FC931104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.837e-41 Identity = 87/231 (37.66%), Postives = 129/231 (55.84%), Query Frame = 1 Query: 13 LEGGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRWDVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLNPIG 705 +E G Y GA++ + I+F+G EL MT+ +LPVFYKQR FYP+WAF+LP ++ PLS ++ I +++TY+TIG+ F K YL M+ L+R IAA+ R V++N +G ++ + +L W Y+ SPMMY QT++ V+EF W + LG A+LK RGF+ ++YWYWIG+ ALI + L N + L +L G Sbjct: 545 VEDGIIYMGAIYLEVQMIVFSGFFELPMTIDKLPVFYKQRHFSFYPSWAFSLPTSIITFPLSFVEVFIVVLITYFTIGYDLTVPSFLKHYLVLALCGQMSYGLFRCIAAVTRNHVVSNTMGCLAVMWLMTFSGYVLSRNQVHKWLTWAYWTSPMMYIQTAVSVNEFRSESW----------KDGLGVAVLKSRGFFVETYWYWIGLLALILSTILSNIITSLCLAFLKQYG 765
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: ABCG2_DICDI (ABC transporter G family member 2 OS=Dictyostelium discoideum GN=abcG2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.047e-15 Identity = 57/235 (24.26%), Postives = 102/235 (43.40%), Query Frame = 1 Query: 22 GNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEF------LDGRWDVP--------------SGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNF 666 GN G +FFSLL I+F+GM +++ + VFY Q+D +Y +AF L + IP+++L++ ++ VL Y+ G A +F L F ++ ++A + + + K I + W Y++SP+ Y ++ +E D +P SG+ SI + T G L + G ++++ WI + + F LF+F Sbjct: 422 GNNRSGLIFFSLLFIVFSGMGAIAILFEQREVFYIQKDGKYYKTFAFFLSLIFSEIPIALLETVVFCVLVYWMCGLQANAEKFIYFLLMNFVGDLAFQSFFKMVSAFAPNATLASVIAPAALAPFILFSGFMAPKRSIGGWWIWIYWISPIKYAFEGLMSNEHHGLIYSCDDSETIPPRNTPNFELPYPRGSGNSSICQITRGDQFLDQLGMPQNNWFKWIDLLIVFAFGALFSF 656
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.733e-14 Identity = 53/244 (21.72%), Postives = 102/244 (41.80%), Query Frame = 1 Query: 22 GNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEF--------------------LDGRWDVPSGDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYL 693 G+ G LFFSLL +F G +S+ + VFY +R +Y + L + V +P+SI++ I+ Y+ G RF +L M+L + R + + +T+ +A+ ++I + W Y++SP+ YG +L++E + + V + T G+ +L GF+ + Y+ W+ + + F+ LF + + + +L Sbjct: 479 GSNRSGLLFFSLLTFVFGGFGSISVFFDQRQVFYSERAWKYYNTITYFLSMIVTDLPMSIVEVLIFSNFVYWMTGLNKTWDRFIYFFLTCLVCDVMSLSIIRSVCSFTKTKYAASAISPAVVSPFILMCGYMKHSNEIPGWWIWLYWISPIHYGFEGLLLNEHSGLDYHCSPDELMPPSFLPTFNTSYPVGFEGNQVCPITKGEQILDSIGFHTEFYYRWVDLAIISAFTLLFWLITLVCMKFL 722
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: ABCG6_DICDI (ABC transporter G family member 6 OS=Dictyostelium discoideum GN=abcG6 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.733e-14 Identity = 57/245 (23.27%), Postives = 97/245 (39.59%), Query Frame = 1 Query: 19 GGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFLDGRWDVPS-------------------GDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLN 696 GG + FG LFF ++ I+F+ A ++ VFY Q+ +Y A+ + + IP IL+ + + Y+ P RF L N++L + AAI T I N + + K+DI + W YY+SP + + ++EF + + G + + T G+ ++ G N +Y+ W+ G L + F + AL Y N Sbjct: 514 GGMERFGLLFFIMVTIIFSSFAAVNSFFGERKVFYSQKALYYYKTGAYFISSIICDIPAGILEVAFFGPIVYWLANLRPVFIRFVYFMLLLIMTDNLSLSFAKMCAAISPTIEIANVIASVILSIWLLFSGFTAPKNDIGGWWIWLYYISPYTWIFQGLSINEFTYQEYGCKTSELIPPRTPQNLLPYPEGFGGNQVCQFTSGEQIMDAFGITNPNYFKWVVFGILSAYIVFFYVVCFFALKYFN 758
BLAST of FC931104 vs. ExPASy Swiss-Prot
Match: ABCG5_DICDI (ABC transporter G family member 5 OS=Dictyostelium discoideum GN=abcG5 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13 Identity = 58/245 (23.67%), Postives = 95/245 (38.78%), Query Frame = 1 Query: 19 GGNKYFGALFFSLLNIMFNGMAELSMTVLRLPVFYKQRDHLFYPAWAFALPIWVLRIPLSILDSTIWIVLTYYTIGFAPAASRFFKQYLAYFCIHNMALPLYRFIAAIGRTEVITNALGTXXXXXXXXXXXXXXXKDDIEPFLEWGYYVSPMMYGQTSILVDEFL-------DGRWDVPS------------GDRSINERTLGKALLKRRGFYNDSYWYWIGIGALIGFSFLFNFLFIAALTYLN 696 GG + FG LFF + I+F+ A ++ VFY Q+ +Y A+ + + IP +++ + + Y+ P RF + F N++L + AAI T I N + K+DI + W YY+SP + + ++EF D P G + + T G+ ++ G N Y+ WI L + F + AL YLN Sbjct: 505 GGMERFGLLFFIMTTIIFSSFAAVNSFFGERKVFYSQKALHYYKTGAYFISSIICDIPAGLIEVAFFGPIVYWLANLRPVFIRFVYFMILLFITDNLSLSFAKMCAAISPTIEIANVTASVILSIWLLFSGFTAPKNDIGGWWIWLYYISPYTWIFQGLSINEFTYQAYGCKDSELIPPRTPQNLLPYPEGFGGNQVCQYTSGEQIMDAFGINNPDYFKWIVYAILGAYIVFFYSVCFFALKYLN 749 The following BLAST results are available for this feature:
BLAST of FC931104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931104 ID=FC931104; Name=FC931104; organism=Citrus clementina; type=EST; length=724bpback to top |