FC931087

Overview
NameFC931087
Unique NameFC931087
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15270 contig Ccv1_Contig15270:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC931087 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.646e-12
Identity = 51/189 (26.98%), Postives = 95/189 (50.26%), Query Frame = 3 
Query:   72 SYYGKKPEMNGLMRKAMSGVSVPFMTSVLDGYDG---FKGVKRLVDVGGSAGDCLRMILQKHPFICEGINFDLPEVVA---EAPSIPGVTHIGGDMFKSIPAADAIFMKWVLTTWTDDECKLIMENCYKALPAGGKLIACEPVLPDDSNESQRTRALLEGDIFVMTIYRAKGKHRTEQEFKQLGLSAGF 620
            S Y ++ E N + +   +   + + T +L    G       + +VD+GGS G  +  +L ++P +  GINFD   V+    E    P + H+ GD FKS+P AD   MK +L  ++D++C  +++   K++ +  K+I  + +L  DS++       L+    ++ +    GK R+  E+ +L   +GF
Sbjct:  132 SDYWEQIEKNEIYKNEFNDGMIGYTTHILKFLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNV-NGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSMKSNAKIIILDIIL--DSSKYLNFDTYLD----ILMMETLDGKQRSLSEWIKLFEMSGF 313
The following BLAST results are available for this feature:
BLAST of FC931087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
OMT11_DICDI4.646e-1226.98Probable inactive O-methyltransferase 11 OS=Dictyo... [more]

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Properties
Property NameValue
Genbank descriptionC34101C08EF PostHarvP1 Citrus clementina cDNA clone C34101C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931087 ID=FC931087; Name=FC931087; organism=Citrus clementina; type=EST; length=721bp
CTTTGGTGCACGAGGCCGTTCTGGACCCAACTATTGAGCCATTTGTGAAA
GTCCATGGCGAGCCGGCATATAGTTATTATGGGAAGAAGCCTGAAATGAA
CGGCTTGATGCGAAAAGCCATGTCGGGAGTGTCCGTGCCGTTCATGACGT
CCGTTTTGGACGGTTACGATGGGTTCAAAGGTGTGAAGCGATTGGTTGAT
GTGGGTGGGAGTGCAGGTGATTGCCTGAGGATGATATTACAGAAACATCC
TTTTATATGTGAAGGGATCAATTTTGATTTGCCTGAGGTTGTTGCCGAAG
CTCCAAGTATCCCTGGAGTGACCCATATTGGTGGGGACATGTTTAAGTCC
ATTCCTGCCGCTGATGCTATCTTTATGAAGTGGGTTTTAACTACATGGAC
TGACGATGAATGCAAGCTGATAATGGAGAACTGTTACAAGGCTCTTCCGG
CAGGAGGAAAACTGATTGCTTGTGAGCCCGTGCTGCCTGATGATTCAAAC
GAGAGTCAGAGGACGCGTGCTCTCTTAGAAGGGGACATTTTTGTAATGAC
CATCTACAGGGCCAAAGGTAAACACAGGACTGAACAAGAGTTTAAGCAAC
TTGGTCTCTCTGCTGGTTTTCCACACTTGAGAGCTTTTTATGTCGATTAT
TTTCACACTCTTCTTGAGTTCCNAAAGTAATTTTAGTTTCTGGATCCTTA
AAGACTTGGGGAATATTTGTG
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