FC931076

Overview
NameFC931076
Unique NameFC931076
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931076_ssr18 microsatellite FC931076_ssr18:18..33. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14439 contig Ccv1_Contig14439:7..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP7_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 7 OS=Oryza sativa subsp. japonica GN=SAP7 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.113e-29
Identity = 62/163 (38.04%), Postives = 92/163 (56.44%), Query Frame = 3
Query:  216 DETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            DET C +   G  +C+  CGFFGS AT NMCS+CY++     D  + AA++   +          E V  A    + + +   +     S +S  +E   AK    P+RC++C+K+VGLTGFKCRCG  +C  HR++D H C FDY++A ++ I K NP++ A
Sbjct:   11 DETACGSGA-GAAMCVTGCGFFGSEATNNMCSRCYREHSADNDAVEEAAAANSDL----------ELVGVAETTTKKARMSAVVPVAVASSSSAAAEQPAAKAATAPNRCAACRKKVGLTGFKCRCGGNFCGGHRHADAHGCGFDYKSAGKEQIAKQNPLVVA 162          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP3_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Arabidopsis thaliana GN=SAP3 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.935e-29
Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 3
Query:  249 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAK--------------PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            P LC NNCGFFGS AT N+CSKC++D+  ++  +  A  ++            ++S+AA      +S      +S  P   ++  E VEAK              P + P RC +C++RVG+TGF+CRCG ++C +HRY+++H C FD++   +D I K+NP++KA
Sbjct:   10 PRLCANNCGFFGSTATQNLCSKCFRDLQHQEQNSSTAKHAL------------TQSLAAVGAAASSS------VSPPPPPPADSKEIVEAKSEKRAAAEPEEADGPPQDPKRCLTCRRRVGITGFRCRCGFVFCGTHRYAEQHECSFDFKRMGKDKIAKANPIVKA 157          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP5_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Oryza sativa subsp. japonica GN=SAP5 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29
Identity = 65/149 (43.62%), Postives = 88/149 (59.06%), Query Frame = 3
Query:  255 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIK 701
            LC NNCGFFGS AT+++CSKCY+D   ++  A +  ++  S    T  S+ S S   A +                S A+E    V A  K   SRC+SC+KRVGLTGF CRCG  +C +HRY ++H C FD++ A RDAI ++NP+IK
Sbjct:   14 LCANNCGFFGSPATLDLCSKCYRDRQGRESTAPVVVAAAASACPATHPSSPSSSSCPAFLP--------------SSTAAEAGVVVAAVAKA--SRCASCRKRVGLTGFACRCGGTFCGAHRYPERHACGFDFKAAGRDAIARANPLIK 146          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.057e-29
Identity = 63/150 (42.00%), Postives = 87/150 (58.00%), Query Frame = 3
Query:  255 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            LC N+CGF G+ AT N+C  C+         +  AAS        T+S      V      VQ+S+     + V+   A  +  S +A      +RC SC++RVGLTGF+CRCG LYC +HRYSD+H+C FDY++AARDAI + NPV++A
Sbjct:   21 LCANSCGFPGNPATNNLCQNCFLAASASSSSSSAAASP------STTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRA 164          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.491e-27
Identity = 71/191 (37.17%), Postives = 101/191 (52.88%), Query Frame = 3
Query:  249 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP----SCAS-------------------------------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVI 698
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A +T+D  +SS++P  +S Q     S AS                               E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSTLDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDLQASVSDTAQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVV 200          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27
Identity = 69/191 (36.13%), Postives = 96/191 (50.26%), Query Frame = 3
Query:  249 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP-----------------------------------SCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVI 698
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S     V   S S      +GS   A + +D  ASSV+P  +S Q                                      + E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAPSVTSLSESLPVQCTDGSVPEAQSALDSTASSVQPSPVSNQSLLSESVASSQVDSTSVDKAIPETEDLQASVSETAQQASEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVV 200          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 3
Query:  201 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            +  D + T  +AP     LC N+CGF G+ AT N+C  C+           LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI + NPV++A
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRA 158          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.477e-27
Identity = 65/176 (36.93%), Postives = 97/176 (55.11%), Query Frame = 3
Query:  201 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQ---PSCASELSESVEAKPK-----EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            +  D + T  +AP     LC N+CGF G+ AT N+C  C+           LAA         T+S++   S+++  +D Q       ++  Q   P    E++ ++   P         +RCS C+KRVGLTGF+CRCG+L+C  HRYSD+H C +DY++AARDAI + NPV++A
Sbjct:    5 DKKDQEPTELRAPEI--TLCANSCGFPGNPATQNLCQNCF-----------LAA---------TASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRA 158          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.107e-26
Identity = 72/200 (36.00%), Postives = 92/200 (46.00%), Query Frame = 3
Query:  246 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQ--------------------DQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSV-----------------------EPKIISVQPSCASELSESVEAK----PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            GP+LC   CGF+G+  T  MCS CYK+ + +Q                    D A +  +  G  +N    + GS S  +  V V A  V                       EP +    PS +   S   E K    PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K NPV+ A
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADAG--LNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVA 207          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 61/176 (34.66%), Postives = 95/176 (53.98%), Query Frame = 3
Query:  198 GENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPK-------IISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            G   +   +  Q+    P LC+  CGFFGS + M++CSKCY+ I  ++ Q  +A +++        S   S   +    +  A  VEPK       ++S +PS +S + E+ E       +RC  C K+VG+ GFKC+CG+ +C  HRY + H+C FD++   R  I K+NPV+KA
Sbjct:    2 GSEQNDSTSFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAV------EKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPS-SSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKA 170          
The following BLAST results are available for this feature:
BLAST of FC931076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
SAP7_ORYSJ3.113e-2938.04Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP3_ARATH6.935e-2936.75Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ORYSJ9.057e-2943.62Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ9.057e-2942.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_PONAB6.491e-2737.17AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_BOVIN8.477e-2736.13AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
SAP1_ORYSJ8.477e-2736.93Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI8.477e-2736.93Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_MOUSE1.107e-2636.00AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
SAP9_ARATH1.446e-2634.66Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC34101B08EF PostHarvP1 Citrus clementina cDNA clone C34101B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931076 ID=FC931076; Name=FC931076; organism=Citrus clementina; type=EST; length=704bp
TTTTTAAAAAAAATCACAGAGAGAGAGAGAGAGACACCCGGAAAGGGAAA
CGAGGACGTCTCTCATCGGTTTTTGCCTGCTCTCTCCCCGATAGGCCGAT
CTGGTCCATTTAATTTTAGGGGCTCATTGGATGCTGGCTTGAGCTCGGGG
ATCGGCTTAAGGGATTCATTGCTGTTTCTTCTGTTGCTCGCAGGGGTGGT
GAAAACATGGACCATGATGAGACTGGATGCCAAGCTCCTCCTGAGGGCCC
TATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTGTGGCTACTATGA
ATATGTGTTCCAAATGCTACAAGGATATAATGCTGAAACAGGATCAAGCT
AAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGAAACGTCAAGCAG
CAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATGTGCAAGCTAGTT
CAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGTGCTTCAGAATTG
AGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAGCCGGTGCAGCAG
TTGCAAGAAGCGTGTTGGTTTAACAGGATTCAAATGTCGCTGTGGTAACT
TATACTGTGTGTCACATCGCTATTCGGACAAACATAACTGCCCCTTTGAC
TACCGCACTGCTGCTAGGGATGCTATAATTAAAAGCAACCCTGTGATCAA
GGCT
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