FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:92..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PHAS_MYCBP (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=pks2 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.043e-23
Identity = 61/228 (26.75%), Postives = 112/228 (49.12%), Query Frame = 3
Query:   33 ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGR 716
            I  PG  + ++L           ++ + V A+++N AD L   G YP  +G  P  G + +G + +VG  V+  KVGD V  +   G +   V   A     +P G+    AAA      T W  +   + +  G++ L+H G+ G+G  AI + +  G  +F TAG+ ++  + +++G +   + ++ +F  +++ +T G+GVDV+L+ +  +     L  L   GR
Sbjct: 1432 IRTPGDMQTIELAAFHRVPPGPGQIEVAVRASSVNFADVLIAFGRYPSFEGHLPQLGTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYDSRSIEFAEQIRRDTNGRGVDVVLNSVTGAAQLAGLKLLAFRGR 1659          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PHAS_MYCBO (Phthioceranic/hydroxyphthioceranic acid synthase OS=Mycobacterium bovis GN=pks2 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.043e-23
Identity = 61/228 (26.75%), Postives = 112/228 (49.12%), Query Frame = 3
Query:   33 ITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGR 716
            I  PG  + ++L           ++ + V A+++N AD L   G YP  +G  P  G + +G + +VG  V+  KVGD V  +   G +   V   A     +P G+    AAA      T W  +   + +  G++ L+H G+ G+G  AI + +  G  +F TAG+ ++  + +++G +   + ++ +F  +++ +T G+GVDV+L+ +  +     L  L   GR
Sbjct: 1432 IRTPGDMQTIELAAFHRVPPGPGQIEVAVRASSVNFADVLIAFGRYPSFEGHLPQLGTDFAGVVTAVGPGVTDHKVGDHVGGMSPNGCWGTFVTCDARLAATLPPGLGDAQAAAVTTAHATAWYGLHELARIRAGDTVLIHSGTGGVGQAAIAIARAAGAEIFATAGTPQRRELLRNMGIEHVYDSRSIEFAEQIRRDTNGRGVDVVLNSVTGAAQLAGLKLLAFRGR 1659          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: VAT1_TORCA (Synaptic vesicle membrane protein VAT-1 OS=Torpedo californica PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22
Identity = 74/244 (30.33%), Postives = 127/244 (52.05%), Query Frame = 3
Query:    3 ESEGTMKAIVITQPGSPEVLQLQEVED-PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL-LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFI 725
            E E +  AIV+   G  + ++++  +  P +K DE+L++V+A  LN +D L R+G++    G     G EC+G + ++G  V   KVGD++  L + GG + E V     +   +P G+S ++AAA        +  ++  ++L P +S L+H  + G+G  A Q+ K    V +F TA S  K    K+ G    I+Y T D+   V+ +   KGVD++LD +G +   +    L   G+L +
Sbjct:   22 EPEISYNAIVLNGVGGYDKVKVEVKKGVPTLKSDEILVRVQACGLNFSDLLVRQGAF----GKHHSLGTECAGVVEAIGDLVIDRKVGDKIIMLNIDGGLWTELVVTTVNRTFLMPDGMSFQEAAAISVNYTAAYVMIYDFANLRPSQSILIHMAAGGVGIAATQLCKLVHDVTIFGTA-SPSKHETIKENGVTYPIDYTTLDYAEEVR-KIAPKGVDIVLDPLGGADDSKGFGLLKPLGKLVL 259          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: MCAS_MYCBO (Mycocerosic acid synthase OS=Mycobacterium bovis GN=mas PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22
Identity = 55/230 (23.91%), Postives = 114/230 (49.57%), Query Frame = 3
Query:   27 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGR 716
            + + +PG  + L+    +       ++ + V  +++N AD L   G +P      P  G++  G + +VG+ V+  +VGD+V     GG +   +   A   + +P G++ + A        T W  +   + +  G+  L+H  + G+G  AI + + +G  +F TAG+  K A+ +D+G +   + ++ +F  +++ +T G GVD++L+ +  +  +  L+ L   GR
Sbjct: 1423 VQVRRPGDLQTLEFVASDRVPPGPGQIEVAVSMSSINFADVLIAFGRFPIIDDREPQLGMDFVGVVTAVGEGVTGHQVGDRVGGFSEGGCWRTFLTCDANLAVTLPPGLTDEQAITAATAHATAWYGLNDLAQIKAGDKVLIHSATGGVGQAAISIARAKGAEIFATAGNPAKRAMLRDMGVEHVYDSRSVEFAEQIRRDTDGYGVDIVLNSLTGAAQRAGLELLAFGGR 1652          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: YGD6_SCHPO (Zinc-type alcohol dehydrogenase-like protein C1773.06c OS=Schizosaccharomyces pombe GN=SPBC1773.06c PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22
Identity = 76/245 (31.02%), Postives = 119/245 (48.57%), Query Frame = 3
Query:   60 LQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVC------------------ALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH--LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            L+ +E E PQ +   EVL+K++A +LN  D +  KG YP P      PG + +G I  VG++V  ++ GD V                   + LGG   G + +   +PA  ++  P  +S ++ A  P  A T W+ +F +    + PG + LV G + G+ TFA+Q     G  V VT+ S+EKL   K LGA   INY KT  + +   + T G G   +++  G     +++  L  DG +
Sbjct:   17 LKPEEYEVPQKLNPGEVLVKLKAASLNYRDLIITKGLYPLPLQLPVVPGSDGAGIIEKVGEDVEGFEKGDSVVCNFFTNYLDGTPTDFATHSALGGTRDGCFQKYAVLPAHALVHAPKNLSFEEIATLPCAAVTAWNGLFGSKEHQVKPGNNVLVLG-TGGVSTFALQFALAAGANVTVTSSSDEKLEFAKKLGATHTINYKKTPQWASPALKMTNGVGYHHVIEVGGEKTLPQSIACLAKDGMI 260          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: QOR_SCHPO (Probable quinone oxidoreductase OS=Schizosaccharomyces pombe GN=zta1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.571e-22
Identity = 73/233 (31.33%), Postives = 111/233 (47.64%), Query Frame = 3
Query:   27 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPY-PGLECSGTILSVGKNVSR-WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            + +++ G   VLQ+   E P+   + ++IK     LN  DT  R G Y  P    PY PG E +G + +VG  V   +KVGD+V  L   G YA+   VP   V  V   + LK A+A      T ++ +     +  G++ +VH  + G+G    QM + + V V  TA +  K  +    GA++  +Y  ED    V + T GKGVD   D +G      +LD+L   G +
Sbjct:    6 VQVSKTGPSSVLQVITKEIPKPAPNGLVIKNAYAGLNYIDTYLRTGLYTAPL---PYIPGKEAAGVVAAVGDKVEADFKVGDRVVYLTPFGAYAQYTNVPTTLVSKVSEKIPLKIASAALLQGLTAYTLIEEAYPVKTGDTVVVHAAAGGVGLLLCQMLRARNVHVIATASTAAKRRIAIKNGAEIACSY--EDLTKVVADYTNGKGVDAAYDSVGIDTLSSSLDALRNGGTM 233          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: QORL2_RAT (Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.464e-21
Identity = 74/236 (31.36%), Postives = 106/236 (44.92%), Query Frame = 3
Query:   21 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG-KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFI 725
            +A V T+   P  L +QEV    I   EV + V    +N AD L  +G Y         PG+E SG +L  G +VS  K GD+V  +      AE+       +  +P  VSL+DAA  P    T    V   + + PGE+ LV   +   G   I +       +V   AGS+EK  +    GA   +NY        VK+  G  GV+V +D +G   F  +L SL  +GR+ +
Sbjct:   28 RAAVCTELKQP--LTIQEVAPRPIGPQEVRVDVHFCGINFADNLVCRGQYQEKPPLPFTPGMEFSGVVLEAGADVSTVKKGDRVIGVSNFHSMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFCAKVIAAAGSDEKCKLAMQRGAQSGVNYSQGSLKDAVKKLVGSSGVNVAIDMVGGDVFLDSLRSLAWEGRIVV 261          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.464e-21
Identity = 70/226 (30.97%), Postives = 104/226 (46.02%), Query Frame = 3
Query:   60 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMG-KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFI 725
            L ++EV    ++  EV + V    +N AD L  +G Y         PG+E SG +L  G +VS  K GD+V  L G  G AE+       +  +P  VSL++AAA P    +  + +F   H     PGE+ LV   +   G   I +       +V   AGS+EK  +    GA   +NY        V +  G  GV+V++D +G   F   L SL  +GR+ +
Sbjct:   38 LVIEEVTPRPVQPHEVRVNVHFCGINFADILACQGQYQERHQLPFTPGMEFSGMVLETGTDVSTVKEGDRVIGLPGFSGMAEECITDHKNLWQIPEKVSLREAAALP---VSYGTAIFALEHRACTQPGETVLVTAAAGATGLAVIDVATNILQAKVIAAAGSDEKCQLAMQSGAQSSVNYSRGSLKEAVGKLVGSGGVNVVIDMVGGDIFLEALRSLAYEGRIVV 260          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.497e-21
Identity = 64/232 (27.59%), Postives = 115/232 (49.57%), Query Frame = 3
Query:   21 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDG 713
            +A++  + G P V++  +     +   +V + V +  +N AD L+  G Y         PG E SG ++ VG  V+    GD+V  + G GGG AE+  +P   +  +PS +S   AAA      T +  +   ++L PG++ LV   +  +G  ++ +         + A  +EKL + +++GA   I+Y  E+   +VKE T G G +VI++ +G   F++ L  +  +G
Sbjct:   40 RAVMCNELGKPLVVE-DKFSTENLGTSQVRVAVHSCGINFADILKCIGKYQEKPELPFVPGTEISGEVVEVGSKVTSLSKGDRVLGVCGQGGGMAEECVLPQTALWKIPSSLSFTQAAALAISYGTAYIGLKHKANLQPGQTVLVTAAAGALGLASVDLAANVFGAKVIGASRKEKLVIVQEIGATATIDYTRENIKDKVKELTDGHGANVIMEAVGGDVFKQCLKCIAWNG 270          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.489e-21
Identity = 71/236 (30.08%), Postives = 105/236 (44.49%), Query Frame = 3
Query:   21 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG-KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFI 725
            +A + T+   P  L +QEV    +   EV + V    +N AD L  +G Y         PG+E SG +L  G +VS  K GD+V  +      AE+       +  +P  VSL+DAA  P    T    V   + + PGE+ LV   +   G   I +       +V    GS+EK  +    GA   +NY        VK+  G  GV+V +D +G   F  +L SL  +GR+ +
Sbjct:   28 RAALCTELKQP--LTIQEVAPRPVGPQEVRVDVHFCGVNFADILACRGQYQEKPPLPFTPGMEFSGAVLETGTDVSTVKKGDRVIGVSSFHAMAEQCITDQKTLWRIPENVSLQDAAVLPVSYGTAILAVDHRARIQPGETVLVTAAAGATGLAVIDVATNVFRAKVIAATGSDEKCKLAVQRGAQFSVNYSQGSLRDAVKKLAGSGGVNVAIDMVGGDVFLESLRSLAWEGRIVV 261          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
PHAS_MYCBP2.043e-2326.75Phthioceranic/hydroxyphthioceranic acid synthase O... [more]
PHAS_MYCBO2.043e-2326.75Phthioceranic/hydroxyphthioceranic acid synthase O... [more]
VAT1_TORCA2.258e-2230.33Synaptic vesicle membrane protein VAT-1 OS=Torpedo... [more]
MCAS_MYCBO5.031e-2223.91Mycocerosic acid synthase OS=Mycobacterium bovis G... [more]
YGD6_SCHPO6.571e-2231.02Zinc-type alcohol dehydrogenase-like protein C1773... [more]
QOR_SCHPO6.571e-2231.33Probable quinone oxidoreductase OS=Schizosaccharom... [more]
QORL2_RAT1.464e-2131.36Quinone oxidoreductase-like protein 2 OS=Rattus no... [more]
QORL2_BOVIN1.464e-2130.97Quinone oxidoreductase-like protein 2 OS=Bos tauru... [more]
QORL2_NEMVE2.497e-2127.59Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
QORL2_MOUSE9.489e-2130.08Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
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