FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:92..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ERYA2_SACER (Erythronolide synthase, modules 3 and 4 OS=Saccharopolyspora erythraea GN=eryA PE=1 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.375e-18
Identity = 69/217 (31.80%), Postives = 102/217 (47.00%), Query Frame = 3
Query:   72 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDG 713
            +VE P ++  EV + V AT +N  D L   G YP         G E +G + +VG +V  +  GD+V  L  G      +AV   ++L  VP G S  DAAA P    T    +   + L  G+S L+H  + G+G  A+ + +  G  V  TAG   K    + LG D     + +   F  + +E TGG+GVDV+L+ +       + D L  DG
Sbjct: 2843 DVEQP-LRAGEVRVDVRATGVNFRDVLLALGMYPQKADM----GTEAAGVVTAVGPDVDAFAPGDRVLGLFQGA--FAPIAVTDHRLLARVPDGWSDADAAAVPIAYTTAHYALHDLAGLRAGQSVLIHAAAGGVGMAAVALARRAGAEVLATAG-PAKHGTLRALGLDDEHIASSRETGFARKFRERTGGRGVDVVLNSLTGELLDESADLLAEDG 3051          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: RT4I1_DANRE (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18
Identity = 82/251 (32.67%), Postives = 113/251 (45.02%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQLQEVEDPQI--KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP--------------GLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGES----FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSL 701
            M A VI + G  +VL+  +     I    +EV++KV A  LN  D   R G           P              G + SG I+  G +V  +K GDQV A +     G  AE V V   +V   P  +   +AA+ P VA T WS +  T  L+   S     L+ GGS G+GTFAIQM K  G  V VT  S+    + +DLGAD  ++Y       ++K     +  D+ILD +G    +  LD L
Sbjct:   29 MPAWVIDKYGKNDVLRFTKNAALPIIHYPNEVVVKVHAAGLNPIDISMRGGYGAATMAMKRDPLNISQSGGEFPLILGRDVSGEIMECGLDVKYFKPGDQVWAAIPPWKQGSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQMVKAWGAHVTVTC-SQNAERLVRDLGADDVVDYTAGPVEKQLKNL---EKFDLILDSIGGETEKWALDLL 275          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: QOR_LEIAM (Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18
Identity = 70/219 (31.96%), Postives = 104/219 (47.49%), Query Frame = 3
Query:   87 QIKDDEVLIKVEATALNRADTLQRKGSY----PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFI 725
            ++ +  V + V+   +N +D     GSY     PP       G E +GT++ +G  V+  KVGD V  L+  G +AE +  PA + +PVP    LK + +  P  A T    +     +  G+  LV   + G G  A+Q+ K   G  V  T  SEEK    K +G D  INYKTE    R+  E   KGVDV+ +C+G   F   +  + +  R+ I
Sbjct:   33 EVPEGMVRVSVKYAGVNASDLNFTNGSYFKNVQPPFDC----GFEAAGTVVQIGAGVANVKVGDHV-VLMQYGCFAEFLDAPAERCIPVPE---LKPEYSVLPVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYGCTVIGTCSSEEKAEFLKSIGCDHVINYKTESLDGRL-HELCPKGVDVVYECVGGHTFNDAVRHVAVHARVVI 242          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS1_DICDI (Probable polyketide synthase 1 OS=Dictyostelium discoideum GN=stlA PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18
Identity = 70/232 (30.17%), Postives = 102/232 (43.97%), Query Frame = 3
Query:   75 VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGA-----SPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG------VRVFVTAGSEEKLAVCKDLGADVCINYKTED----FVARVKEETG--GKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            ++   + ++++ IKVE   +N  D L  KG  P          +P  GLECSG I  +G NV+ + VG  V            V      V+  P  +S  +AA+ P V CT W ++F    LS  ES L+H  + G+G  ++ + K +         V+ T GS EK    K    D   N   ED    F  R KE +      +DVIL+ +   + + N  SL   GRL
Sbjct: 1948 IKQSMLTENQIEIKVECVGINFKDNLFYKGLLPQEIFRMGDIYNPPYGLECSGVITRIGSNVTEYSVGQNVFGF-ARHSLGSHVVTNKDLVILKPDTISFSEAASIPVVYCTAWYSLFNIGQLSNEESILIHSATGGVGLASLNLLKMKNQQQQPLTNVYATVGSNEK----KKFLIDNFNNLFKEDGENIFSTRDKEYSNQLESKIDVILNTLSGEFVESNFKSLRSFGRL 2174          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZADH2_BOVIN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 72/240 (30.00%), Postives = 112/240 (46.67%), Query Frame = 3
Query:   18 MKAIVITQ--PGSPEVLQLQ-EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVA-CTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGRLFI 725
            M+ +V+T+  P   E + L+ +   P   D ++L++     +N +D     G Y P        G E  G ++++G + S   +  Q  A +  G +AE   VPA   +PVP    LK       V+  T + ++     LS G+  LV   + G G FA+Q+ K     V  T  S EK A  K +G D  INY TE  V  V  +   +GVDV+ + +G + F   +D+L   GRL +
Sbjct:   33 MQKLVVTRLSPNFREAVTLRRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKTPFDAGFEGVGEVVALGLSASAAFMVGQAVAYMAPGSFAEYTVVPARVAIPVPG---LKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTE-HVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIV 268          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH3_KLULA (Alcohol dehydrogenase 3, mitochondrial OS=Kluyveromyces lactis GN=ADH3 PE=3 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 63/236 (26.69%), Postives = 108/236 (45.76%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGG 635
            T K ++  + G    L+ +++  P+ K +E+LI V+ + +   D    KG +P P       G E +G ++++G+NV  W +GD              + C L          L G    G + +     A Q   +P G  L + A       TV+  +  +++L  G+   + G + G+G+ A+Q  K  G RV    G EEK  + K LG +  +++ KT+D VA ++E T G
Sbjct:   32 TQKGVIFYENGGK--LEYKDIPVPKPKPNEILINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWNIGDFAGIKWLNGSCMSCEYCELSNESNCPDADLSGYTHDGSFQQYATADAVQAARIPKGTDLAEVAPILCAGVTVYKAL-KSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVVGIDGGEEKGKLVKQLGGEAFVDFTKTKDMVAEIQEITNG 264          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: RT4I1_BOVIN (Reticulon-4-interacting protein 1, mitochondrial OS=Bos taurus GN=RTN4IP1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.873e-17
Identity = 78/242 (32.23%), Postives = 113/242 (46.69%), Query Frame = 3
Query:   18 MKAIVITQPGSPEVLQL-QEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP--------------GLECSGTILSVGKNVSRWKVGDQVCALLGG---GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP----GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 674
            M A VI + GS EVL+  Q +  P I   +EV+IKV A ++N  D   R G           P              G + SG ++  G +V  +K GD+V A +     G  +E V V   +V   P  ++   AA+ P VA T WS +     L+     G+  L+ G S G+GTFAIQ+ K     V     S++   + + LGAD  I+YK+ +  A++K     K  D ILD +G S
Sbjct:   43 MPAWVIDKYGSNEVLRFTQNMMIPMIHYPNEVIIKVHAASINPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVRYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPRSLTHTQAASLPYVALTAWSAINKVGGLNDRNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGADDVIDYKSGNVEAQLK---SSKPFDFILDNVGGS 280          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ZDH1_STAAR (Zinc-type alcohol dehydrogenase-like protein SAR2277 OS=Staphylococcus aureus (strain MRSA252) GN=SAR2277 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 65/217 (29.95%), Postives = 104/217 (47.93%), Query Frame = 3
Query:   18 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGG-----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP------GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEE 626
            MK I   +P   E   + ++ E   P  ++D++L+KV + ++N  DT QR+        A    G +  GT+ ++G NV+ +  GD V     G     G  A    V    V   P  +S  +A + P    T + T F T  +S       G+S L+  G+ G+G+ A Q+ K  G+ V  TA  +E    C+ +GAD+ +N+K ED V + KE+
Sbjct:    1 MKMIGFEKPFKLEEGNLFKVYEQRKPTPENDDILVKVNSISVNPVDTKQRQMEVTQ---APRVLGFDAIGTVEAIGPNVTLFSPGDVV--FYAGSPNRQGSNATYQLVSEAIVAKAPHNISANEAVSLPLTGITAYETFFDTFKISHNPSENIGKSVLIINGAGGVGSIATQIAKRYGLTVITTASRQETTEWCEKMGADIVLNHK-EDLVRQFKEK 211          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS40_DICDI (Probable polyketide synthase 40 OS=Dictyostelium discoideum GN=pks40 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 64/222 (28.83%), Postives = 108/222 (48.65%), Query Frame = 3
Query:   90 IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEEKLAVCKDLGADV---CINYKTEDFVARVKEET------GGKGVDVILDCMGAS-YFQRNLDSLNIDGRL 719
            +K++EV IKV +T LN  D L   G     +   P  G+E SG I ++G     +KVGD V    G    +  +      +   PS +S  +A++ P V  T + +++    L   E+ L+H  + G+G   +++ K +G    +FVT GS EK    ++   D+     + + ++FV ++K +       G  GVD IL+ + +S Y   N   LN+ GR+
Sbjct: 1840 LKENEVEIKVMSTGLNYKDYLIYAGLV---ESVEPIFGIEFSGIITNIGSGNKEFKVGDSVYGT-GKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRI 2057          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 66/236 (27.97%), Postives = 106/236 (44.92%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVC----------ALLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGG 635
            T KA++    G    L+ +++  P+ K +E+LI V+ + +   D    KG +P         G E +G ++++G+NV  WKVGD              + C          A L G    G + +     A Q   +P+G  L + A       TV+  +  T+ L  G+   + G + G+G+ A+Q  K  G RV    G E+K    K LGA+  I++ K +D V  VK+ T G
Sbjct:    6 TQKAVIFETNGGK--LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNCAEADLSGYTHDGSFQQYATADAVQAARIPAGTDLANVAPILCAGVTVYKAL-KTAELEAGQWVAISGAAGGLGSLAVQYAKAMGYRVLAIDGGEDKGEFVKSLGAETFIDFTKEKDVVEAVKKATNG 238          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ERYA2_SACER3.375e-1831.80Erythronolide synthase, modules 3 and 4 OS=Sacchar... [more]
RT4I1_DANRE4.408e-1832.67Reticulon-4-interacting protein 1 homolog, mitocho... [more]
QOR_LEIAM5.757e-1831.96Probable quinone oxidoreductase OS=Leishmania amaz... [more]
PKS1_DICDI5.757e-1830.17Probable polyketide synthase 1 OS=Dictyostelium di... [more]
ZADH2_BOVIN1.282e-1730.00Zinc-binding alcohol dehydrogenase domain-containi... [more]
ADH3_KLULA1.282e-1726.69Alcohol dehydrogenase 3, mitochondrial OS=Kluyvero... [more]
RT4I1_BOVIN4.873e-1732.23Reticulon-4-interacting protein 1, mitochondrial O... [more]
ZDH1_STAAR6.365e-1729.95Zinc-type alcohol dehydrogenase-like protein SAR22... [more]
PKS40_DICDI1.418e-1628.83Probable polyketide synthase 40 OS=Dictyostelium d... [more]
ADH2_CANAL1.418e-1627.97Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]

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Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
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