FC931104

Overview
NameFC931104
Unique NameFC931104
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.228e-52
Identity = 101/229 (44.10%), Postives = 145/229 (63.32%), Query Frame = 1
Query:   25 NKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRW-DVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLNPIGE 708
            N Y G+L F+++  MFNG+AE++MT+ RLPVFYKQRD LF+P W + LP ++L IP+SI +ST W+V+TYY+IG+AP A RFFKQ+L  F I  MA  ++RFIA+  RT  I N  G                + +I  +  W Y++SP+ Y   +I V+E    RW +  SG+ +     LG ++L     ++D  WYWIG+G L+GF+ +FN  F  ALTYL+P+G+
Sbjct:  572 NIYVGSLLFAMIVNMFNGLAEMAMTIQRLPVFYKQRDLLFHPPWTYTLPTFLLGIPISIFESTAWMVVTYYSIGYAPDAERFFKQFLIIFLIQQMAAGIFRFIASTCRTMTIANTGGVLVLLVVFLTGGFLLPRSEIPVWWRWAYWISPLSYAFNAITVNELFAPRWMNKMSGNSTTR---LGTSVLNIWDVFDDKNWYWIGVGGLLGFTVIFNGFFTLALTYLDPLGK 797          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.572e-52
Identity = 103/235 (43.83%), Postives = 143/235 (60.85%), Query Frame = 1
Query:   22 GNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRW-DVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLNPIGEFNSTV 723
            G  Y GAL FS++  MFNG AEL++ + RLPVFYKQRD LF+P W F+LP ++L IP+SI +S +W+ +TYY IGFAP  SRF K  L  F    MA  ++RFIAA  R+ ++ N  G                + +I  + +W Y+VSPM Y   ++ V+E L  RW + PS D   N  +LG A+L+    + D  WYWIG+G ++GF+ LFN L   ALT+LNP+ +  + V
Sbjct:  549 GAVYIGALMFSMIVNMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFSLPTFLLGIPISIFESVVWVTITYYMIGFAPELSRFLKHLLVIFLTQQMAGGIFRFIAATCRSMILANTGGALVILLLFLLGGFIVPRGEIPKWWKWAYWVSPMAYTYDALTVNEMLAPRWINQPSSD---NSTSLGLAVLEIFDIFTDPNWYWIGVGGILGFTVLFNILVTLALTFLNPLEKQQAVV 780          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.666e-52
Identity = 105/236 (44.49%), Postives = 138/236 (58.47%), Query Frame = 1
Query:   10 DLEGGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRW---DVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLNPIGE 708
            D + G  Y GAL F ++  MF+G A+LS+T+ RLPVFYK RD LFY  W FALP  ++RIP S+ +S IW+ +TYYT+GFAP ASRFFK  L  F +  MA  L+R  A + RT V+TN  G+               KD I  +  W Y+ SP+ Y   +   +E    RW    VP G R      LG A+L+  G + +  WYWI  GAL+GF+ LFN LF  +L YLNP+G+
Sbjct:  592 DEDDGQIYIGALIFVMITNMFSGFADLSLTLARLPVFYKHRDFLFYRPWTFALPNVLVRIPSSLFESIIWVAITYYTMGFAPEASRFFKHLLVVFMLQQMAAGLFRVTAGLCRTVVVTNTAGSLAVLIMFVLGGFILPKDAIPKWWVWAYWCSPLTYAYIAFSSNEMHSPRWMDKFVPDGKR------LGVAVLENSGVFTNKEWYWIATGALLGFTILFNVLFSLSLMYLNPVGK 821          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.960e-50
Identity = 97/234 (41.45%), Postives = 144/234 (61.54%), Query Frame = 1
Query:   10 DLEGGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRWD--VPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLNPIG 705
            DL   N Y GALF++L+ ++ +G  ELSMT+ RL VFYKQ +  FYPAWA+ +P  +L+IPLS+L+S IW  +TYY IGF+P A RFF+Q L  F +H  ++ ++RF+A++ RT V + A G                +  +  +L+WG+++SP+ YG+  + V+EFL  RW   +P+        ++G  +L+ RG   D Y+YWI + AL GF+ LFN  F  ALT+L   G
Sbjct:  569 DLVHANYYLGALFYALIILLVDGFPELSMTITRLAVFYKQSELCFYPAWAYTIPATILKIPLSLLESVIWASMTYYVIGFSPEAGRFFRQLLLLFAVHMTSISMFRFLASVCRTIVASTAAGGLSILFVLCFSGFIIPRPSMPIWLKWGFWISPLTYGEIGLAVNEFLAPRWQKTLPT------NTSIGNEVLESRGLNFDGYFYWISVCALFGFTILFNIGFTLALTFLKAPG 796          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.659e-49
Identity = 93/228 (40.79%), Postives = 140/228 (61.40%), Query Frame = 1
Query:   10 DLEGGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRWDVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYL 693
            D+  GN Y  ALFF+L+ ++ +G  ELSMT  RL VFYKQ+   FYPAWA+A+P  VL++PLS  +S +W  L+YY IG+ P ASRFFKQ++  F +H  ++ ++R +AAI +T V +   G+                  +  +L+WG++ +P+ YG+  + V+EFL  RW+        N  TLG+ +L+ RG   + Y YW+ + AL+GF+ LFN +F  ALT+L
Sbjct:  571 DIIHGNSYMSALFFALIILLVDGFPELSMTAQRLAVFYKQKQLCFYPAWAYAIPATVLKVPLSFFESLVWTCLSYYVIGYTPEASRFFKQFILLFAVHFTSISMFRCLAAIFQTVVASITAGSFGILFTFVFAGFVIPPPSMPAWLKWGFWANPLSYGEIGLSVNEFLAPRWN----QMQPNNFTLGRTILQTRGMDYNGYMYWVSLCALLGFTVLFNIIFTLALTFL 794          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB33G_ARATH (ABC transporter G family member 33 OS=Arabidopsis thaliana GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 7.708e-47
Identity = 90/228 (39.47%), Postives = 135/228 (59.21%), Query Frame = 1
Query:   10 DLEGGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRWDVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYL 693
            D+  GN Y   LFF+ + ++ +G+ ELSMTV RL VFYKQ+   FYPAWA+A+P  VL+IPLS  +S +W  LTYY IG+ P   RFF+Q++  F +H  ++ ++R IAAI +T V     G+                 D+  +L+WG++V+P+ Y +  + V+EFL  RW            TLG+ +L+ RG   D Y YW+ + AL+G + +FN +F  AL++L
Sbjct:  536 DIIHGNSYMSCLFFATVVLLVDGIPELSMTVQRLSVFYKQKQLCFYPAWAYAIPATVLKIPLSFFESLVWTCLTYYVIGYTPEPYRFFRQFMILFAVHFTSISMFRCIAAIFQTGVAAMTAGSFVMLITFVFAGFAIPYTDMPGWLKWGFWVNPISYAEIGLSVNEFLAPRWQ----KMQPTNVTLGRTILESRGLNYDDYMYWVSLSALLGLTIIFNTIFTLALSFL 759          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 9.423e-45
Identity = 88/231 (38.10%), Postives = 135/231 (58.44%), Query Frame = 1
Query:    1 SVGDLEGGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRWDVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYL 693
            S  D    N   G+LFFSL  ++ +G+ EL++T+ R+ VF KQ++  FYPAWA+A+P  +L+IP+S L+S +W +LTYY IG++P   RF +Q+L  F +H   + ++R IAA+ R  V+   +G+               K  +  +LEWG+++SP+ Y +  +  +EF   RW    G  +   RTLG+ +L  RG    +  YW   GALIGF+  FN +F  ALT+L
Sbjct:  534 STRDSLHANYLMGSLFFSLFKLLADGLPELTLTISRIAVFCKQKELYFYPAWAYAIPSAILKIPISFLESFLWTMLTYYVIGYSPEMGRFIRQFLILFALHLSCISMFRAIAAVFRDFVVATTVGSISIVLLSVFGGFIVRKPSMPSWLEWGFWLSPLSYAEIGLTANEFFAPRW----GKITSENRTLGEQVLDARGLNFGNQSYWNAFGALIGFTLFFNTVFALALTFL 760          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.753e-43
Identity = 89/230 (38.70%), Postives = 130/230 (56.52%), Query Frame = 1
Query:   10 DLEGGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRW-DVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLN 696
            D   GN   G++F +L  ++ +G+ EL++T+ RL VF KQ+D  FYPAWA+A+P  +LRIPLS+LDS IW VLTYY IG++P   RFF+ ++     H   + ++R IA+I RT V  +  G                K  +  +L WG+++SP+ Y +  +  +EF   RW  + SG+      T G+ +L  RG     + YW   GAL+GF   FN L+  ALTY N
Sbjct:  535 DARHGNYLMGSMFTALFRLLADGLPELTLTISRLGVFCKQKDLYFYPAWAYAIPSIILRIPLSVLDSFIWTVLTYYVIGYSPEVGRFFRHFIILLTFHLSCISMFRAIASICRTFVACSITGAISVLLLALFGGFVIPKSSMPTWLGWGFWLSPLSYAEIGLTANEFFSPRWRKLTSGN-----ITAGEQVLDVRGLNFGRHSYWTAFGALVGFVLFFNALYTLALTYRN 759          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.152e-42
Identity = 86/231 (37.23%), Postives = 133/231 (57.58%), Query Frame = 1
Query:    1 SVGDLEGGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRWDVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYL 693
            S  D    N   G+LFFSL+ ++ +G+ EL++TV R+ VF KQ++  FYPAWA+A+P  +L+IP+S L+S +W +LTYY IG++P A RF +Q L  F +H   + ++R I A+ R   +   +G+               K  +  +LEWG+++SP+ Y +  +  +EF    W   + +     RTLG+ +L  RG    +  YW   GALIGF+  FN +F  ALT+L
Sbjct:  532 STRDSLHANYLMGSLFFSLIKLLADGLPELTLTVSRIAVFCKQKELYFYPAWAYAIPSAILKIPISFLESFLWTMLTYYVIGYSPEAGRFIRQVLILFALHLSCISMFRAIGAVFRDFDVATTIGSISIVLLSVFGGFIVRKPSMPSWLEWGFWLSPLSYAEIGLTSNEFFAPMWRKMTSE----NRTLGEQVLDARGLNFGNQSYWNAFGALIGFTLFFNTVFALALTFL 758          
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.504e-42
Identity = 86/225 (38.22%), Postives = 128/225 (56.89%), Query Frame = 1
Query:   22 GNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRWDVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLN 696
            GN   G+LF +L  ++ +G+ EL++T+ RL VF KQ+D  FYPAWA+A+P  +L+IPLS+LDS IW +LTYY IG++P   RFF Q+L     +   + ++R IAAI RT + +   G                K  +  +L WG+++SP+ Y +  +  +EF   RW      ++    T G+ +L  RG     + YW   GAL+GF   FN L++ ALTY N
Sbjct:  542 GNYLMGSLFTALFRLLADGLPELTLTISRLGVFCKQKDLYFYPAWAYAIPSIILKIPLSVLDSFIWTLLTYYVIGYSPEVKRFFLQFLILSTFNLSCVSMFRAIAAIFRTIIASTITGAISILVLSLFGGFVIPKSSMPAWLGWGFWLSPLSYAEIGLTANEFFSPRWSKVISSKT----TAGEQMLDIRGLNFGRHSYWTAFGALVGFVLFFNALYVLALTYQN 762          
The following BLAST results are available for this feature:
BLAST of FC931104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
AB35G_ARATH1.228e-5244.10ABC transporter G family member 35 OS=Arabidopsis ... [more]
AB29G_ARATH3.572e-5243.83ABC transporter G family member 29 OS=Arabidopsis ... [more]
PDR15_ORYSJ4.666e-5244.49Pleiotropic drug resistance protein 15 OS=Oryza sa... [more]
PDR3_TOBAC1.960e-5041.45Pleiotropic drug resistance protein 3 OS=Nicotiana... [more]
AB37G_ARATH1.659e-4940.79ABC transporter G family member 37 OS=Arabidopsis ... [more]
AB33G_ARATH7.708e-4739.47ABC transporter G family member 33 OS=Arabidopsis ... [more]
AB42G_ARATH9.423e-4538.10ABC transporter G family member 42 OS=Arabidopsis ... [more]
AB41G_ARATH6.753e-4338.70ABC transporter G family member 41 OS=Arabidopsis ... [more]
AB43G_ARATH1.152e-4237.23ABC transporter G family member 43 OS=Arabidopsis ... [more]
AB30G_ARATH1.504e-4238.22ABC transporter G family member 30 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC34101E02EF PostHarvP1 Citrus clementina cDNA clone C34101E02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931104 ID=FC931104; Name=FC931104; organism=Citrus clementina; type=EST; length=724bp
TCAGTGGGAGATCTGGAAGGTGGCAATAAGTATTTCGGAGCACTGTTTTT
CAGTCTGCTTAATATTATGTTTAACGGGATGGCAGAACTTTCAATGACTG
TTTTGAGGCTACCTGTATTTTATAAACAAAGGGATCACTTATTCTATCCT
GCGTGGGCTTTTGCCTTACCTATATGGGTTCTCCGGATCCCATTATCAAT
CCTGGATTCAACAATATGGATCGTTCTGACCTACTACACAATAGGTTTTG
CTCCAGCAGCAAGCAGGTTCTTCAAACAATACTTGGCATACTTTTGTATA
CACAATATGGCTCTGCCCCTTTACCGGTTCATTGCTGCTATTGGAAGAAC
TGAGGTTATTACAAACGCACTGGGTACTTTCGCCTTGTTACTCATTTTTT
CACTCGGAGGATTCATCATTGCCAAAGATGACATTGAGCCATTCCTGGAA
TGGGGCTACTATGTTTCGCCTATGATGTATGGACAGACTTCCATACTTGT
AGATGAATTCCTTGATGGAAGATGGGATGTGCCCAGTGGAGACCGCAGCA
TTAATGAACGTACACTTGGGAAAGCACTTCTCAAGAGGAGAGGCTTCTAC
AATGACAGTTACTGGTATTGGATTGGCATCGGAGCACTGATTGGATTTTC
TTTTCTCTTCAACTTTTTGTTTATTGCAGCATTGACTTACTTGAATCCTA
TCGGTGAATTCAACTCAACTGTCG
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