FC931096

Overview
NameFC931096
Unique NameFC931096
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10403 contig Ccv1_Contig10403:516..1231. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: DUOX2_PIG (Dual oxidase 2 OS=Sus scrofa GN=DUOX2 PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.361e-16
Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 1
Query:    7 RRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSR-VGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            ++ YF WVTR Q  F+W   ++ EV E DH +++ +H Y T + E+ D R+ ++ + +          + +G R  +HF +P +   +  +   HP  R +GVF CG P +TK +       + +  T F  H ENF
Sbjct: 1409 KKIYFIWVTRTQRQFEWLADIIREVEENDHRDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKTCQLINRQDQTHFVHHYENF 1545          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: DUOX1_CANFA (Dual oxidase 1 OS=Canis familiaris GN=DUOX1 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16
Identity = 42/137 (30.66%), Postives = 70/137 (51.09%), Query Frame = 1
Query:    7 RRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSR-VGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            ++ YF WVTR Q  F+W   ++ EV E D  +++ +H Y T + E+ D R+ ++ + +          + +G R  +HF +P +   +K +   HP  R +GVF CG P +TK +       + +  T F  H ENF
Sbjct: 1415 KKIYFIWVTRTQRQFEWLADIIREVEENDCQDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFKSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINRQDRTHFSHHYENF 1551          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: NOX3_HUMAN (NADPH oxidase 3 OS=Homo sapiens GN=NOX3 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16
Identity = 42/141 (29.79%), Postives = 73/141 (51.77%), Query Frame = 1
Query:   10 RAYFYWVTREQGSFDWFKGVM----NEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFS--HKTSTKFDFHKENF 414
            + YFYW+ R+  +F+WF  ++      ++E    + +  H + T   E      AL        H     DV++G + K+ + +PNW N +K++A NHP S +GVF+CG  AL++ L+ +   +S        F ++KE+F
Sbjct:  436 KVYFYWICRDARAFEWFADLLLSLETRMSEQGKTHFLSYHIFLTGWDENQALHIAL--------HWDENTDVITGLKQKTFYGRPNWNNEFKQIAYNHPSSSIGVFFCGPKALSRTLQKMCHLYSSADPRGVHFYYNKESF 568          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: DUOX2_HUMAN (Dual oxidase 2 OS=Homo sapiens GN=DUOX2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 41/137 (29.93%), Postives = 69/137 (50.36%), Query Frame = 1
Query:    7 RRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSR-VGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            ++ YF WVTR Q  F+W   ++ EV E DH +++ +H Y T + E+ D R+ ++ + +          + +G R  +HF +P +   +  +   HP  R +GVF CG P +TK +       + +    F  H ENF
Sbjct: 1412 KKIYFIWVTRTQRQFEWLADIIQEVEENDHQDLVSVHIYVTQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSITHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLVNRQDRAHFMHHYENF 1548          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: DUOX1_RAT (Dual oxidase 1 OS=Rattus norvegicus GN=Duox1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 41/137 (29.93%), Postives = 69/137 (50.36%), Query Frame = 1
Query:    7 RRAYFYWVTREQGSFDWFKGVMNEVAELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSR-VGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 414
            ++ YF WVTR Q  F+W   ++ EV E D  +++ +H Y T + E+ D R+ ++ + +          + +G R  +HF +P +   +  +   HP  R +GVF CG P +TK +       + +  T F  H ENF
Sbjct: 1415 KKIYFIWVTRTQRQFEWLADIIREVEENDSRDLVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNRSLFTGLRSVTHFGRPPFEPFFNSLQEVHPQVRKIGVFSCGPPGMTKNVEKACQLINKQDRTHFSHHYENF 1551          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: NOX1_MOUSE (NADPH oxidase 1 OS=Mus musculus GN=Nox1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15
Identity = 48/141 (34.04%), Postives = 74/141 (52.48%), Query Frame = 1
Query:    1 RTRRAYFYWVTREQGSFDWFKGVMNEVA-ELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTK--FDFHKENF 414
            +T++ YFYW+ RE G+F WF  ++N +  E++    ++  NY   +        + IA   +LN  +   D+++G + K+ F +P W N + R+A  HP S VGVF CG   L K LR     +S     K  F F+KE F
Sbjct:  456 KTQKIYFYWICRETGAFAWFNNLLNSLEQEMEELGKMDFLNYRLFL----TGWDSNIAGHAALNFDR-ATDILTGLKQKTSFGRPMWDNEFSRIATAHPKSAVGVFLCGPRTLAKSLRKRCQRYSSLDPRKVQFYFNKETF 591          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: NOX1_HUMAN (NADPH oxidase 1 OS=Homo sapiens GN=NOX1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 1
Query:    1 RTRRAYFYWVTREQGSFDWFKGVMNEVA-ELDHNNVIELHNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTK--FDFHKENF 414
            +T++ YFYW+ RE G+F WF  ++  +  E++    +   NY   +        + I    +LN  K   D+V+G + K+ F +P W N +  +A +HP S VGVF CG   L K LR     +S     K  F F+KENF
Sbjct:  429 KTKKIYFYWICRETGAFSWFNNLLTSLEQEMEELGKVGFLNYRLFL----TGWDSNIVGHAALNFDK-ATDIVTGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPRKVQFYFNKENF 564          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: CY24B_BOVIN (Cytochrome b-245 heavy chain OS=Bos taurus GN=CYBB PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 45/143 (31.47%), Postives = 72/143 (50.35%), Query Frame = 1
Query:    1 RTRRAYFYWVTREQGSFDWFKGVMN--EVAELDHNNVIEL-HNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHK--TSTKFDFHKENF 414
            R ++ YFYW+ R+  +F+WF  ++   E    + NN   L +N C + ++E  A    +       H     DV++G + K+ + +PNW N +K +   HP++R+GVF CG  AL   L    +  S        F F+KENF
Sbjct:  435 RLKKIYFYWLCRDTHAFEWFADLLQLLETQMQEKNNTDFLSYNICLTGWDESQASHFAM-------HHDEEKDVITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVHFIFNKENF 570          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: CY24B_BISBI (Cytochrome b-245 heavy chain OS=Bison bison GN=CYBB PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15
Identity = 45/143 (31.47%), Postives = 72/143 (50.35%), Query Frame = 1
Query:    1 RTRRAYFYWVTREQGSFDWFKGVMN--EVAELDHNNVIEL-HNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHK--TSTKFDFHKENF 414
            R ++ YFYW+ R+  +F+WF  ++   E    + NN   L +N C + ++E  A    +       H     DV++G + K+ + +PNW N +K +   HP++R+GVF CG  AL   L    +  S        F F+KENF
Sbjct:  435 RLKKIYFYWLCRDTHAFEWFADLLQLLETQMQEKNNTDFLSYNICLTGWDESQASHFAM-------HHDEEKDVITGLKQKTLYGRPNWDNEFKTIGSQHPNTRIGVFLCGPEALADTLNKQCISNSDSGPRGVHFIFNKENF 570          
BLAST of FC931096 vs. ExPASy Swiss-Prot
Match: CY24B_PIG (Cytochrome b-245 heavy chain (Fragment) OS=Sus scrofa GN=CYBB PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.596e-15
Identity = 45/143 (31.47%), Postives = 73/143 (51.05%), Query Frame = 1
Query:    1 RTRRAYFYWVTREQGSFDWFKGVMN--EVAELDHNNVIEL-HNYCTSVYEEGDARSALIAMLQSLNHAKNGVDVVSGTRVKSHFAKPNWRNVYKRVALNHPDSRVGVFYCGAPALTKELRHLALDFSHKT--STKFDFHKENF 414
            R ++ YFYW+ R+  +F+WF  ++   E    + NN   L +N   + ++E  A    +       H     DV++G + K+ + +PNW N +K +A  HP +R+GVF CG  AL + L    +  S  +     F F+KENF
Sbjct:  349 RLKKIYFYWLCRDTHAFEWFADLLQLLETQMQERNNAGFLSYNIYLTGWDESQANHFAV-------HHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPTTRIGVFLCGPEALAETLNKQCISNSDSSPRGVHFIFNKENF 484          
The following BLAST results are available for this feature:
BLAST of FC931096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
DUOX2_PIG2.361e-1630.66Dual oxidase 2 OS=Sus scrofa GN=DUOX2 PE=1 SV=2[more]
DUOX1_CANFA6.871e-1630.66Dual oxidase 1 OS=Canis familiaris GN=DUOX1 PE=1 S... [more]
NOX3_HUMAN8.973e-1629.79NADPH oxidase 3 OS=Homo sapiens GN=NOX3 PE=1 SV=1[more]
DUOX2_HUMAN1.531e-1529.93Dual oxidase 2 OS=Homo sapiens GN=DUOX2 PE=1 SV=1[more]
DUOX1_RAT1.531e-1529.93Dual oxidase 1 OS=Rattus norvegicus GN=Duox1 PE=1 ... [more]
NOX1_MOUSE1.999e-1534.04NADPH oxidase 1 OS=Mus musculus GN=Nox1 PE=1 SV=2[more]
NOX1_HUMAN3.410e-1534.04NADPH oxidase 1 OS=Homo sapiens GN=NOX1 PE=1 SV=2[more]
CY24B_BOVIN4.453e-1531.47Cytochrome b-245 heavy chain OS=Bos taurus GN=CYBB... [more]
CY24B_BISBI4.453e-1531.47Cytochrome b-245 heavy chain OS=Bison bison GN=CYB... [more]
CY24B_PIG7.596e-1531.47Cytochrome b-245 heavy chain (Fragment) OS=Sus scr... [more]

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Properties
Property NameValue
Genbank descriptionC34101D05EF PostHarvP1 Citrus clementina cDNA clone C34101D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931096 ID=FC931096; Name=FC931096; organism=Citrus clementina; type=EST; length=715bp
AGGACAAGAAGAGCATACTTCTATTGGGTTACAAGAGAGCAAGGCTCGTT
CGATTGGTTTAAGGGAGTGATGAATGAGGTGGCTGAATTGGACCACAACA
ATGTCATAGAGCTTCACAATTACTGCACCAGTGTTTATGAAGAAGGTGAT
GCTCGCTCAGCTCTCATTGCCATGCTTCAGTCCCTCAATCACGCCAAGAA
TGGCGTTGACGTTGTCTCTGGAACACGCGTTAAGTCACATTTCGCCAAGC
CTAATTGGCGCAATGTGTACAAACGCGTTGCTCTCAATCACCCTGATTCT
AGAGTTGGTGTTTTCTATTGCGGGGCACCGGCACTGACAAAAGAGCTACG
ACACCTAGCTTTGGATTTCTCTCACAAGACAAGCACCAAGTTTGATTTCC
ATAAAGAAAACTTCTAGATCAAGTCCCTCCTGATTTCCACCATTATATAT
CATCTCTTCCACTCCGTTTTCTCGTACAAAGCCTGTGGCATGGCCCACTG
GCCCTTATGTTTATAGAAAAATCATATCAATATTTGTTTGGTACCCAGTT
GATTTTGCTGCAAAATCACTAATAGAGAGCATTAGAAATATCAAGCGGAC
AAAGGTTGGTGGGTAGTTGATATCAAGGCCACACCACACTGGACACACAA
CACATGGCAAGGGAGATATAGGCCGAAAAAGGGGTTTAGCAAAAAGTCAT
GCTCAGCCATTTCCT
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