FC931086

Overview
NameFC931086
Unique NameFC931086
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15313 contig Ccv1_Contig15313:26..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_PIG (Heat shock protein HSP 90-alpha OS=Sus scrofa GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 2.354e-75
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 2 
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            FSKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  442 FSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 658
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_PANTR (Heat shock protein HSP 90-alpha OS=Pan troglodytes GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.354e-75
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 2 
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            FSKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  442 FSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 658
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_MACFA (Heat shock protein HSP 90-alpha OS=Macaca fascicularis GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 2.354e-75
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 2 
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            FSKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  442 FSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 658
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_HUMAN (Heat shock protein HSP 90-alpha OS=Homo sapiens GN=HSP90AA1 PE=1 SV=5)

HSP 1 Score: 281.952 bits (720), Expect = 2.354e-75
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 2 
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            FSKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  441 FSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 657
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_BOVIN (Heat shock protein HSP 90-alpha OS=Bos taurus GN=HSP90AA1 PE=2 SV=3)

HSP 1 Score: 281.952 bits (720), Expect = 2.354e-75
Identity = 137/217 (63.13%), Postives = 167/217 (76.96%), Query Frame = 2 
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            FSKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  442 FSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 658
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90B_DANRE (Heat shock protein HSP 90-beta OS=Danio rerio GN=hsp90ab1 PE=2 SV=2)

HSP 1 Score: 281.567 bits (719), Expect = 3.074e-75
Identity = 138/218 (63.30%), Postives = 168/218 (77.06%), Query Frame = 2 
Query:    2 SFSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            +FSKNL LGIHEDS N+ KL+ELLRY S++SGDE+TSL +YV+RMKE Q  IYYITGESK  V +S F+E++ K+G+EVLYM + IDEY V QLK+F+GK LVS TKEGL+L E EDEKK  E  K KFE LCK++K++L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM +KK +EINP++PIME LR++A+ADKNDK
Sbjct:  431 AFSKNLKLGIHEDSQNRKKLSELLRYQSSQSGDEMTSLTEYVSRMKENQKSIYYITGESKDQVAHSAFVERVCKRGFEVLYMTEPIDEYCVQQLKDFDGKSLVSVTKEGLELPEDEDEKKKMEEDKAKFENLCKLMKEILDKKVEKVTVSNRLVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIMETLRQKAEADKNDK 648
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_CHICK (Heat shock protein HSP 90-alpha OS=Gallus gallus GN=HSP90AA1 PE=3 SV=3)

HSP 1 Score: 281.567 bits (719), Expect = 3.074e-75
Identity = 136/217 (62.67%), Postives = 167/217 (76.96%), Query Frame = 2 
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            FSKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  +YYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  437 FSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHVYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKAKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 653
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_RAT (Heat shock protein HSP 90-alpha OS=Rattus norvegicus GN=Hsp90aa1 PE=1 SV=3)

HSP 1 Score: 280.411 bits (716), Expect = 6.849e-75
Identity = 136/217 (62.67%), Postives = 167/217 (76.96%), Query Frame = 2 
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            FSKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IY+ITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  442 FSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 658
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_MOUSE (Heat shock protein HSP 90-alpha OS=Mus musculus GN=Hsp90aa1 PE=1 SV=4)

HSP 1 Score: 280.411 bits (716), Expect = 6.849e-75
Identity = 136/217 (62.67%), Postives = 167/217 (76.96%), Query Frame = 2 
Query:    5 FSKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            FSKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IY+ITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  442 FSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 658
[Close]
BLAST of FC931086 vs. ExPASy Swiss-Prot
Match: HS90A_HORSE (Heat shock protein HSP 90-alpha (Fragment) OS=Equus caballus GN=HSP90AA1 PE=2 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.168e-74
Identity = 136/216 (62.96%), Postives = 166/216 (76.85%), Query Frame = 2 
Query:    8 SKNLNLGIHEDSTNKTKLAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKMKETLKEKFEGLCKVIKDVLGXXXXXXXXXXXXXXXPCCLVTGEYGWTANMERIMKAQALRDNSMAGYMSSKKTMEINPENPIMEELRKRADADKNDK 655
            SKN+ LGIHEDS N+ KL+ELLRY+++ SGDE+ SLKDY TRMKE Q  IYYITGE+K  V NS F+E+L+K G EV+YM++ IDEY V QLKEFEGK LVS TKEGL+L E E+EKK +E  K KFE LCK++KD+L                PCC+VT  YGWTANMERIMKAQALRDNS  GYM++KK +EINP++ I+E LR++A+ADKNDK
Sbjct:  432 SKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDK 647
The following BLAST results are available for this feature:
BLAST of FC931086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 374
Match NameE-valueIdentityDescription
HS90A_PIG2.354e-7563.13Heat shock protein HSP 90-alpha OS=Sus scrofa GN=H... [more]
HS90A_PANTR2.354e-7563.13Heat shock protein HSP 90-alpha OS=Pan troglodytes... [more]
HS90A_MACFA2.354e-7563.13Heat shock protein HSP 90-alpha OS=Macaca fascicul... [more]
HS90A_HUMAN2.354e-7563.13Heat shock protein HSP 90-alpha OS=Homo sapiens GN... [more]
HS90A_BOVIN2.354e-7563.13Heat shock protein HSP 90-alpha OS=Bos taurus GN=H... [more]
HS90B_DANRE3.074e-7563.30Heat shock protein HSP 90-beta OS=Danio rerio GN=h... [more]
HS90A_CHICK3.074e-7562.67Heat shock protein HSP 90-alpha OS=Gallus gallus G... [more]
HS90A_RAT6.849e-7562.67Heat shock protein HSP 90-alpha OS=Rattus norvegic... [more]
HS90A_MOUSE6.849e-7562.67Heat shock protein HSP 90-alpha OS=Mus musculus GN... [more]
HS90A_HORSE1.168e-7462.96Heat shock protein HSP 90-alpha (Fragment) OS=Equu... [more]

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Properties
Property NameValue
Genbank descriptionC34101C07EF PostHarvP1 Citrus clementina cDNA clone C34101C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931086 ID=FC931086; Name=FC931086; organism=Citrus clementina; type=EST; length=733bp
GTCATTCTCTAAGAACCTAAATCTTGGTATCCACGAGGACTCCACCAACA
AGACCAAGCTTGCTGAGCTGCTCCGATACCATTCCACCAAGAGTGGTGAT
GAGTTGACTAGCTTGAAGGACTATGTGACCAGAATGAAGGAAGGCCAGAA
TGATATCTACTACATCACTGGTGAGAGCAAGAAGGCTGTTGAGAACTCCC
CATTTCTTGAGAAGCTCAAGAAGAAGGGCTATGAAGTGCTCTACATGGTT
GATGCCATAGATGAGTACGCTGTTGGTCAGCTCAAGGAGTTTGAGGGAAA
GAAGCTTGTCTCAGCGACCAAAGAAGGTCTCAAGCTTGATGAGAGTGAAG
ATGAGAAGAAGATGAAGGAAACCTTGAAGGAGAAATTTGAGGGTCTCTGC
AAGGTGATCAAGGATGTTTTGGGTGACAAGGTCGAGAAGGTTGTGGTGTC
TGACCGTGTTGTTGACTCACCCTGCTGTTTGGTGACTGGTGAGTATGGAT
GGACAGCCAACATGGAGAGGATCATGAAGGCTCAGGCCTTGAGAGACAAC
AGCATGGCTGGTTACATGTCCAGCAAGAAGACCATGGAGATCAATCCGGA
GAACCCCATCATGGAGGAGCTCAGGAAGAGGGCTGATGCGGACAAGAATG
ACAAGTCTGTGAAGGACCTTGTCCTTCTGCTCTTTGAACTGCTCTCCTCA
CTTCTGGTTNCAGCCTTGATGACCCTACACTTT
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