FC931093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQ 430 SDEQ+ LEL F E +LE +K+ LA ELGL P+QVA+WFQN+RAR KSK LE +++ L+ Sbjct: 67 SDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLK 127
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.152e-13 Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQ 430 SDEQ+ LEL F E +LE +K+ LA ELGL P+QVA+WFQN+RAR KSK LE +++ L+ Sbjct: 67 SDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKSKLLEEEFSKLK 127
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSJ (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. japonica GN=HOX12 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELL 523 SDEQ R LE+ F+ E +LE +K+QLA ELGL +QVA+WFQN+RAR KSK +E + F L S +A+ + L +L K E L Sbjct: 66 SDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEE-------FAKLRSAHDAVVLQNCHLETELLKLKERL 150
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELL 523 SDEQ R LE+ F+ E +LE +K+QLA ELGL +QVA+WFQN+RAR KSK +E + F L S +A+ + L +L K E L Sbjct: 66 SDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEE-------FAKLRSAHDAVVLQNCHLETELLKLKERL 150
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: ATB52_ARATH (Homeobox-leucine zipper protein ATHB-52 OS=Arabidopsis thaliana GN=ATHB-52 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELL 523 + +Q+R LE F +LEP KLQL+ +LGL RQVA+WFQNKRAR+K++ LE + LQ+ S L+ + Q L +L++ L Sbjct: 16 TQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQL 107
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 48/129 (37.21%), Postives = 60/129 (46.51%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQN--KPRREDQSPSERQCCGQVEGVNSMESELDNGDR 628 S +Q LE F L PR+K LA++LGL+PRQV +WFQN+RAR K KQ E D L+ L L+KE Q L + L N P PS C +V N+ S DR Sbjct: 87 SKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPS----CERVSNTNNNSSAAAAADR 211
BLAST of FC931093 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 48/129 (37.21%), Postives = 60/129 (46.51%), Query Frame = 2 Query: 248 SDEQIRSLELMFENETRLEPRKKLQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVIQLQKTNELLQN--KPRREDQSPSERQCCGQVEGVNSMESELDNGDR 628 S +Q LE F L PR+K LA++LGL+PRQV +WFQN+RAR K KQ E D L+ L L+KE Q L + L N P PS C +V N+ S DR Sbjct: 87 SKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPS----CERVSNTNNNSSAAAAADR 211 The following BLAST results are available for this feature:
BLAST of FC931093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931093 ID=FC931093; Name=FC931093; organism=Citrus clementina; type=EST; length=710bpback to top |