FC931076

Overview
NameFC931076
Unique NameFC931076
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931076_ssr18 microsatellite FC931076_ssr18:18..33. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig14439 contig Ccv1_Contig14439:7..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP3_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 3 OS=Oryza sativa subsp. japonica GN=SAP3 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 1.446e-26
Identity = 61/158 (38.61%), Postives = 94/158 (59.49%), Query Frame = 3
Query:  231 QAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPS-RCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIK 701
            QA    P+LC + CGF+G+ AT++MCS CY+   L    A +A     S+   ++++  + +V + +  V ++ V     S + +      E      K+ P+ RC+SCKK+VGL GF CRCG  YC +HRY +KH C FD++ A+RDAI ++NP+IK
Sbjct:  196 QASAGQPVLCASGCGFYGNPATLDMCSVCYRQHCLLNG-ATMATGPSSSVAAASAATVATGAVTSDSCSVPSAEVNGAAFSSKNN-----PEPATVVEKKAPANRCASCKKKVGLLGFACRCGATYCGTHRYPEKHACGFDFKGASRDAIARANPLIK 347          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.889e-26
Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 3
Query:  255 LCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            LC NNCG   + AT NMC KC+   ++    A       GSI+  ++ S    S  A  V      + P+ I           ++V+ + ++  +RCS C+K+VGLTGF+CRCG L+C  HRYSD+H+C +DY+TA R+AI + NPV+KA
Sbjct:   25 LCTNNCGVTANPATNNMCQKCFNASLVS---AAAGVVESGSILKRSARSVNLRSSPAKVV------IRPREI-----------DAVKKRDQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKA 154          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 70/191 (36.65%), Postives = 100/191 (52.36%), Query Frame = 3
Query:  249 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQP----SCAS-------------------------------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVI 698
            P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q     S AS                               E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+
Sbjct:   11 PMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPATSVSSLSESLPVQCTDGSVPEAQSALDSTSSSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVV 200          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.467e-26
Identity = 71/198 (35.86%), Postives = 91/198 (45.96%), Query Frame = 3
Query:  246 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQ------------AKLAASSIGSIVNETSSSNGSESVAAAT------VDVQASSV-----------------------EPKIISVQPSCA----SELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            GP+LC   CGF+G+  T  MCS CYK+ + +Q              +    S   S+    +S N  E  A +T      V V A  V                       EP +    PS +    S+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K NPV+ A
Sbjct:   10 GPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADTSLNNCEGAAGSTSEKSRNVPVAALPVTQQMTEMSISREDKITTPKTEVSEPVVTQPSPSVSQPSTSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVA 207          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.652e-25
Identity = 64/170 (37.65%), Postives = 91/170 (53.53%), Query Frame = 3
Query:  201 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEP--KIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            E  +       A  E   LC + CGFFGS  T NMCSKCY+D +        A S + S    +SSS  + S    TV +  ++  P   +   +    +  S S  A  K  P+RC +C+K+VGL GF+CRCG  +C +HR++DKH C FD++ + R+ I K NP+I A
Sbjct:   62 EEEEASTAAAAAADEQLALCSSGCGFFGSKETNNMCSKCYRDHLK-------ATSPLFS----SSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAK--PNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVA 218          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 70/208 (33.65%), Postives = 101/208 (48.56%), Query Frame = 3
Query:  243 EGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ------------------------------------------PSCAS--------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVI 698
            + P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q                                          PS  S        E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+
Sbjct:    9 QAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVV 215          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.075e-25
Identity = 70/208 (33.65%), Postives = 101/208 (48.56%), Query Frame = 3
Query:  243 EGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSS------NGSESVAAATVDVQASSVEPKIISVQ------------------------------------------PSCAS--------ELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVI 698
            + P+LC   CGF+G+  T  MCS CYK+ + +Q+ +    S   + V+  S S      +GS   A + +D  +SS++P  +S Q                                          PS  S        E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+
Sbjct:    9 QAPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPAASVSSLSESLPVQCADGSVPDAQSALDSTSSSMQPGPVSNQSLLSESVAPSQVDSTSVDKAVSETEDLQGPRAEGLVPLECDPPSSVSDTTQQPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVV 215          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP2_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Oryza sativa subsp. japonica GN=SAP2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.768e-24
Identity = 63/162 (38.89%), Postives = 87/162 (53.70%), Query Frame = 3
Query:  219 ETGCQAPPEGPIL-CINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIK 701
            E G +   E P L C N CGFFGS  T  +CSKCY+  ++ Q  A  AA+          S+   + V  A          P+ + V             AK K   SRC++C + VGL GF+CRCG ++C +HRYSD+H+C +DYR A RDAI ++NPV++
Sbjct:    2 EQGSERQDERPPLPCANGCGFFGSADTRGLCSKCYRQTVMSQASAPSAAAQ---------SAEHDQVVLPA----------PEGVPVDEGAMPPPPPRHGAKTK---SRCAACGRSVGLMGFECRCGAVFCGAHRYSDRHDCGYDYRGAGRDAIARANPVVR 141          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21
Identity = 54/151 (35.76%), Postives = 76/151 (50.33%), Query Frame = 3
Query:  249 PILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIK 701
            P LCI  CGFF +  T N+CSKCY D +  +    LA  ++        ++  +E V A          E  ++  +  CA                    CKK+VGL GF CRCG+L+  SHRY ++H+CP DY++AA D + K NPV+K
Sbjct:    5 PSLCIRGCGFFSTSQTKNLCSKCYNDFLKDESARYLATFNV--------NTKAAEEVTAQ---------EATVLGSKGGCA--------------------CKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVK 118          
BLAST of FC931076 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 49/153 (32.03%), Postives = 74/153 (48.37%), Query Frame = 3
Query:  246 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKSNPVIKA 704
            G  +C   CGFFGS AT  +CSKCYK    +Q Q +    +     ++TS    ++       D      E   +   P+  ++             +RC +C+K+VGL GF CRCG ++C +H       C FDY+ A R+AI + NP++ A
Sbjct:   14 GAAMCAAGCGFFGSAATDGLCSKCYKQ---QQPQPRHLIGTAAGDSDKTSLKVVADLSTLVIKDNSGVGGEGTTVMAPPATVTKAK-----------NRCKACRKKVGLLGFPCRCGGMFCGAHA------CAFDYKAAGREAIARHNPLVVA 146          
The following BLAST results are available for this feature:
BLAST of FC931076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
SAP3_ORYSJ1.446e-2638.61Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ARATH1.889e-2640.00Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_HUMAN2.467e-2636.65AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN5_HUMAN2.467e-2635.86AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]
SAP12_ORYSJ4.652e-2537.65Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_RAT6.075e-2533.65AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_MOUSE6.075e-2533.65AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]
SAP2_ORYSJ1.768e-2438.89Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH1.401e-2135.76Putative zinc finger A20 and AN1 domain-containing... [more]
SAP10_ORYSJ9.395e-1832.03Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionC34101B08EF PostHarvP1 Citrus clementina cDNA clone C34101B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931076 ID=FC931076; Name=FC931076; organism=Citrus clementina; type=EST; length=704bp
TTTTTAAAAAAAATCACAGAGAGAGAGAGAGAGACACCCGGAAAGGGAAA
CGAGGACGTCTCTCATCGGTTTTTGCCTGCTCTCTCCCCGATAGGCCGAT
CTGGTCCATTTAATTTTAGGGGCTCATTGGATGCTGGCTTGAGCTCGGGG
ATCGGCTTAAGGGATTCATTGCTGTTTCTTCTGTTGCTCGCAGGGGTGGT
GAAAACATGGACCATGATGAGACTGGATGCCAAGCTCCTCCTGAGGGCCC
TATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAGTGTGGCTACTATGA
ATATGTGTTCCAAATGCTACAAGGATATAATGCTGAAACAGGATCAAGCT
AAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAATGAAACGTCAAGCAG
CAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGATGTGCAAGCTAGTT
CAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCATGTGCTTCAGAATTG
AGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCCAGCCGGTGCAGCAG
TTGCAAGAAGCGTGTTGGTTTAACAGGATTCAAATGTCGCTGTGGTAACT
TATACTGTGTGTCACATCGCTATTCGGACAAACATAACTGCCCCTTTGAC
TACCGCACTGCTGCTAGGGATGCTATAATTAAAAGCAACCCTGTGATCAA
GGCT
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