FC931096

Overview
NameFC931096
Unique NameFC931096
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10403 contig Ccv1_Contig10403:516..1231. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: RBOHJ_ARATH (Putative respiratory burst oxidase homolog protein J OS=Arabidopsis thaliana GN=RBOHJ PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.241e-49
Identity = 86/136 (63.24%), Postives = 111/136 (81.62%), Query Frame = 1
Query:    7 RRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            +RAYFYWVTREQ SF+WFKGVM+++A  D  NVIE+HNY TS+YE GDARSALIAM+Q L HAKNGVD+VS +R+++HFA+PNWR V+  ++  H  SR+GVFYCG+P L + L+ L  +FS ++ST+F FHKENF
Sbjct:  777 QRAYFYWVTREQASFEWFKGVMDDIAVYDKTNVIEMHNYLTSMYEAGDARSALIAMVQKLQHAKNGVDIVSESRIRTHFARPNWRKVFSELSNKHETSRIGVFYCGSPTLVRPLKSLCQEFSLESSTRFTFHKENF 912          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: RBOHH_ARATH (Putative respiratory burst oxidase homolog protein H OS=Arabidopsis thaliana GN=RBOHH PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.116e-49
Identity = 85/136 (62.50%), Postives = 111/136 (81.62%), Query Frame = 1
Query:    7 RRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            +RAYF+WVTREQ SFDWFKGVM+++AE D  +VIE+HNY TS+YE GDARSALIAM+Q L HAKNGVD+VS +R+++HFA+PNWR V+  ++  H   R+GVFYCG+P L + L+ L  +FS ++ST+F FHKENF
Sbjct:  751 QRAYFFWVTREQASFDWFKGVMDDIAEYDKTHVIEMHNYLTSMYEAGDARSALIAMVQKLQHAKNGVDIVSESRIRTHFARPNWRKVFSELSSKHEACRIGVFYCGSPTLVRPLKELCQEFSLESSTRFTFHKENF 886          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: RBOHI_ARATH (Probable respiratory burst oxidase homolog protein I OS=Arabidopsis thaliana GN=RBOHI PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 8.041e-49
Identity = 83/137 (60.58%), Postives = 107/137 (78.10%), Query Frame = 1
Query:    4 TRRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            T+ AYFYWVTREQGSFDWFK +MNE+A+ D   VIE+HNY TSVYEEGD RS L+ M+Q+LNHAKNGVD+ SGT+V++HF +P W+ V  +++  H ++R+GVFYCG P+L KEL  L  +F+    T+FDFHKE F
Sbjct:  805 TKNAYFYWVTREQGSFDWFKEIMNEIADSDRKGVIEMHNYLTSVYEEGDTRSNLLTMIQTLNHAKNGVDIFSGTKVRTHFGRPKWKKVLSKISTKHRNARIGVFYCGVPSLGKELSTLCHEFNQTGITRFDFHKEQF 941          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: RBOHE_ARATH (Respiratory burst oxidase homolog protein E OS=Arabidopsis thaliana GN=RBOHE PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.340e-48
Identity = 83/135 (61.48%), Postives = 110/135 (81.48%), Query Frame = 1
Query:   10 RAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            +A+FYWVTRE GS +WF+GVM E++++D    IELHNY TSVY+EGDARS LI M+Q+LNHAK+GVD++SGTRV++HFA+PNW+ V+  +A  HP+S VGVFYCG   + KEL+  A D S KT+T+F+FHKE+F
Sbjct:  814 KAHFYWVTREPGSVEWFRGVMEEISDMDCRGQIELHNYLTSVYDEGDARSTLIKMVQALNHAKHGVDILSGTRVRTHFARPNWKEVFSSIARKHPNSTVGVFYCGIQTVAKELKKQAQDMSQKTTTRFEFHKEHF 948          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: NOXA_DICDI (Superoxide-generating NADPH oxidase heavy chain subunit A OS=Dictyostelium discoideum GN=noxA PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19
Identity = 40/135 (29.63%), Postives = 73/135 (54.07%), Query Frame = 1
Query:   10 RAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            + +FYW+ R++ SF+WF G++ E+   +HNN +E+H Y T      + R  +        +     D+++G    + F +P W  ++   AL + +  VGVF+CG   L+K L   +  ++  T+ +F ++KENF
Sbjct:  391 KVHFYWICRDRNSFEWFSGLIGELEMENHNNFLEIHPYLTGALSAQEIRDVM--------YGDEEKDLITGFTTPTQFGRPKWDEIFADHALRYAEKDVGVFFCGPKLLSKSLYKASTHYTKTTTCRFHYNKENF 517          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: NOX3_MOUSE (NADPH oxidase 3 OS=Mus musculus GN=Nox3 PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 44/141 (31.21%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   10 RAYFYWVTREQGSFDWFKGVM----NEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFS--HKTSTKFDFHKENF 414
            + YFYW+ R+ G+F+WF  ++      ++E    +++  H Y T   E      AL        H    +DV++G + K+ + +PNW + +K++A NHP S +GVF+CG+ A++K L+ +   +S        F ++KENF
Sbjct:  436 KVYFYWICRDAGAFEWFADLLLSLETRMSEQGKAHLLSYHIYLTGWDENQAIHIAL--------HWDESLDVITGLKQKAFYGRPNWNDEFKQIAYNHPSSSIGVFFCGSKAMSKTLQKMCRLYSSVDPRGVHFYYNKENF 568          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: NOX3_RAT (NADPH oxidase 3 OS=Rattus norvegicus GN=Nox3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17
Identity = 43/141 (30.50%), Postives = 75/141 (53.19%), Query Frame = 1
Query:   10 RAYFYWVTREQGSFDWFKGVM----NEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHK--TSTKFDFHKENF 414
            + YFYW+ R+  +F+WF  ++     +++E    +++  H Y T   E      AL        H    +DV++G + K+ + +PNW   +K++A NHP S +GVF+CG  A++K L+ +   +S        F ++KENF
Sbjct:  436 KVYFYWICRDAAAFEWFADLLLSLETQMSEQGKAHLLSYHIYLTGWDEYQAIHIAL--------HWDESLDVITGLKQKTFYGRPNWNEEFKQIAYNHPSSSIGVFFCGPKAMSKTLQKMCRLYSSSDPRGVHFYYNKENF 568          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: DUOX1_PIG (Dual oxidase 1 OS=Sus scrofa GN=DUOX1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 1
Query:    7 RRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSR-VGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            ++ YF WVTR Q  F+W   ++ EV E DH +++ +H Y T + E+ D R+ ++ + +          + +G R  +HF +P +   +  +   HP  R +GVF CG P +TK +       + +  T F  H ENF
Sbjct: 1417 KKIYFIWVTRTQRQFEWLADIIREVEENDHRDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1553          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: DUOX1_HUMAN (Dual oxidase 1 OS=Homo sapiens GN=DUOX1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16
Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 1
Query:    7 RRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSR-VGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            ++ YF WVTR Q  F+W   ++ EV E DH +++ +H Y T + E+ D R+ ++ + +          + +G R  +HF +P +   +  +   HP  R +GVF CG P +TK +       + +  T F  H ENF
Sbjct: 1415 KKIYFIWVTRTQRQFEWLADIIREVEENDHQDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1551          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: NOX1_RAT (NADPH oxidase 1 OS=Rattus norvegicus GN=Nox1 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16
Identity = 51/141 (36.17%), Postives = 74/141 (52.48%), Query Frame = 1
Query:    1 RTRRAYFYWVTREQGSFDWFKGVMNEVA-ELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTK--FDFHKENF 414
            +T++ YFYW+ RE G+F WF  ++N +  E+D     +  NY   +        + IA   +LN  +   DV++G + K+ F +P W N + R+A  HP S VGVF CG P L K LR     +S     K  F F+KE F
Sbjct:  428 KTQKIYFYWICRETGAFAWFNNLLNSLEQEMDELGKPDFLNYRLFL----TGWDSNIAGHAALNFDR-ATDVLTGLKQKTSFGRPMWDNEFSRIATAHPKSVVGVFLCGPPTLAKSLRKCCRRYSSLDPRKVQFYFNKETF 563          
The following BLAST results are available for this feature:
BLAST of FC931096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
RBOHJ_ARATH1.241e-4963.24Putative respiratory burst oxidase homolog protein... [more]
RBOHH_ARATH2.116e-4962.50Putative respiratory burst oxidase homolog protein... [more]
RBOHI_ARATH8.041e-4960.58Probable respiratory burst oxidase homolog protein... [more]
RBOHE_ARATH2.340e-4861.48Respiratory burst oxidase homolog protein E OS=Ara... [more]
NOXA_DICDI5.084e-1929.63Superoxide-generating NADPH oxidase heavy chain su... [more]
NOX3_MOUSE9.587e-1831.21NADPH oxidase 3 OS=Mus musculus GN=Nox3 PE=1 SV=2[more]
NOX3_RAT8.116e-1730.50NADPH oxidase 3 OS=Rattus norvegicus GN=Nox3 PE=2 ... [more]
DUOX1_PIG1.384e-1630.66Dual oxidase 1 OS=Sus scrofa GN=DUOX1 PE=2 SV=1[more]
DUOX1_HUMAN1.384e-1630.66Dual oxidase 1 OS=Homo sapiens GN=DUOX1 PE=1 SV=1[more]
NOX1_RAT1.808e-1636.17NADPH oxidase 1 OS=Rattus norvegicus GN=Nox1 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionC34101D05EF PostHarvP1 Citrus clementina cDNA clone C34101D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931096 ID=FC931096; Name=FC931096; organism=Citrus clementina; type=EST; length=715bp
AGGACAAGAAGAGCATACTTCTATTGGGTTACAAGAGAGCAAGGCTCGTT
CGATTGGTTTAAGGGAGTGATGAATGAGGTGGCTGAATTGGACCACAACA
ATGTCATAGAGCTTCACAATTACTGCACCAGTGTTTATGAAGAAGGTGAT
GCTCGCTCAGCTCTCATTGCCATGCTTCAGTCCCTCAATCACGCCAAGAA
TGGCGTTGACGTTGTCTCTGGAACACGCGTTAAGTCACATTTCGCCAAGC
CTAATTGGCGCAATGTGTACAAACGCGTTGCTCTCAATCACCCTGATTCT
AGAGTTGGTGTTTTCTATTGCGGGGCACCGGCACTGACAAAAGAGCTACG
ACACCTAGCTTTGGATTTCTCTCACAAGACAAGCACCAAGTTTGATTTCC
ATAAAGAAAACTTCTAGATCAAGTCCCTCCTGATTTCCACCATTATATAT
CATCTCTTCCACTCCGTTTTCTCGTACAAAGCCTGTGGCATGGCCCACTG
GCCCTTATGTTTATAGAAAAATCATATCAATATTTGTTTGGTACCCAGTT
GATTTTGCTGCAAAATCACTAATAGAGAGCATTAGAAATATCAAGCGGAC
AAAGGTTGGTGGGTAGTTGATATCAAGGCCACACCACACTGGACACACAA
CACATGGCAAGGGAGATATAGGCCGAAAAAGGGGTTTAGCAAAAAGTCAT
GCTCAGCCATTTCCT
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