+     E      ERLYGL PV K+   N+DGVSL  F+    DKV +E W  L+DA++EGGIPFN+ +GM+ F+Y   +  FN+ ++K M ++STI M++ILE Y GF+ +  +VDVGGG G   SMI +
Sbjct:    7 AEIQIIPTHSS--DEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVA 223          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.063e-47
Identity = 97/198 (48.99%), Postives = 136/198 (68.69%), Query Frame = 2
Query:  107 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV-----SSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            AMQLA   VLP    AAI+L + EI+A+AG    L+  E+A+QL  QN  AP+MLDR+ RLL S+ VL C++        ERLYGL P+ K+ V N+DGVSL     +  D+VF+ESW  ++DA++EGGIPF++ HGM  F+Y   +P FN+ +++AM +HSTI M++ILE Y GF+ ++ +VDVGGG G  L+MI +
Sbjct:    5 AMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVA 202          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 8.995e-47
Identity = 99/204 (48.53%), Postives = 134/204 (65.69%), Query Frame = 2
Query:   89 EESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAGK---LSAPEIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSV-----SSGERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            +E  + AMQL    VLPM  + AI+L + EI+AKAG    LS  +IA+ L  +N  AP+MLDR+LRLL S+ +L CS+        ERLYGL  V K+   N+DGVS+     +  DKV MESW  L+DA++EGGIPFN+ +GM  FEY   +P FN+ ++K M +HS +AM++ILE Y+GF+ +  LVDVGGG G  +S I S
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVS 219          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.004e-46
Identity = 96/207 (46.38%), Postives = 137/207 (66.18%), Query Frame = 2
Query:   83 EEEESYSHAMQLAMGVVLPMATQAAIQLGVFEIIAKAG---KLSAPEIAAQL-QAQNVKAPMMLDRMLRLLVSHRVLECSVSS-----GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            ++++++  AMQLA   VLPM  + AI+L + E IAKAG    +S+ E+ AQL +  N +AP+M+DR+  LL S+ VL C++        ER YGL PV K+ + N  GVSL   + +  DKV MESW  L+D V++GGIPFN+ +GM  FEY   +  FN+ ++  MFNHST+ M++I+E Y GF  ++ LVDVGGG G +L+MITS
Sbjct:    5 QDDQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITS 211          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.464e-46
Identity = 96/193 (49.74%), Postives = 129/193 (66.84%), Query Frame = 2
Query:  107 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGKLSAP-EIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSS--GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            AMQLA   VLPM  ++AI+L + EII       +P EIA+ L   N  AP M+DR+LRLL  + V+ CSV S   +R+YGL PV KY   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M+++ + Y+GFQ +  LVDVGGG G TL+MI S
Sbjct:    4 AMQLACASVLPMVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILS 196          
BLAST of FC931072 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.464e-46
Identity = 96/193 (49.74%), Postives = 129/193 (66.84%), Query Frame = 2
Query:  107 AMQLAMGVVLPMATQAAIQLGVFEIIAKAGKLSAP-EIAAQLQAQNVKAPMMLDRMLRLLVSHRVLECSVSS--GERLYGLTPVSKYFVSNKDGVSLGHFMALPLDKVFMESWLGLRDAVMEGGIPFNRVHGMHIFEYASGNPGFNETYHKAMFNHSTIAMERILEHYEGFQNVERLVDVGGGFGVTLSMITS 676
            AMQLA   VLPM  ++AI+L + EII       +P EIA+ L   N  AP M+DR+LRLL  + V+ CSV S   +R+YGL PV KY   N+DGVS+     +  DKV MESW  L+DAV++GGIPFN+ +GM  FEY   +P FN+ +++ M +HSTI M+++ + Y+GFQ +  LVDVGGG G TL+MI S
Sbjct:    4 AMQLASASVLPMVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILS 196          
The following BLAST results are available for this feature:
BLAST of FC931072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT1_PRUDU5.634e-4948.20Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_ROSCH1.255e-4847.30Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CLABR2.141e-4849.52Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_CAPCH4.770e-4846.83Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
IEMT_CLABR8.136e-4847.95(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_EUCGL1.063e-4748.99Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT3_POPKI8.995e-4748.53Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_ZINEL2.004e-4646.38Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT2_CHRAE4.464e-4649.74Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE4.464e-4649.74Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionC34101B03EF PostHarvP1 Citrus clementina cDNA clone C34101B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931072 ID=FC931072; Name=FC931072; organism=Citrus clementina; type=EST; length=680bp
AAAAAAGGAGGGAAAAAAAAAACTATAAGAAACAATGCGTTCGTTGTCGG
AAATACAGTTACCCAAACAGAATAATAAATATGAAGAAGAAGAGAGCTAT
TCACATGCCATGCAGCTAGCAATGGGCGTAGTGCTGCCCATGGCAACCCA
GGCAGCTATTCAGCTTGGCGTTTTTGAAATCATAGCCAAAGCTGGCAAAC
TCTCGGCTCCAGAGATTGCAGCACAGTTACAAGCGCAAAACGTAAAAGCA
CCAATGATGCTAGACAGAATGCTCAGGCTTCTGGTCAGCCACCGTGTGCT
TGAGTGCTCTGTTTCTAGTGGCGAGAGGCTATATGGTCTCACCCCCGTGT
CCAAATATTTTGTTAGTAATAAAGATGGTGTTTCGTTGGGTCACTTTATG
GCCTTGCCTCTCGACAAGGTCTTCATGGAGAGTTGGTTGGGATTGAGAGA
TGCAGTTATGGAGGGAGGAATACCATTCAATAGGGTGCATGGAATGCACA
TCTTTGAGTACGCTTCCGGAAACCCCGGGTTTAATGAAACTTATCACAAG
GCAATGTTCAACCACTCAACCATAGCCATGGAGAGAATCCTGGAACATTA
CGAGGGCTTTCAGAACGTTGAGCGACTCGTCGATGTTGGAGGAGGCTTTG
GTGTCACCCTCAGTATGATTACTTCCAATA
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