FC931098

Overview
NameFC931098
Unique NameFC931098
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931098 vs. ExPASy Swiss-Prot
Match: ALF_MYCBO (Fructose-bisphosphate aldolase OS=Mycobacterium bovis GN=fba PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.513e-18
Identity = 68/189 (35.98%), Postives = 86/189 (45.50%), Query Frame = 1
Query:  115 AKQNGFAIPAINVTSSSTVVASLEAARDQKCPVILQVSQGGAAFFAGKGVSNEGQKXXXXXXXXXXHYIRSVATAYDIPVILHTDHCAK-KLLPWLDGMLDADEAYFKLHNEPLFSSHMIDLSEESFDYNINTTAAYFKRAAPMKQWLEMEIGITXXXXXXXXXXXXXXXSLYTQPEDILVIQKTLAAI 678
            AKQN +A PAIN TSS TV A+++   D     I+Q S GGA F +G GV     K           +   +A  Y + V LHTDHC K KL  ++  +L            PLF SHM D S    D N+       K AA  K  LE+EIG+                 LYT PED    +KT+ A+
Sbjct:   16 AKQNSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGV-----KDMVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPLLAISAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVV--GGEEDGVANEINEKLYTSPED---FEKTIEAL 194          
BLAST of FC931098 vs. ExPASy Swiss-Prot
Match: ALF_MYCLE (Fructose-bisphosphate aldolase OS=Mycobacterium leprae GN=fba PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.629e-17
Identity = 67/189 (35.45%), Postives = 88/189 (46.56%), Query Frame = 1
Query:  115 AKQNGFAIPAINVTSSSTVVASLEAARDQKCPVILQVSQGGAAFFAGKGVSNEGQKXXXXXXXXXXHYIRSVATAYDIPVILHTDHCAK-KLLPWLDGMLDADEAYFKLHNEPLFSSHMIDLSEESFDYNINTTAAYFKRAAPMKQWLEMEIGITXXXXXXXXXXXXXXXSLYTQPEDILVIQKTLAAI 678
            AK+N +A PAIN TSS TV A+++   D     I+Q S GGA F +G GV     K           +  ++A  Y I V LHTDHC K KL  ++  +L           +PLF SHM D S    D N+       K AA  K  LE+EIG+                 LYT P+D +   KT+ A+
Sbjct:   16 AKENSYAFPAINCTSSETVNAAIKGFADAGSDGIIQFSTGGAEFASGLGV-----KDMVTGAVALAKFTHTIAAKYPINVALHTDHCPKDKLDSYVRPLLAISARRVATGKDPLFGSHMWDGSAIPIDENLAIAQDLLKDAAAAKIILEVEIGVV--GGEEDGVAGEINEKLYTTPKDFV---KTIDAL 194          
BLAST of FC931098 vs. ExPASy Swiss-Prot
Match: ALF_CORGL (Fructose-bisphosphate aldolase OS=Corynebacterium glutamicum GN=fba PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17
Identity = 64/193 (33.16%), Postives = 90/193 (46.63%), Query Frame = 1
Query:  103 LFEYAKQNGFAIPAINVTSSSTVVASLEAARDQKCPVILQVSQGGAAFFAGKGVSNEGQKXXXXXXXXXXHYIRSVATAYDIPVILHTDHCAKKLL-PWLDGMLDADEAYFKLHNEPLFSSHMIDLSEESFDYNINTTAAYFKRAAPMKQWLEMEIGITXXXXXXXXXXXXXXXSLYTQPEDILVIQKTLAAI 678
            + + AK+ GFA PAIN TSS T+ A+L+   + +   I+Q S GGA F +G  V N+              +    A +Y I V LHTDHC K++L  ++  +L   +        PLF SHM D S    D N+        +A      LE+EIG+                +LYT PED    +KT+ AI
Sbjct:   12 MLDRAKEGGFAFPAINCTSSETINAALKGFAEAESDGIIQFSTGGAEFGSGLAVKNK-----VKGAVALAAFAHEAAKSYGINVALHTDHCQKEVLDEYVRPLLAISQERVDRGELPLFQSHMWDGSAVPIDENLEIAQELLAKAKAANIILEVEIGVV--GGEEDGVEAKAGANLYTSPED---FEKTIDAI 194          
BLAST of FC931098 vs. ExPASy Swiss-Prot
Match: ALF_STRCO (Fructose-bisphosphate aldolase OS=Streptomyces coelicolor GN=fba PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.072e-16
Identity = 62/182 (34.07%), Postives = 83/182 (45.60%), Query Frame = 1
Query:  103 LFEYAKQNGFAIPAINVTSSSTVVASLEAARDQKCPVILQVSQGGAAFFAGKGVSNEGQKXXXXXXXXXXHYIRSVATAYDIPVILHTDHCAK-KLLPWLDGMLDADEAYFKLHNEPLFSSHMIDLSEESFDYNINTTAAYFKRAAPMKQWLEMEIGITXXXXXXXXXXXXXXXSLYTQPED 645
            + + AK   FA PAINVTSS T+ A+L    + +   I+Q+S GGA F  G     +  K           +   VA  YD+ V LHTDHC K KL  ++  ++   E   K    PLF SHM D S E+   N++       RA   +  LE+E  IT               SLYT  +D
Sbjct:   12 MLDRAKAGKFAYPAINVTSSQTLHAALRGFAEAESDGIVQISTGGAEFLGG-----QHNKDMVTGAVALAEFAHIVAEKYDVTVALHTDHCPKDKLDGYVRPLIAVSEERVKAGRNPLFQSHMWDGSAETLADNLSIAQELLARARAARIILEVE--ITPTGGEEDGVSHEINDSLYTTVDD 186          
BLAST of FC931098 vs. ExPASy Swiss-Prot
Match: ALF_STRGB (Fructose-bisphosphate aldolase OS=Streptomyces galbus GN=fba PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.578e-12
Identity = 57/184 (30.98%), Postives = 81/184 (44.02%), Query Frame = 1
Query:  103 LFEYAKQNGFAIPAINVTSSSTVVASLEAARDQKCPVILQVSQGGAAFFAGKGVSNEGQKXXXXXXXXXXHYIRSVATAYDIPVILHTDHCAK-KLLPWLDGMLDADEAYFKLHNEPLFSSHMIDLSEESFDYNINTTAAYFKRAAPMKQWLEMEIGITXXXXXXXXXXXXXXXSLYTQPEDIL 651
            + + AK   FA PAINVTSS T+ A+L    + +   I+Q+S GGA F  G     +  K           +   +A  Y + + LHTDHC K KL  ++  +L   +   +    PLF SHM D S E    N+       + A   +  LE+E  IT               SLYT  +D +
Sbjct:   12 MLDRAKAGKFAYPAINVTSSQTLNAALRGFAEAESDGIVQISTGGAEFLGG-----QYSKDMVTGAVALAEFAHIIAEKYPVNIALHTDHCPKDKLDGYVRPLLALSKKRVEAGLGPLFQSHMWDGSAEPLADNLAIAQELLETARAAQIILEVE--ITPTGGEEDGVSHEINDSLYTTVDDAI 188          
The following BLAST results are available for this feature:
BLAST of FC931098 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ALF_MYCBO2.513e-1835.98Fructose-bisphosphate aldolase OS=Mycobacterium bo... [more]
ALF_MYCLE1.629e-1735.45Fructose-bisphosphate aldolase OS=Mycobacterium le... [more]
ALF_CORGL3.629e-1733.16Fructose-bisphosphate aldolase OS=Corynebacterium ... [more]
ALF_STRCO3.072e-1634.07Fructose-bisphosphate aldolase OS=Streptomyces coe... [more]
ALF_STRGB1.578e-1230.98Fructose-bisphosphate aldolase OS=Streptomyces gal... [more]

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Properties
Property NameValue
Genbank descriptionC34101D08EF PostHarvP1 Citrus clementina cDNA clone C34101D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931098 ID=FC931098; Name=FC931098; organism=Citrus clementina; type=EST; length=710bp
GAGATTTCTAATCAAAATCTTTTTTATACAATTGTCACAATGGGTGTCCT
TGAGCAACTTAACCGCAAGTCCGGCGTCATTGTTGGTGACGATGTTCTCC
GTCTTTTCGAGTACGCTAAGCAGAATGGTTTTGCCATCCCCGCCATTAAC
GTCACCTCCTCTTCCACTGTTGTTGCATCTCTCGAGGCTGCTCGGGACCA
GAAATGTCCCGTTATCCTGCAGGTCTCCCAGGGTGGTGCCGCTTTCTTCG
CGGGTAAGGGTGTGAGCAACGAGGGCCAGAAGGCCTCCATTGCTGGTGCC
ATTGCCGCGGCCCACTACATCCGTAGCGTGGCCACCGCCTACGATATCCC
CGTCATCCTTCACACCGATCACTGCGCCAAGAAGCTCCTCCCTTGGCTCG
ATGGCATGCTCGATGCCGATGAGGCTTACTTCAAGCTGCACAACGAGCCC
CTCTTCTCCTCCCACATGATTGATCTGTCTGAGGAGTCCTTTGACTACAA
CATCAACACCACCGCCGCCTACTTCAAGCGCGCTGCTCCCATGAAGCAGT
GGCTCGAGATGGAGATTGGTATCACCGGTGGTGAGGAGGATGGTGTCAAC
AACGAGGATGTTGACAACAACTCCCTCTACACCCAGCCCGAGGACATCCT
GGTCATCCAGAAGACCCTCGCTGCCATCAGCCCCTACTTCTCCCATTGCG
CTGGCTTTGG
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