FC931077

Overview
NameFC931077
Unique NameFC931077
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15266 contig Ccv1_Contig15266:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C80A1_BERST (Berbamunine synthase OS=Berberis stolonifera GN=CYP80A1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 44/132 (33.33%), Postives = 68/132 (51.52%), Query Frame = 2
Query:  308 ILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            +LD     + NE  +  +         +T    IEW +A+L+ +P+   KLR ELD V+G    + E    +LPYLQA +KET+RL   I +++PH  +   ++ GY +P    + VNA  +   P  WK P
Sbjct:  266 MLDVLIANDFNEHQINAMFMETFGPGSDTNSNIIEWALAQLIKNPDKLAKLREELDRVVGRSSTVKESHFSELPYLQACVKETMRLYPPISIMIPHRCMETCQVMGYTIPKGMDVHVNAHAIGRDPKDWKDP 397          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 46/163 (28.22%), Postives = 88/163 (53.99%), Query Frame = 2
Query:  215 QLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            +L +   VE  KK    +      +   ++   D + + +I  +++  +   + +   +T+  +I+W +AEL+N+  + K+LR E+D+V+G    I E D  KLPYLQ+V+KE LRL   +PL+V        ++ G+ +  ++ ++VNA+ +   P  W+ P
Sbjct:  255 ELLERIIVEREKK--PNEHQGTYLMDVLLEAYEDEKAEHKITRNHIKSLFVELLLGGTDTSAQTIQWTMAELINNRNVLKRLREEIDSVVGETRLIQEKDLPKLPYLQSVVKEGLRLHPPLPLMVRTFQ-RSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDP 414          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 38/125 (30.40%), Postives = 70/125 (56.00%), Query Frame = 2
Query:  329 GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            G++  +++  I+ N+ +  I T+  ++ W + EL+ +P + KK+++E+   +G    IT  D  +L YL+ VI ET RL    P L+P   + + +L  Y +P ++++ VN W +   P  WK P
Sbjct:  284 GKLTRNHIKAILMNVLIGGIGTSAITMTWAMTELMRNPRVMKKVQSEIRNQIGKKSMITLDDIDQLHYLKMVINETWRLHPPSPFLIPRQVMSEFELNDYVIPVKTRLYVNVWAIGRDPDTWKDP 408          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.022e-16
Identity = 41/128 (32.03%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  329 GEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ---ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            G++  +++  I+ NI +  I T+  ++ W +AEL+ +P + KK+++E+   +G  ++   I+  + + L YL  VIKET RL    PLLVP   + + K+ GY +  ++++ VN W +   P  WK P
Sbjct:  284 GKLTRNHIKAILMNILLGGINTSAITMTWAMAELIRNPRVMKKVQSEIRAQIGKNNKTRIISLDEINHLSYLNMVIKETCRLHPVAPLLVPREVISEFKINGYTIQPKTRLHVNVWAIGRDPEIWKDP 411          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP2E1_RABIT (Cytochrome P450 2E1 OS=Oryctolagus cuniculus GN=CYP2E1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 61/222 (27.48%), Postives = 104/222 (46.85%), Query Frame = 2
Query:   11 YNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINV-------AAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKIL 655
            +N + +I+F+ RF+ +D      +   N     L+  +   Y +F   L+     + K+ K V E      K+Y +   K+    KS+     +  ID +L    K + +    LY +ENI V       A  ETT  ++ +G+  L+ HPEI++KL  E+D V+GP    +  D  ++PY+ AV+ E  R    +P  +PH    D    GY +P  + ++
Sbjct:  177 FNVIAKILFNDRFDYKDKQALRLMSLFNENFYLLSTPWLQVYNNFSNYLQYMPGSHRKVIKNVSE-----IKEYTLARVKE--HHKSLDPSCPRDFIDSLLIEMEKDK-HSTEPLYTLENIAVTVADMFFAGTETTSTTLRYGLLILLKHPEIEEKLHEEIDRVIGPSRMPSVRDRVQMPYMDAVVHEIQRFIDLVPSNLPHEATRDTTFQGYVIPKGTVVI 390          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP17A_PIG (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Sus scrofa GN=CYP17A1 PE=2 SV=3)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 63/246 (25.61%), Postives = 120/246 (48.78%), Query Frame = 2
Query:    2 LMMYNNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEIN------------EDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            L M N +  I F+  F+  D  L   +   +G    + +   Y   D  P +R      L+  K+    R +L ++  +E RK+  S  S++N      +D ++ A+T  E N            + ++L  V +I  A +ET+   ++W +A L+++P ++KK+++ +D  +G     +  D ++L  L+A I+E LR R   P L+PH  + D+ +G + +  ++ ++VN W L +    W +P
Sbjct:  173 LAMTNIVSFICFNFSFKKGDPALQAIVNFNDGILDAVGKEILY---DMFPGIRILPSQTLENMKQCVRMRNELLRE-ILENRKENYSRNSITN-----LLDIMIQAKTNAESNTGGPDHNLKLLSDRHMLATVADIFGAGVETSASVVKWIVAFLLHYPLLRKKIQDAIDQNIGFNRAPSISDRNQLVLLEATIREVLRFRPVSPTLIPHRAIIDSSIGEFTIDKDTDVVVNLWALHHNEKEWHRP 409          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C516B_DICDI (Probable cytochrome P450 516B1 OS=Dictyostelium discoideum GN=cyp516b1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 53/191 (27.75%), Postives = 93/191 (48.69%), Query Frame = 2
Query:  131 NYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            N  D++P L+PF             +      D     RK L   K    + L   +  I  ++ K   ++D++   + ++ VA  ET   ++ W I  L NH ++Q+K+ +EL  V+G G+           YL A I+ET+R+R A PL +P +   D K+GGY +P  ++++++ + +A+    WK P
Sbjct:  206 NPHDYLPFLKPFYTKKRNTLAMAVGQVWDYCNDAITVHRKTLDHEKP--RDLLDLILMEIEKSEEKQFYDDDSLSKCLTDLIVAGHETVAITLGWMILFLSNHQDVQQKVYDELINVVGKGNLPALVHRKDTSYLNACIQETMRIRTAAPLALPRIASEDIKVGGYTIPKGTQVMMSVYGMASDERYWKDP 394          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: C513F_DICDI (Probable cytochrome P450 513F1 OS=Dictyostelium discoideum GN=cyp513f1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.947e-16
Identity = 62/204 (30.39%), Postives = 98/204 (48.04%), Query Frame = 2
Query:  134 YGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFV----------EERKKLA----STKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            Y DFIPIL PF          +   R   FKD+ V          ++  KL     + K    E  K  ++  L+    GEI  ++VL    N+ +A  +++  ++ + +  L+N+PEIQ+K+ NE+ T L    +I+  D  K PY  AVIKET RL    PL  PH   +D ++ G+ +   ++I+ N +  +     W KP
Sbjct:  224 YSDFIPILLPF--------DLINLSRNNFFKDFQVLTNFVSKNVNQQLSKLNDNNNNNKEKEGEERKSIVEAYLENYLNGEIKFESVLSSCTNLLLAGTDSSANTLSFLLVSLINNPEIQEKVYNEIITNL-KNDEISINDRFKCPYTCAVIKETHRLYSIAPLSEPHYCSNDVEIKGFKIAKGTQIIQNIYSSSRSEQYWDKP 418          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP2DF_CANFA (Cytochrome P450 2D15 OS=Canis familiaris GN=CYP2D15 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 55/232 (23.71%), Postives = 107/232 (46.12%), Query Frame = 2
Query:   14 NNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQ--TKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            N +  + + RRFE  DDP   +L  L  +  +    F     + IP+L        K+     ++ +    +  ++E +K           +   +D I  A+   K   NE+N+  +  ++ +A + +T  ++ W +  ++ HP++Q++++ E+D V+G        D  ++P+  AVI E  R    +PL VPHM   D ++ G+ +P  + ++ N   +      WKKP
Sbjct:  187 NVISSLTYGRRFE-YDDPRLLQLLELTQQALKQDSGFLREALNSIPVLLHIPGLASKVFSA--QKAIITLTNEMIQEHRKTRDPTQPPRHLIDAFVDEIEKAKGNPKTSFNEENLCMVTSDLFIAGMVSTSITLTWALLLMILHPDVQRRVQQEIDEVIGREQLPEMGDQTRMPFTVAVIHEVQRFGDIVPLGVPHMTSRDTEVQGFLIPKGTTLITNLSSVLKDEKVWKKP 415          
BLAST of FC931077 vs. ExPASy Swiss-Prot
Match: CP1A4_CHICK (Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.155e-16
Identity = 60/234 (25.64%), Postives = 104/234 (44.44%), Query Frame = 2
Query:   14 NNMYRIMFDRRFESQDDPLFNRLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEI----NEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANXPAPWKKP 703
            N +  I F +R++  D  L + +  +N E   +A +   N  DFIP+LR      +   K+V  R    F    V+        K    +     I H  + +T  ++    ++++++ IV ++  A  +T   ++ W +     +P IQKK++ ELD  +G   +    D   LPY +A I E  R    +P  +PH    D  L GY +P ++ + +N W   +    WK P
Sbjct:  207 NVICAICFGKRYDHDDQELLSVVN-MNTEFGDVAAAG--NPADFIPLLRYLPNRAMAAFKDVNAR-FSAFVQKIVQNHYSTFD-KEHIRDVTDSLIGHCQEKRTGEDVRVQPSDESIISIVNDLFGAGFDTVTTALSWCMMYAALYPHIQKKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEAFRHSSLLPFTIPHCTTKDTVLNGYYIPKDTCVFINQWQANHDEKIWKDP 435          
The following BLAST results are available for this feature:
BLAST of FC931077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 311
Match NameE-valueIdentityDescription
C80A1_BERST3.022e-1633.33Berbamunine synthase OS=Berberis stolonifera GN=CY... [more]
C75AK_ARATH3.022e-1628.22Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C71BX_ARATH3.022e-1630.40Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71BA_ARATH3.022e-1632.03Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
CP2E1_RABIT3.947e-1627.48Cytochrome P450 2E1 OS=Oryctolagus cuniculus GN=CY... [more]
CP17A_PIG3.947e-1625.61Steroid 17-alpha-hydroxylase/17,20 lyase OS=Sus sc... [more]
C516B_DICDI3.947e-1627.75Probable cytochrome P450 516B1 OS=Dictyostelium di... [more]
C513F_DICDI3.947e-1630.39Probable cytochrome P450 513F1 OS=Dictyostelium di... [more]
CP2DF_CANFA5.155e-1623.71Cytochrome P450 2D15 OS=Canis familiaris GN=CYP2D1... [more]
CP1A4_CHICK5.155e-1625.64Cytochrome P450 1A4 OS=Gallus gallus GN=CYP1A4 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34101B09EF PostHarvP1 Citrus clementina cDNA clone C34101B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931077 ID=FC931077; Name=FC931077; organism=Citrus clementina; type=EST; length=704bp
GCTTATGATGTACAACAACATGTACAGGATTATGTTTGATAGAAGATTCG
AGAGTCAGGATGATCCTTTGTTTAACAGATTAAAGGCTTTGAATGGTGAG
AGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGTGATTTTATTCC
CATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTGTAAGGAAGTTA
AAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTGAGGAGAGAAAG
AAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTGAAATGCGCAAT
CGATCATATTTTGGACGCTCAGACAAAGGGAGAAATCAACGAGGACAACG
TTCTATACATCGTTGAGAACATCAATGTTGCCGCGATCGAGACAACTCTT
TGGTCGATCGAGTGGGGAATTGCAGAGCTAGTGAATCATCCTGAAATCCA
GAAGAAGCTCCGCAATGAACTTGACACCGTGCTTGGTCCTGGTCATCAAA
TCACTGAGCCTGACACCCACAAACTACCCTACCTTCAGGCCGTGATCAAG
GAAACTCTTCGCCTTAGGATGGCAATTCCTCTTCTTGTGCCGCACATGAA
CCTTCACGACGCCAAGCTTGGAGGCTACGACGTCCCTGCTGAGAGCAAAA
TCCTAGTGAACGCGTGGTGGCTCGCCAACNATCCCGCCCCATGGAAGAAA
CCTG
back to top