FC931092

Overview
NameFC931092
Unique NameFC931092
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931092_ssr36 microsatellite FC931092_ssr36:36..47. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig15281 contig Ccv1_Contig15281:5..672. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.214e-40
Identity = 86/190 (45.26%), Postives = 127/190 (66.84%), Query Frame = 1
Query:   91 SWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKALAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTS 651
            SWLV  L+  GY V+A+VRDP + KK   LL L GA  +L ++KA+L EEGSFD  + GC GV H A+P   ++KDP+ E++ P +KG L+++ +C K  +++R++ TSS A  LN  + + P  + DE+ +SD E C++ ++  W Y +SK LAE  AWKFAKE  +D++TI P +V+GP L PT+  S
Sbjct:    2 SWLVMRLMEPGYMVRATVRDPENLKKVSPLLELPGAKSKLSIWKADLGEEGSFDEAIKGCTGVFHVATPMDFESKDPENEMIKPTIKGVLDIMKACLKAKTVRRLIYTSS-AGTLNVTEDQKP--LWDESCWSDVEFCRRVKMTGWMYFVSKTLAEQEAWKFAKEHKMDVITIIPPLVVGPFLIPTMPPS 188          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.704e-40
Identity = 92/213 (43.19%), Postives = 139/213 (65.26%), Query Frame = 1
Query:   25 MSSVAAAAGK-VVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSEL--W-YPLSKALAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTS 651
            M   A A+ K  V VTGASG++ SWLV  LL  GYTV+A+VRDP +  KT+ L+ L GA+ERL ++KA+L EEGSF   + GC GV H A+P    +KDP+ E++ P V+G ++++ +C +  +++R+V TSS A  +N  + + P  V DE  ++D + C++ ++  W Y +SK LAE AA  +A E  +DLVTI P +V+GP +  ++  S
Sbjct:    1 MERGAGASEKGTVLVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVGKTKPLMDLPGATERLSIWKADLAEEGSFHDAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSS-AGTVNLEERQRP--VYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPS 210          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.659e-39
Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 1
Query:   58 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVC---KQSELWYPLSKALAEDAAWKFAKEKSIDLVTINPAMVIGPLLQPTLNTS 651
            V VTG +G+I SWLV  LL RGY V A+VRDP + KK +HLL L  A   L L+KA+L  EGSFD  + GC GV H A+P   ++KDP+ E++ P V+G L+++ SCAK  ++KR+V TSS A  L+  + +   +  DET +SD +     K +   Y +SK LAE AA + A++ +ID ++I P +V+GP +  T   S
Sbjct:   20 VWVTGGAGFIGSWLVMRLLERGYNVHATVRDPENQKKVKHLLELPKADTNLTLWKADLAVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSS-AGTLDVQEDQ--KLFYDETSWSDLDFIYAKKMTGWMYFVSKILAEKAAMEEARKNNIDFISIIPPLVVGPFITSTFPPS 217          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: BAN_ARATH (Leucoanthocyanidin reductase OS=Arabidopsis thaliana GN=BAN PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 84/193 (43.52%), Postives = 121/193 (62.69%), Query Frame = 1
Query:   52 KVVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDPEVCKQSELW---YPLSKALAEDAAWKFAKEKSIDLVTINPAMVIG 621
            K  CV G +G +AS L+K LL  GY V  +VRDP + KK  HL  L    + L++FKA+L +E SF+S   GC+ + H A+P    ++DP+ +++ PA++G +NVL SC K  S+KRV+ TSS AAV       T  V+ +E W +D E   + + +   YP+SK LAE  AW+FAKE  I+LVT+ PA++ G
Sbjct:   11 KKACVIGGTGNLASILIKHLLQSGYKVNTTVRDPENEKKIAHLRKLQELGD-LKIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSKSVKRVIYTSSAAAVSINNLSGTGIVMNEENW-TDVEFLTEEKPFNWGYPISKVLAEKTAWEFAKENKINLVTVIPALIAG 201          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: YKJ7_SCHPO (Putative uncharacterized oxidoreductase C513.07 OS=Schizosaccharomyces pombe GN=SPAC513.07 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.443e-26
Identity = 79/217 (36.41%), Postives = 122/217 (56.22%), Query Frame = 1
Query:   46 AGKVVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALD-GASERLQ-LFKANLLEEGSFDSIVDGCDGVCHTASPFY-HDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTG-KPRTPDVVVDETW----FSDPEVCKQSELWYPLSKALAEDAAWKFAKEK--SIDLVTINPAMVIGPLLQP-----TLNTS 651
            +GK+V VTG +G+I + + + LL  GY V+ +VR     +K   L+ L+ G  ++++ +   ++    +FD ++   + +CH ASPF+  +  D + +LLDPAVKGTL +L +     SIKR+V+TSS AAV N    P    V  ++ W    + +        + Y  SK LAE+AA ++ KEK  S D+ TINP  V GP + P     +LNTS
Sbjct:    2 SGKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSM---EKADELIRLNPGLKDKIEFVIVKDVSASNAFDGVLKDVELICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKSIKRIVITSSFAAVGNFQIDPHNNKVYTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAAREYVKEKKPSYDICTINPPYVYGPPIHPMKNMDSLNTS 215          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: ALD2_SPOSA (Aldehyde reductase 2 OS=Sporobolomyces salmonicolor PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 1.822e-20
Identity = 71/208 (34.13%), Postives = 101/208 (48.56%), Query Frame = 1
Query:   49 GKVVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQLFKANLLEEGSFDSIVDGCDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKFPSIKRVVLTSSMAAVLNTGKPRTPDVVVDE-TWFSD--------PEVCKQSELW-YPLSKALAEDAAWKFAKEKS--IDLVTINPAMVIGPLLQP 636
            G +V VTGA+G++AS +V+ LL  GY V+ + R  +     +                 ++L++G++D ++ G  GV H AS      K  +V  + PA+ GTLN L + A  PS+KR VLTSS  + L   KP    + +DE +W  +        PE   Q  LW Y  SK  AE AAWKF  E      L  + P   IG +  P
Sbjct:   12 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEV--VTPAIGGTLNALRAAAATPSVKRFVLTSSTVSAL-IPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDP 216          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: YD541_YEAST (Putative uncharacterized oxidoreductase YDR541C OS=Saccharomyces cerevisiae GN=YDR541C PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.923e-20
Identity = 72/205 (35.12%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   58 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQL-FKANLLEEGSFDSIVDGCDG----VCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKF--PSIKRVVLTSSMAAVLNTGKPRTPDVVVDETWFSDP--EVCKQSEL-WYPLSKALAEDAAWKFAKEK----SIDLVTINPAMVIGPLL 630
            V V+GASG+IA  ++  LL + Y V  +VR     +K   LL     +  L L    ++    +FD ++         V HTASPF++D  + + +LL PA++GT N+LNS  K+   +++RVV+TSS  A++   K   P VV  E  +++   E C+   +  Y  SK  AE AAW+F KE        L T+NP+++ GP L
Sbjct:    5 VLVSGASGFIALHILSQLLKQDYKVIGTVRSH---EKEAKLLRQFQHNPNLTLEIVPDISHPNAFDKVLQKRGREIRYVLHTASPFHYDTTEYEKDLLIPALEGTKNILNSIKKYAADTVERVVVTSSCTAIITLAKMDDPSVVFTEESWNEATWESCQIDGINAYFASKKFAEKAAWEFTKENEDHIKFKLTTVNPSLLFGPQL 206          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: GRE2_YEAST (NADPH-dependent methylglyoxal reductase GRE2 OS=Saccharomyces cerevisiae GN=GRE2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.885e-17
Identity = 77/221 (34.84%), Postives = 109/221 (49.32%), Query Frame = 1
Query:   58 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQL-FKANLLEEGSFDSIVD--GCDG--VCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKF--PSIKRVVLTSSMAAVLNTGKPRTPDVVVDE------TWFSDPEVCKQSEL-WYPLSKALAEDAAWKFAKEK----SIDLVTINPAMVIGPLL-----QPTLNTS 651
            V V+GA+G+IA  +V LLL   Y V  S R     +K  +L    G + +  +    ++ +  +FD +    G D   V HTASPF  D  D + +LL PAV G   +L+S  K+   S++RVVLTSS AAV +  K     +  +E      TW    E C+   +  Y  SK  AE AAW+F +E       +L  +NP  V GP +     +  LNTS
Sbjct:    3 VFVSGANGFIAQHIVDLLLKEDYKVIGSARSQ---EKAENLTEAFGNNPKFSMEVVPDISKLDAFDHVFQKHGKDIKIVLHTASPFCFDITDSERDLLIPAVNGVKGILHSIKKYAADSVERVVLTSSYAAVFDMAKENDKSLTFNEESWNPATW----ESCQSDPVNAYCGSKKFAEKAAWEFLEENRDSVKFELTAVNPVYVFGPQMFDKDVKKHLNTS 216          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: YGP7_YEAST (Putative uncharacterized oxidoreductase YGL157W OS=Saccharomyces cerevisiae GN=YGL157W PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.722e-16
Identity = 71/218 (32.57%), Postives = 113/218 (51.83%), Query Frame = 1
Query:   58 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQL-FKANLLEEGSFDSIVDGCDG----VCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKF--PSIKRVVLTSSMAAVLNTGKPRTPDVVV-DETWFSDP-EVCKQSEL-WYPLSKALAEDAAWKFAKEK----SIDLVTINPAMVIGP-----LLQPTLNTSA 654
            V V+GA+G+IA  ++  LL  GYTV  S R     +K   LL     + +L +    ++    +FD +          V HTASPF+ +  + + +LL PAV GT ++L +  K+   ++++V++TSS AA++        D+V+ +E+W  D  + C+ + +  Y  SK  AE  AW+F KE        L TINP  V GP      L+  +NTS+
Sbjct:    7 VFVSGATGFIALHIMNDLLKAGYTVIGSGRSQ---EKNDGLLKKFNNNPKLSMEIVEDIAAPNAFDEVFKKHGKEIKIVLHTASPFHFETTNFEKDLLTPAVNGTKSILEAIKKYAADTVEKVIVTSSTAALVTPTDMNKGDLVITEESWNKDTWDSCQANAVAAYCGSKKFAEKTAWEFLKENKSSVKFTLSTINPGFVFGPQMFADSLKHGINTSS 221          
BLAST of FC931092 vs. ExPASy Swiss-Prot
Match: YGD9_YEAST (Putative uncharacterized oxidoreductase YGL039W OS=Saccharomyces cerevisiae GN=YGL039W PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.931e-15
Identity = 70/206 (33.98%), Postives = 105/206 (50.97%), Query Frame = 1
Query:   55 VVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTRHLLALDGASERLQL-FKANLLEEGSFDSIVDG----CDGVCHTASPFYHDAKDPQVELLDPAVKGTLNVLNSCAKF--PSIKRVVLTSSMAAVLNTGKPR-TPDVVVDETWFSDP-EVCKQSEL-WYPLSKALAEDAAWKFAKEK----SIDLVTINPAMVIGPLL 630
            VV V+GA+G+IA  +V  LL  GY V  S R     +K   LL    ++  L +    ++    +FD +          V H ASP + +  D + +LL PAV GT ++L +   +   ++++VV+TSS+AA+ + G  + T  VV +E+W  D  E C+ + +  Y  SK  AE  AW F +E        L TINP  V GP L
Sbjct:    7 VVFVSGATGFIALHVVDDLLKTGYKVIGSGRSQ---EKNDGLLKKFKSNPNLSMEIVEDIAAPNAFDKVFQKHGKEIKVVLHIASPVHFNTTDFEKDLLIPAVNGTKSILEAIKNYAADTVEKVVITSSVAALASPGDMKDTSFVVNEESWNKDTWESCQANAVSAYCGSKKFAEKTAWDFLEENQSSIKFTLSTINPGFVFGPQL 209          
The following BLAST results are available for this feature:
BLAST of FC931092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
DFRA_MEDSA1.214e-4045.26Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]
DFRA_MAIZE2.704e-4043.19Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_SOLLC6.659e-3944.28Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
BAN_ARATH1.256e-3743.52Leucoanthocyanidin reductase OS=Arabidopsis thalia... [more]
YKJ7_SCHPO8.443e-2636.41Putative uncharacterized oxidoreductase C513.07 OS... [more]
ALD2_SPOSA1.822e-2034.13Aldehyde reductase 2 OS=Sporobolomyces salmonicolo... [more]
YD541_YEAST6.923e-2035.12Putative uncharacterized oxidoreductase YDR541C OS... [more]
GRE2_YEAST1.885e-1734.84NADPH-dependent methylglyoxal reductase GRE2 OS=Sa... [more]
YGP7_YEAST2.722e-1632.57Putative uncharacterized oxidoreductase YGL157W OS... [more]
YGD9_YEAST3.931e-1533.98Putative uncharacterized oxidoreductase YGL039W OS... [more]

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Properties
Property NameValue
Genbank descriptionC34101D01EF PostHarvP1 Citrus clementina cDNA clone C34101D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931092 ID=FC931092; Name=FC931092; organism=Citrus clementina; type=EST; length=668bp
GATTGCGAGAATCATTCGTTGACAATGAGCAGTGTAGCAGCAGCAGCGGG
GAAGGTCGTATGCGTGACCGGAGCATCGGGTTACATAGCTTCATGGCTTG
TCAAGCTTCTTCTTTCTCGTGGCTACACTGTCAAGGCCTCTGTTCGTGAT
CCCAATGATCCAAAAAAGACAAGACACTTACTTGCACTTGATGGAGCTTC
GGAAAGACTTCAGTTGTTTAAGGCAAATCTTTTGGAAGAAGGATCCTTTG
ATTCAATTGTTGATGGGTGCGATGGTGTTTGCCATACTGCATCTCCCTTT
TACCATGATGCCAAGGATCCGCAGGTGGAGTTACTTGATCCTGCTGTGAA
AGGAACTCTTAATGTTCTTAACTCATGTGCGAAGTTCCCTTCTATCAAAC
GAGTGGTTTTAACATCTTCAATGGCTGCAGTTTTAAACACTGGAAAACCT
CGAACCCCTGATGTGGTAGTTGATGAGACTTGGTTCTCGGATCCGGAGGT
TTGCAAGCAATCAGAGCTCTGGTATCCACTTTCAAAGGCATTGGCTGAGG
ATGCAGCTTGGAAATTTGCAAAGGAGAAGAGTATTGACTTGGTTACCATT
AACCCGGCAATGGTTATTGGTCCTCTCTTACAGCCAACACTTAACACAAG
TGCTGNCTGCAGTTCTAG
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