FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:92..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH_STAAB (Alcohol dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=adh PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 67/266 (25.19%), Postives = 115/266 (43.23%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST--VFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD-VILDCMGASYFQRNLDSLNIDGRL 719
            M+A V+T+      + +++ +   +K  E L++ E   +   D   +   +    G +   G E  G ++ V ++V   K+GD+V                      C  +   GY      AE+V V A   + VP  +   D AA   + C   +T      S++ PG+   V G   G+G  A+Q  K   G ++     +++KLA  K+LGAD  IN K  D VA V + T  KG+D  ++  +  + F + +D +    R+
Sbjct:    1 MRAAVVTKDHK---VSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKL---DPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFG-IGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARV 257          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH_STAA8 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain NCTC 8325) GN=adh PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 67/266 (25.19%), Postives = 115/266 (43.23%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST--VFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD-VILDCMGASYFQRNLDSLNIDGRL 719
            M+A V+T+      + +++ +   +K  E L++ E   +   D   +   +    G +   G E  G ++ V ++V   K+GD+V                      C  +   GY      AE+V V A   + VP  +   D AA   + C   +T      S++ PG+   V G   G+G  A+Q  K   G ++     +++KLA  K+LGAD  IN K  D VA V + T  KG+D  ++  +  + F + +D +    R+
Sbjct:    1 MRAAVVTKDHK---VSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKL---DPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFG-IGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARV 257          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH_STAA3 (Alcohol dehydrogenase OS=Staphylococcus aureus (strain USA300) GN=adh PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 67/266 (25.19%), Postives = 115/266 (43.23%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGY------AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST--VFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD-VILDCMGASYFQRNLDSLNIDGRL 719
            M+A V+T+      + +++ +   +K  E L++ E   +   D   +   +    G +   G E  G ++ V ++V   K+GD+V                      C  +   GY      AE+V V A   + VP  +   D AA   + C   +T      S++ PG+   V G   G+G  A+Q  K   G ++     +++KLA  K+LGAD  IN K  D VA V + T  KG+D  ++  +  + F + +D +    R+
Sbjct:    1 MRAAVVTKDHK---VSIEDKKLRALKPGEALVQTEYCGVCHTDLHVKNADFGDVTGVTL--GHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGYTVDGAMAEQVIVTADYAVKVPEKL---DPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFG-IGGLGNLALQYAKNVMGAKIVAFDINDDKLAFAKELGADAIINSKDVDPVAEVMKLTDNKGLDATVVTSVAKTPFNQAVDVVKAGARV 257          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ADH_STAAB8.902e-1125.19Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA88.902e-1125.19Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAA38.902e-1125.19Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
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