FC931077

Overview
NameFC931077
Unique NameFC931077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15266 contig Ccv1_Contig15266:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18
Identity = 68/242 (28.10%), Postives = 116/242 (47.93%), Query Frame = 2
Query:   14 NNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEIN------------EDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            N +  I F+  FE++D  L        G    L  S   +  D  P L+ F    L++ KE  + R +   + F + ++K  S      ESL    D ++ A+   E N            + ++L  V +I  A IETT   + W +A LV++PE+++K++ E+D  +G     +  D   L  L+A I+E LR+R   PLL+PH    D+ +G + +P ++ +++N W L +    W +P
Sbjct:  176 NIICTICFNISFENKDPILTTIQTFTEGIVDVLGHS---DLVDIFPWLKIFPNKNLEMIKEHTKIREKTLVEMFEKCKEKFNS------ESLSSLTDILIQAKMNAENNNTGEGQDPSVFSDKHILVTVGDIFGAGIETTSSVLNWILAFLVHNPEVKRKIQKEIDQYVGFSRTPSFNDRTHLLMLEATIREVLRIRPVAPLLIPHKANIDSSIGEFAIPKDTHVIINLWALHHDKNEWDQP 408          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18
Identity = 58/205 (28.29%), Postives = 98/205 (47.80%), Query Frame = 2
Query:  125 EYNYGDFIPILRPF-LRGYLKICKEVKER-----------RLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            E+N  DFI + +   L+G+ K  +++ +R           R Q  KD     +K    +     + L   +D   D  ++ +I   ++  ++ +   A  +TT  S EW + ELV  P + +K+R E+D V+G    + E D   LPYLQA++KET RL   +P +V    + +  +  Y +P +S + VN W +   P  W  P
Sbjct:  207 EFNVSDFIWLFKKMDLQGFGKRIEDLFQRFDTLVERIISKREQTRKDRRRNGKKGEQGSGDGIRDFLDILLDCTEDENSEIKIQRVHIKALIMDFFTAGTDTTAISTEWALVELVKKPSVLQKVREEIDNVVGKDRLVEESDCPNLPYLQAILKETFRLHPPVP-MVTRRCVAECTVENYVIPEDSLLFVNVWSIGRNPKFWDNP 410          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C75A7_EUSGR (Flavonoid 3',5'-hydroxylase OS=Eustoma grandiflorum GN=CYP75A7 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.508e-18
Identity = 64/234 (27.35%), Postives = 112/234 (47.86%), Query Frame = 2
Query:    8 MYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGE-INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            M N + ++M  +R         N  K +  E   +A  F  N GDFIP +    L+G     K +  ++        +EE    A  +  S + L   + +     ++GE +   N+  ++ N+  A  +T+   IEW +AEL+ +P I ++ + E+D V+G   +  E D  KLPYLQA+ KE  R   + PL +P +     ++ G+ +P  +++ VN W +   P+ W+ P
Sbjct:  184 MANMLGQVMLSKRVFGSQGSESNEFKDMVVELMTVAGYF--NIGDFIPSIAWMDLQGIQGGMKRL-HKKFDALLTRLLEEHTASAHERKGSPDFLDFVVAN--GDNSEGERLQTVNIKALLLNMFTAGTDTSSSVIEWALAELLKNPIILRRAQEEMDGVIGRDRRFLEADISKLPYLQAICKEAFRKHPSTPLNLPRIASQACEVNGHYIPKGTRLSVNIWAIGRDPSVWENP 412          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP1A3_ONCMY (Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1a3 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 63/227 (27.75%), Postives = 104/227 (45.81%), Query Frame = 2
Query:   35 FDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHI----LDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            F RR+   D  L   L  ++ E  ++  S   N  DFIPILR      +K   ++ +R    F    V E  + +  K    +     IDH     LD     +++++ ++ IV ++  A  +T   ++ W +  LV +PE Q++L  EL   +G        D   LP L+A I E  R    +P  +PH  + D  L GY +P ++ + +N W + + P  WK+P
Sbjct:  208 FGRRYSHDDQELLG-LVNMSDEFGQVVGSG--NPADFIPILRYLPNRTMKRFMDINDR-FNNFVQKIVSEHYE-SYDKDNIRDITDSLIDHCEDRKLDENANIQVSDEKIVGIVNDLFGAGFDTISTALSWAVVYLVAYPETQERLHQELKEKVGMIRTPRLSDKINLPLLEAFILEIFRHSSFLPFTIPHCTIKDTSLNGYFIPKDTCVFINQWQVNHDPELWKEP 429          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP1A2_CAVPO (Cytochrome P450 1A2 OS=Cavia porcellus GN=CYP1A2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 55/190 (28.95%), Postives = 88/190 (46.32%), Query Frame = 2
Query:  140 DFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDA-QTKGE-INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            DF PILR      L+  K+  +R LQ  +    E  +     K+   +       H  ++    G+ I    ++ +V +I  A  +T   +I W +  LV  PEIQKK+  ELD V+G   +    D  +LPY++A I E  R    +P  +PH    D  L G+ +P +  + +N W + + P  W+ P
Sbjct:  237 DFFPILRYLPNPMLQQFKDFNKRFLQFLQKTVQEHYQDF--DKNHVQDIASALFKHSEESPHVNGDLIPRKKIVNLVNDIFGAGFDTVTTAISWSLLYLVTKPEIQKKIHKELDAVIGRDRKPRLADRPQLPYMEAFILEVFRYSSFLPFTIPHCTTRDTILNGFYIPKDRCVFINQWQVNHDPKQWEDP 424          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_RAT (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus norvegicus GN=Cyp17a1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 66/242 (27.27%), Postives = 116/242 (47.93%), Query Frame = 2
Query:   14 NNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINED------------NVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            N +  I F+  +E ++DP    +K        +  + + N  D  P L  F    L++ K   + R ++    F + R+K  S      +S+    D ++ A+   + N              ++L  V +I  A IETT   ++W +A LV++PE++KK++ E+D  +G     T  D   L  L+A I+E LR+R   P+L+PH    D+ +G + VP ++ ++VN W L +    W +P
Sbjct:  176 NIICAICFNISYE-KNDPKLTAIKTFT--EGIVDATGDRNLVDIFPWLTIFPNKGLEVIKGYAKVRNEVLTGIFEKCREKFDS------QSISSLTDILIQAKMNSDNNNSCEGRDPDVFSDRHILATVGDIFGAGIETTTTVLKWILAFLVHNPEVKKKIQKEIDQYVGFSRTPTFNDRSHLLMLEATIREVLRIRPVAPMLIPHKANVDSSIGEFTVPKDTHVVVNLWALHHDENEWDQP 408          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C71BF_ARATH (Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=CYP71B15 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.193e-18
Identity = 53/158 (33.54%), Postives = 88/158 (55.70%), Query Frame = 2
Query:  266 KSMSNESLK------CAIDHILDAQTKGEINEDNVLY-------IVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWK 697
            +++ NE LK        +D ++D + K E + D + +       ++ +I VA I        WG+ EL+ +P + KK+++E+ T LG   + I E D ++L Y + V+KETLRL    PLL+P   +   K+ GYDVPA+++ILVN + +   P  W+
Sbjct:  249 QNVLNEHLKPGRESSTIVDLMIDMKKKQENDGDALKFTTDHLKGMISDIFVAGIGGVAGITLWGMTELIRNPRVMKKVQDEIRTTLGDKKERIKEEDLNQLHYFKLVVKETLRLHPTTPLLLPRQTMSHIKIQGYDVPAKTQILVNVYAMGRDPKLWE 406          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP1A1_LIZSA (Cytochrome P450 1A1 OS=Liza saliens GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 59/225 (26.22%), Postives = 105/225 (46.67%), Query Frame = 2
Query:   35 FDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLA--STKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            F RR++  D  L + L  L+ E  ++  S   N  DFIPIL+      +K    + +R +   +    E        + + +++  +    D  LD     +++++ V+ IV ++  A  +T   ++ W +  LV +PEIQ+ L  EL   +G        D + LP L++ I E  R    +P  +PH    D  L GY +P ++ + +N W + + P  WK+P
Sbjct:  208 FGRRYDHHDQELLS-LVNLSDEFGQVVGSG--NPADFIPILQYLPNKTMKKFVSINDRFISFVQKIVSEHYATFNKDNIRDITDSLIDHCEDRKLDENANVQMSDEKVVGIVNDLFGAGFDTISTALSWSVMYLVAYPEIQEXLYQELKENVGLDRTPVLSDRNNLPLLESFILEIFRHSSFLPFTIPHCTTKDTSLNGYYIPKDTCVFINQWQINHDPELWKEP 429          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP1A1_CHACA (Cytochrome P450 1A1 OS=Chaetodon capistratus GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 59/227 (25.99%), Postives = 110/227 (48.46%), Query Frame = 2
Query:   35 FDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILR----PFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            F RR++  D  L  RL  L+ E  ++A S   N  DFI ILR      ++ ++ I  +      ++  +++    K   + + +++  +    D  LD     +++++ ++ IV ++  A  +T   ++ W +  LV +P+IQ++L  E+   +G        D  K+PYL+A I E  R    +P  +PH +  D  L GY +P ++ + +N W +   P  WK P
Sbjct:  208 FGRRYDHNDQDLL-RLVNLSDEFGQVAGSG--NPADFINILRFLPSTTMKKFMTINADFNTFVKKIVGEHYATFDKN--NIRDITDSLIDHCEDRKLDENCNVQMSDEKIVGIVNDLFGAGFDTVSTALSWSVMYLVAYPDIQERLFQEIKDNVGLDRTPLLSDRSKVPYLEAFILELFRHSSFLPFTIPHCSAKDTSLNGYFIPKDTCVFINQWQINRDPELWKDP 429          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C78A3_SOYBN (Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.395e-18
Identity = 45/151 (29.80%), Postives = 80/151 (52.98%), Query Frame = 2
Query:  254 LASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLV-PHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            +A  ++   E+ +  +D +L      ++++ +++ ++  +     +T    IEW +A +  HP +Q K++ ELD V+G    + E D   + YL AV+KE LRL    PLL    ++++D  + GY VPA +  +VN W +   P  WK P
Sbjct:  281 IAEHRASKTETNRDFVDVLLSLPEPDQLSDSDMIAVLWEMIFRGTDTVAVLIEWILARMALHPHVQSKVQEELDAVVGKARAVAEDDVAVMTYLPAVVKEVLRLHPPGPLLSWARLSINDTTIDGYHVPAGTTAMVNTWAICRDPHVWKDP 431          
The following BLAST results are available for this feature:
BLAST of FC931077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
CP17A_MOUSE5.508e-1828.10Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]
C93B1_GLYEC5.508e-1828.29Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C75A7_EUSGR5.508e-1827.35Flavonoid 3',5'-hydroxylase OS=Eustoma grandifloru... [more]
CP1A3_ONCMY7.193e-1827.75Cytochrome P450 1A3 OS=Oncorhynchus mykiss GN=cyp1... [more]
CP1A2_CAVPO7.193e-1828.95Cytochrome P450 1A2 OS=Cavia porcellus GN=CYP1A2 P... [more]
CP17A_RAT7.193e-1827.27Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rattus... [more]
C71BF_ARATH7.193e-1833.54Cytochrome P450 71B15 OS=Arabidopsis thaliana GN=C... [more]
CP1A1_LIZSA9.395e-1826.22Cytochrome P450 1A1 OS=Liza saliens GN=cyp1a1 PE=2... [more]
CP1A1_CHACA9.395e-1825.99Cytochrome P450 1A1 OS=Chaetodon capistratus GN=cy... [more]
C78A3_SOYBN9.395e-1829.80Cytochrome P450 78A3 OS=Glycine max GN=CYP78A3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC34101B09EF PostHarvP1 Citrus clementina cDNA clone C34101B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931077 ID=FC931077; Name=FC931077; organism=Citrus clementina; type=EST; length=704bp
GCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCG
AGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGTGAG
AGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTTTATTCC
CATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTA
AAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAG
AAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAAT
CGATCATATTTTGGACGCTCAGACAAAGGGAGAAATCAACGAGGACAACG
TTCTATACATCGTTGAGAACATCAATGTTGCCGCGATCGAGACAACTCTT
TGGTCGATCGAGTGGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCA
GAAGAAGCTCCGCAATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAA
TCACTGAGCCTGACACCCACAAACTACCCTACCTTCAGGCCGTGATCAAG
GAAACTCTTCGCCTTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAA
CCTTCACGACGCCAAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAA
TCCTAGTGAACGCGTGGTGGCTCGCCAACNATCCCGCCCCATGGAAGAAA
CCTG
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