FC931140

Overview
NameFC931140
Unique NameFC931140
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12734 contig Ccv1_Contig12734:92..817. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_KLUMA (Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus GN=ADH1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 65/242 (26.86%), Postives = 109/242 (45.04%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVI 653
            T K ++  + G    LQ +++  P+ K +E+LI V+ + +   D    +G +P         G E +G ++++G+NV+ W++GD              + C L          L G    G + +     A Q   +P  V L + A       TV+  +  ++H+  G+   + G   G+G+ AIQ  K  G RV      +EK  + K+LG +  I++ KT+D VA V E T G    VI
Sbjct:    6 TQKGVIFYEHGGE--LQYKDIPVPKPKPNELLINVKYSGVCHTDLHAWQGDWPLDTKLPLVGGHEGAGIVVAMGENVTGWEIGDYAGIKWLNGSCMSCEECELSNEPNCPKADLSGYTHDGSFQQYATADAVQAARIPKNVDLAEVAPILCAGVTVYKAL-KSAHIKAGDWVAISGACGGLGSLAIQYAKAMGYRVLGIDAGDEKAKLFKELGGEYFIDFTKTKDMVAEVIEATNGVAHAVI 244          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 66/236 (27.97%), Postives = 104/236 (44.07%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVC----------ALLGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGG 635
            T KA+V    G   V +   V  P  K +E+LI V+ + +   D   RKG +P         G E +G ++ +G+NV  WK+GD              + C          A L G    G + +     A Q   +P+G  L + A       TV+  +  T+ L+ G+   + G   G+G+ A+Q  +  G+RV    G +EK    K LGA+  +++ K +D V  VK+ T G
Sbjct:    8 TQKAVVFDTNGGQLVYKDYPVPTP--KPNELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNCGEADLSGYTHDGSFEQYATADAVQAAKIPAGTDLANVAPILCAGVTVYKAL-KTADLAAGQWVAISGAGGGLGSLAVQYARAMGLRVVAIDGGDEKGEFVKSLGAEAYVDFTKDKDIVEAVKKATDG 240          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: YDJL_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjL OS=Escherichia coli (strain K12) GN=ydjL PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 69/247 (27.94%), Postives = 113/247 (45.75%), Query Frame = 3
Query:   72 EVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYP---GLECSGTILSVGKNVSRWKVGDQV--------CAL-----------------LG------GGGYAEKVAVPAGQVLPV--------PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 674
            +V  P    ++V+I+++A A+  AD       Y    G+  +    G E +G I  VG+ V  WKVG +V        C +                 LG      GGG+++   VP G++L +        P GV  +DAA    + C  + ++   S   PG+  +V G +  +G F++QM +  G    V  G +E +AV     K+LGA   +N  TED VAR ++  G   + ++++C GA+
Sbjct:   18 DVPQPMCGPEDVVIEIKAAAICGADMKH----YNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVGQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVP-GEILKIHRHALWEIPDGVDYEDAAVLDPI-CNAYKSIAQQSKFLPGQDVVVIG-TGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQICGKDNLGLVIECSGAN 257          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS41_DICDI (Probable polyketide synthase 41 OS=Dictyostelium discoideum GN=pks41 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 63/222 (28.38%), Postives = 107/222 (48.20%), Query Frame = 3
Query:   90 IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEEKLAVCKDLGADV---CINYKTEDFVARVKEET------GGKGVDVILDCMGAS-YFQRNLDSLNIDGRL 719
            +K++EV IKV +T LN  D L   G     +   P  G+E SG I  +      +KVGD V  + G    +  +      +   PS +S  +A++ P V  T + +++    L   E+ L+H  + G+G   +++ K +G    +FVT GS EK    ++   D+     + + ++FV ++K +       G  GVD IL+ + +S Y   N   LN+ GR+
Sbjct: 1836 LKENEVEIKVMSTGLNYKDYLIYAGLV---ESVEPIFGIEFSGIITRISTGSKEFKVGDHVYGI-GKSTTSSHIITDIDVISHKPSNISHSEASSIPVVYLTSYHSLYNIGALKNNETILIHSATGGVGLSTLEILKWKGHSGLIFVTVGSNEKEEYLRENYGDMISGIYSTRNKNFVKQIKSKISKLNPFGKSGVDFILNTLSSSDYMDSNFKCLNMSGRI 2053          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 64/236 (27.12%), Postives = 98/236 (41.53%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQV----------------------CALLGGGGYA------EKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-TEDFVARVKEETGG 635
            T KA+V    G P  L  +++  P  K +E+LI V+ + +   D    KG +P         G E +G ++ +G NV+ W++GD                        CA     GY       +     A Q   +P G  L  AA       TV+  +  T+ + PG    + G   G+G+ AIQ  K  G RV    G EEK    K LGA+  +++  ++D V  ++  T G
Sbjct:    6 TQKAVVFESNGGP--LLYKDIPVPTPKPNEILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAKADLSGYTHDGSFQQYATADAVQAARLPKGTDLAQAAPILCAGITVYKAL-KTAQIQPGNWVCISGAGGGLGSLAIQYAKAMGFRVIAIDGGEEKGEFVKSLGAEAYVDFTVSKDIVKDIQTATDG 238          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS3_DICDI (Probable polyketide synthase 3 OS=Dictyostelium discoideum GN=pks3 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 69/227 (30.40%), Postives = 112/227 (49.34%), Query Frame = 3
Query:  102 EVLIKVEATALNRADTLQRKGSYPPPKGA-------SPYPGLECSGTILSVGKN-VSRWKVGDQVCALLGGGGY---AEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD-LGADVCINYKTED--FVARVKEE-----TGGKGVDVILDCMGASYFQRNLDSLNIDGRL 719
            EV +++++ ALN  D L   GS PP            P  G + SG I  V KN  S +KVGDQV     G  Y   + K  + +G +   P+ +S + A+  P V  T   +++   +L   ES L+H  S G+G  ++ + K +G    +F+T GS EK    +D  G+ +   Y T D  +V ++K++     +   GVD+IL+ + + Y   N + L+  GR+
Sbjct: 1715 EVQVEIKSFALNYKDYLTYIGSVPPEMVNHKTGDINDPEFGSDFSGVITRVSKNNCSEFKVGDQVY----GTAYNTASSKSIIDSGSIYFKPNNLSHEQASTIPVVYSTSLHSIYNIGNLKNYESILIHSASGGVGLSSLNILKWKGHCSYIFLTVGSPEKEKYLRDTYGSLITGIYSTRDKSYVQKIKDKLKELGSDKTGVDLILNTLSSDYMDSNFNCLSKSGRI 1937          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: INC11_TRIAT (Protein indc11 OS=Trichoderma atroviride GN=indc11 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 66/228 (28.95%), Postives = 99/228 (43.42%), Query Frame = 3
Query:   21 KAIVITQPGSPEV-LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSL 701
            + +VIT  G P   LQ    + P    D V +K+       AD   R G YP        PG   +G +   G    +++ G  V AL      AE + +P   +L +P GV  K AAA P    T +  V   + +S G+   +HG S  +G   + +   QG  V+ TA SE   A  K+ GA   + Y  +D++A +K+     GV  + D +G   F  +   L
Sbjct:    6 RKVVITAYGPPSTALQFVTEDLPPPPKDHVQVKILYAGFAGADVNMRLGVYPMQSAPPFTPGYCFAGRVSVNGPGSGKFEPGTLVTALTKYDSDAEYINIPEKYLLAIPDGVDPKVAAALPVDWSTAYGMVHRAAKVSEGQRVFIHGISGAVGQAVMYLSLLQGATVYGTA-SERNHAALKEAGAHPYL-YTNKDWIAAMKDL---GGVHAVFDALGFESFDESYSIL 228          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: FAS_HUMAN (Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 64/207 (30.92%), Postives = 92/207 (44.44%), Query Frame = 3
Query:  108 LIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLDSLNIDGR 716
            L  V   +LN  D +   G   P       PG   S   L   +   R   G +V  L+   G A  V +    +  VPS  +L++AA+ P V  T +  + +   + PGE+ L+H GS G+G  AI +    G RVF T GS EK A  +     L +    N +   F   V   TGGKGVD++L+ +     Q ++  L   GR
Sbjct: 1563 LCTVYYASLNFRDIMLATGKLSP----DAIPGKWTSQDSLLGMEFSGRDASGKRVMGLVPAKGLATSVLLSPDFLWDVPSNWTLEEAASVPVVYSTAYYALVVRGRVRPGETLLIHSGSGGVGQAAIAIALSLGCRVFTTVGSAEKRAYLQARFPQLDSTSFANSRDTSFEQHVLWHTGGKGVDLVLNSLAEEKLQASVRCLATHGR 1765          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: ADH1_KLULA (Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 65/242 (26.86%), Postives = 108/242 (44.63%), Query Frame = 3
Query:   15 TMKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD--------------QVCAL----------LGG----GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETGGKGVDVI 653
            T K ++  + G    LQ +++  P+ K +E+LI V+ + +   D    KG +P P       G E +G ++++G+NV  WK+GD              + C L          L G    G + +     A Q   +P G  L + A       TV+  +  +++L  G+   + G + G+G+ A+Q  K  G RV      EEK  + KDLG +  I++ K+++    V E T G    VI
Sbjct:    8 TQKGVIFYENGGE--LQYKDIPVPKPKANELLINVKYSGVCHTDLHAWKGDWPLPTKLPLVGGHEGAGVVVAMGENVKGWKIGDFAGIKWLNGSCMSCEYCELSNESNCPEADLSGYTHDGSFQQYATADAVQAAKIPVGTDLAEVAPVLCAGVTVYKAL-KSANLKAGDWVAISGAAGGLGSLAVQYAKAMGYRVLGIDAGEEKAKLFKDLGGEYFIDFTKSKNIPEEVIEATKGGAHGVI 246          
BLAST of FC931140 vs. ExPASy Swiss-Prot
Match: PKS42_DICDI (Probable polyketide synthase 42 OS=Dictyostelium discoideum GN=pks42 PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15
Identity = 57/187 (30.48%), Postives = 94/187 (50.27%), Query Frame = 3
Query:  192 PYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR--VFVTAGSEEKLAVCKD-LGADVCINY--KTEDFVARVKE-------ETGGKGVDVILDCMGASYFQRNLDSLNIDGR 716
            P  G + SG I  +G +V ++KVGD+VC L      A  +    G +   PS +S  +AA+   V  T + +++    L   E+ L+H GS GIG  A+++ K +  +  +F T GSE+K+    D  G+ +   Y  + +D+  ++KE       +   +GVD+IL+ +   Y   N   LN  GR
Sbjct: 1935 PSIGNDFSGVITRIGSDVRKFKVGDEVCGLAPKTS-ASHIITEEGYLCKKPSNISHSEAASSVTVYTTSFQSIYSIGDLKKNETILIHSGSGGIGLSALEILKWKNHQGYIFATVGSEDKVKYLTDTYGSFITGIYSSRDKDYQDQIKEKLKSLGCDIDHQGVDLILNTLSVEYMDSNFKCLNQKGR 2120          
The following BLAST results are available for this feature:
BLAST of FC931140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
ADH1_KLUMA4.125e-1626.86Alcohol dehydrogenase 1 OS=Kluyveromyces marxianus... [more]
ADH1_CANAL4.125e-1627.97Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]
YDJL_ECOLI5.388e-1627.94Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
PKS41_DICDI5.388e-1628.38Probable polyketide synthase 41 OS=Dictyostelium d... [more]
ADH1_PICST5.388e-1627.12Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
PKS3_DICDI7.037e-1630.40Probable polyketide synthase 3 OS=Dictyostelium di... [more]
INC11_TRIAT7.037e-1628.95Protein indc11 OS=Trichoderma atroviride GN=indc11... [more]
FAS_HUMAN7.037e-1630.92Fatty acid synthase OS=Homo sapiens GN=FASN PE=1 S... [more]
ADH1_KLULA7.037e-1626.86Alcohol dehydrogenase 1 OS=Kluyveromyces lactis GN... [more]
PKS42_DICDI1.200e-1530.48Probable polyketide synthase 42 OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionC34101H08EF PostHarvP1 Citrus clementina cDNA clone C34101H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931140 ID=FC931140; Name=FC931140; organism=Citrus clementina; type=EST; length=726bp
GGGAAAGTGAAGGCACAATGAAGGCAATAGTGATAACTCAACCCGGTAGC
CCAGAAGTGCTGCAGTTGCAAGAAGTAGAAGACCCTCAAATCAAAGACGA
CGAAGTGTTGATCAAAGTCGAAGCTACTGCCCTGAACCGGGCCGACACTC
TTCAACGAAAAGGCTCCTACCCTCCACCCAAAGGCGCCAGCCCTTACCCG
GGTCTCGAATGTTCCGGAACCATCCTGTCCGTTGGTAAAAACGTCTCTAG
ATGGAAAGTCGGCGACCAGGTGTGTGCTCTGCTTGGTGGAGGAGGGTATG
CTGAGAAAGTGGCTGTTCCAGCTGGACAAGTTCTTCCCGTTCCATCTGGT
GTCTCACTCAAAGATGCTGCTGCGTTTCCGGAGGTGGCTTGCACTGTTTG
GTCAACGGTTTTCATGACCAGTCACCTATCCCCAGGGGAGTCATTTCTGG
TTCATGGGGGCTCTAGTGGAATTGGTACATTTGCGATTCAGATGGGAAAA
TGCCAAGGAGTGAGAGTCTTTGTTACAGCAGGAAGTGAGGAAAAGCTGGC
TGTTTGCAAGGATCTTGGTGCGGATGTGTGCATCAATTACAAGACTGAGG
ATTTTGTTGCACGAGTGAAGGAAGAAACTGGTGGTAAAGGTGTTGATGTA
ATTCTAGATTGCATGGGAGCATCCTACTTTCAGCGTAACCTCGACAGCTT
GAACATTGATGGGAGGCTTTTCATAA
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