FC931093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX20_ORYSI (Homeobox-leucine zipper protein HOX20 OS=Oryza sativa subsp. indica GN=HOX20 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.780e-23 Identity = 54/131 (41.22%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPR-------REDQSPSERQCCGQVEGVNSMESELDN 619 S EQ+R+LE FE E +LEP +K +LA++LGLQPRQVA+WFQN+RARWK+KQLERDY L+ +++ L + +AL+++K AL+ ++++ L ++ +E++ P+ G SE D+ Sbjct: 48 SVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKELKGKLGDEDAAASFSSVKEEEDPAASDADPPATGAPQGSSESDS 178
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.288e-22 Identity = 51/135 (37.78%), Postives = 81/135 (60.00%), Query Frame = 2 Query: 146 GGEYSPAAEPYSCMNEIXXXXXXXXXXXXXXXXFSDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKPRREDQ 550 G E+ E Y E S Q+++LE FE E +LEP +K++LA+ELGLQPRQVA+WFQN+RARWK+KQLE+DY +L+ +++L F++L+++ ++L+ ++ K L E++ Sbjct: 33 GREFQSMLEGYEEEEEAIVEERGHVGLSEKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEE 167
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.747e-22 Identity = 46/94 (48.94%), Postives = 72/94 (76.60%), Query Frame = 2 Query: 254 EQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNKP 535 EQ+R+LE F+ + +L+P +K ++A++LGLQPRQVA+WFQN+RARWK+KQLERD+ L+A + L + +AL+++K AL ++++ E L KP Sbjct: 79 EQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRARHDALRADCDALRRDKDALAAEIRELREKLPTKP 172
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSJ (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. japonica GN=HOX4 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 47/87 (54.02%), Postives = 71/87 (81.61%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQK 508 S EQ+R+LE FE E +LEP +K +LA++LGLQPRQVA+WFQN+RARWK+KQLERDY L+ ++++L +AL+++K AL+ ++++ Sbjct: 56 SVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKE 142
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX4_ORYSI (Homeobox-leucine zipper protein HOX4 OS=Oryza sativa subsp. indica GN=HOX4 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 47/87 (54.02%), Postives = 71/87 (81.61%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQK 508 S EQ+R+LE FE E +LEP +K +LA++LGLQPRQVA+WFQN+RARWK+KQLERDY L+ ++++L +AL+++K AL+ ++++ Sbjct: 56 SVEQVRALERSFEVENKLEPERKARLARDLGLQPRQVAVWFQNRRARWKTKQLERDYAALRHSYDSLRLDHDALRRDKDALLAEIKE 142
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.893e-22 Identity = 46/85 (54.12%), Postives = 71/85 (83.53%), Query Frame = 2 Query: 254 EQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQK 508 EQ+++LE FE + +LEP +K++LA+ELGLQPRQVAIWFQN+RARWK+KQLERDY +L++NF+ L ++L+++ +L+ Q+++ Sbjct: 79 EQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKE 163
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: ATB16_ARATH (Homeobox-leucine zipper protein ATHB-16 OS=Arabidopsis thaliana GN=ATHB-16 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.347e-22 Identity = 43/85 (50.59%), Postives = 69/85 (81.18%), Query Frame = 2 Query: 254 EQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQK 508 +Q+++LE FE E +LEP +K +LA+ELGLQPRQVA+WFQN+RARWK+KQLE+DY +L+ +++L F++L+++ +L+ ++ K Sbjct: 66 DQVKALEKNFELENKLEPERKTKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFDSLRRDNDSLLQEISK 150
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.090e-21 Identity = 47/95 (49.47%), Postives = 73/95 (76.84%), Query Frame = 2 Query: 254 EQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNN-LASRFEALKKEKQALVIQLQKTNELLQNKP 535 EQ+R+LE F+ + +L+P +K ++A++LGLQPRQVA+WFQN+RARWK+KQLERD+ L+A N+ L + +AL+++K AL ++++ E L KP Sbjct: 79 EQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLERDFAALRAQHNDALRADCDALRRDKDALAAEIRELREKLPTKP 173
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSJ (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. japonica GN=HOX16 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21 Identity = 49/93 (52.69%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 254 EQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNK 532 EQ+ LE FE E +LEP +K +LA++LGLQPRQVA+WFQN+RARWK+KQLERD++ L+A+F+ L + +AL ++ L Q+ E LQ K Sbjct: 84 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEK 176
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX16_ORYSI (Homeobox-leucine zipper protein HOX16 OS=Oryza sativa subsp. indica GN=HOX16 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21 Identity = 49/93 (52.69%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 254 EQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQNK 532 EQ+ LE FE E +LEP +K +LA++LGLQPRQVA+WFQN+RARWK+KQLERD++ L+A+F+ L + +AL ++ L Q+ E LQ K Sbjct: 86 EQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKQLERDFDRLKASFDALRADHDALLQDNHRLHSQVMSLTEKLQEK 178 The following BLAST results are available for this feature:
BLAST of FC931093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931093 ID=FC931093; Name=FC931093; organism=Citrus clementina; type=EST; length=710bpback to top |