FC931159

Overview
NameFC931159
Unique NameFC931159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15352 contig Ccv1_Contig15352:174..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: ATOB_PSEAE (Acetyl-CoA acetyltransferase OS=Pseudomonas aeruginosa GN=atoB PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.552e-51
Identity = 108/235 (45.96%), Postives = 150/235 (63.83%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            +G F G+L+ + A +LG+  I   L++  +D   V EV  G VL+A  GQ PARQAA+ AG+P  V   T+NKVC SGLKA+ L +Q+I+ G  +VIVAGG E+MS AP  +  AR G R+GH  LVD M++DGLWD +ND  MG  AE  AE++ +TRE QD FA  S ++ IAA + G F  EI P++V   +G+P      ++         L KL+P+F+++ G+VTAGNA
Sbjct:   14 VGSFQGSLAGIPAPELGAAVIRRLLEQTGLDAGQVDEVILGQVLTAGSGQNPARQAAIKAGLPVGVPAMTLNKVCGSGLKALHLGAQAIRCGDAEVIVAGGQENMSLAPYVMPGARTGLRMGHAKLVDSMIEDGLWDAFNDYHMGITAENLAEKYGLTREEQDAFAAASQQKAIAAIEGGRFRDEITPIQVPQRKGEPLGFDTDEQPRAGTTVEALAKLKPAFRKD-GSVTAGNA 247          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_RALEH (Acetyl-CoA acetyltransferase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbA PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.118e-50
Identity = 113/235 (48.09%), Postives = 148/235 (62.98%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            +G F G+L+ + A +LG++ I+AAL+RA V P  V EV  G VL+A  GQ PARQAA+ AG+P  V   T+NKVC SGLKA+MLA+ +I  G  +++VAGG E+MS AP  L  +R G R+G   LVD M+ DGLWDVYN   MG  AE  A+++ ITRE QD+FAV S  +  AAQ AG F  EIVPV +   +G P      +          +  L+P+F +  GTVTA NA
Sbjct:   14 VGKFGGSLAKIPAPELGAVVIKAALERAGVKPEQVSEVIMGQVLTAGSGQNPARQAAIKAGLPAMVPAMTINKVCGSGLKAVMLAANAIMAGDAEIVVAGGQENMSAAPHVLPGSRDGFRMGDAKLVDTMIVDGLWDVYNQYHMGITAENVAKEYGITREAQDEFAVGSQNKAEAAQKAGKFDEEIVPVLIPQRKGDPVAFKTDEFVRQGATLDSMSGLKPAF-DKAGTVTAANA 247          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THLA_CLOD6 (Acetyl-CoA acetyltransferase OS=Clostridium difficile (strain 630) GN=thlA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.460e-50
Identity = 114/236 (48.31%), Postives = 152/236 (64.41%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGK-FDPAKLRKLRPSFKENGGTVTAGNA 709
            +G F G   S+SA +LG  A + A+KRAN+ P ++ E   G VL+A LGQ  ARQ ALGAGIP      T+N VC SGL+++ +ASQ I LG  D+++ GG E+MS +P  +  AR G+R+G  + VD M+KDGL D++N+  MG  AE  AEQ +ITRE QD+ A+ S  +   AQ  G F  EIVPV +   +G   T+VDKDE +       KL KLRP+FK++ GTVTAGNA
Sbjct:   14 VGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMIKDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKG--DTVVDKDEYIKPGTTMEKLAKLRPAFKKD-GTVTAGNA 246          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THLA_CLOAB (Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum GN=thlA PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 7.245e-50
Identity = 113/237 (47.68%), Postives = 153/237 (64.56%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPA--KLRKLRPSFKENGGTVTAGNA 709
            +G +  +L  + A  LG+ AI+ A+K+A + P  V EV  GNVL A LGQ PARQA+  AG+P  +   T+NKVC SGL+ + LA+Q I+ G  DVI+AGGME+MS AP     AR G R+G+   VD M+ DGLWD +ND  MG  AE  AE+ +I+RE QD+FA+ S ++   A  +G F  EIVPV +   +G+  T+VD DE   +F      L KL+P+FK++ GTVTAGNA
Sbjct:   14 IGSYGKSLKDVPAVDLGATAIKEAVKKAGIKPEDVNEVILGNVLQAGLGQNPARQASFKAGLPVEIPAMTINKVCGSGLRTVSLAAQIIKAGDADVIIAGGMENMSRAPYLANNARWGYRMGNAKFVDEMITDGLWDAFNDYHMGITAENIAERWNISREEQDEFALASQKKAEEAIKSGQFKDEIVPVVIKGRKGE--TVVDTDEH-PRFGSTIEGLAKLKPAFKKD-GTVTAGNA 246          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: YQEF_ECOLI (Probable acetyl-CoA acetyltransferase OS=Escherichia coli (strain K12) GN=yqeF PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 1.236e-49
Identity = 110/237 (46.41%), Postives = 157/237 (66.24%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            P+G F G L+  SA +LGS+ ++A ++R  V    V EV  G VL+A  GQ PARQ+A+  G+PNSV   T+N VC SGLKA+ LA+Q+IQ G  D+++AGG E+MS AP  L ++R G++LG+  LVD ++ DGLWD +ND  +G  AE  A ++ I+R+ QD +A+ S ++  AA DAG F  EIVPV ++   G+ + +VD DE       A+ L +L PSF ++ G+VTAGNA
Sbjct:   13 PIGCFRGALAGHSAVELGSLVVKALIERTGVPAYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAIQCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVTAENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPV-MTQSNGQ-TLVVDTDEQPRTDASAEGLARLNPSF-DSLGSVTAGNA 246          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_THIVI (Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.010e-49
Identity = 106/236 (44.92%), Postives = 149/236 (63.14%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            +G F G LS+L AT +G+  ++A ++R  + P  V EV  G VL+A  GQ PARQ  L AG+P++V   T+NKVC SGLKA+ LA Q++  G  ++++AGG ESMS +   L  +R+G R+G   + D M+ DGLWD +N C MG  AE  A++++ TRE QD FA  S ++  AA  +G FA EI+PV +   +G P  + D DE       A+ L +LRP+F +  GTVTAGNA
Sbjct:   15 IGTFGGALSALQATDIGTTVLKALIERTGIAPEQVSEVILGQVLTAGCGQNPARQTTLMAGLPHTVPAMTINKVCGSGLKAVHLAMQAVACGDAEIVIAGGQESMSQSSHVLPRSREGQRMGDWPMKDTMIVDGLWDAFNQCHMGVTAENIAKKYAFTREAQDAFAAASQQKAEAAIQSGRFADEIIPVSIPQRKGDP-LVFDTDEFPRPGTTAETLGRLRPAF-DKQGTVTAGNA 248          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_PARDE (Acetyl-CoA acetyltransferase OS=Paracoccus denitrificans GN=phaA PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.046e-48
Identity = 108/237 (45.57%), Postives = 151/237 (63.71%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            P+G FLG+ ++L A +LG+I ++A ++RA +DPS V E   G VL+A  GQ PARQA +  G+P       +N+VC SGL+ + LA+Q + LG   ++VAGG ESMS AP + A    G ++G   ++D M+KDGLWD +ND  MGT AE  A +  I+R  QD FAV S  +  AAQ AG FA EIVPV + + +G+  T+VD DE +      + +  +RP+F +  GTVTAGNA
Sbjct:   13 PVGSFLGSFANLPAHELGAIVLKAVVERAGIDPSEVSETILGQVLTAAQGQNPARQAHIKVGLPRESAAWVINQVCGSGLRTVALAAQQVLLGDARIVVAGGQESMSLAP-HAAYIAPGQKMGDMKMLDTMIKDGLWDAFNDYHMGTTAENVAGKWEISRAEQDQFAVASQNKAEAAQKAGKFADEIVPVTIKSRKGE--TVVDADEYIRHGATLEAMENVRPAFSKE-GTVTAGNA 245          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: ATOB_HAEIN (Acetyl-CoA acetyltransferase OS=Haemophilus influenzae GN=atoB PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.046e-48
Identity = 118/239 (49.37%), Postives = 153/239 (64.02%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYL-AEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK--LRKLRPSFKENGGTVTAGNA 709
            P+G F G LSS+SA  LG+I I+ A+KRAN++ +LV EV  GNVL A LGQ PARQAAL AGI   +   T+NKVC SGLK++ L +QSI  G  D++V GGME+MS AP  L ++ R+G ++G+ +L D M++DGL    N   MG  AE  AEQ+ I+R+ QD+ A+ S      A   G F  EIVPV V   +G    IV +DE   K D     L KL+P+FK+  GTVTAGNA
Sbjct:   13 PIGSFNGALSSVSAVDLGAIVIQEAIKRANIESALVNEVIMGNVLQAGLGQNPARQAALKAGIEKEIPSLTINKVCGSGLKSVALGAQSIISGDADIVVVGGMENMSQAPYLLDSKVRQGVKMGNLTLRDTMIEDGLTCASNHYHMGITAENIAEQYGISRQAQDELALRSQTLASQAVQLGVFDKEIVPVMVKTRKG--DIIVSRDE-YPKADTTAEGLAKLKPAFKKE-GTVTAGNA 247          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_CHRVO (Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum GN=phaA PE=3 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.511e-47
Identity = 114/237 (48.10%), Postives = 150/237 (63.29%), Query Frame = 2
Query:    5 MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK--LRKLRPSFKENGGTVTAGNA 709
            +G F G L+ + A +LG+  I+A L++  V P  V EV  G VL+A  GQ PARQA + AG+P +   TT+N VC SGL+A+ LA+Q+I  G  D+++AGG ESMS +P  L  +R G R+G+  LVD M+ DGL D YN   MG  AE  A ++ I RE QD F++ S +R  AAQ AG F  EIVPV V   +G P    D DE + K D +   L KLRP+FK++ GTVTAGNA
Sbjct:   13 IGSFGGGLAKIPAPELGATVIKALLEKTGVKPEDVSEVILGQVLTAGSGQNPARQALIKAGLPVTTPATTLNVVCGSGLRAVHLAAQAILAGDADIVIAGGQESMSLSPHILPGSRDGFRMGNAQLVDTMVNDGLTDAYNAYHMGITAENVAAKYGIGREEQDAFSLQSQQRAAAAQKAGKFRDEIVPVLVPQRKGDPLAF-DADEFI-KHDASADGLAKLRPAFKKD-GTVTAGNA 246          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIL_MYCLE (Probable acetyl-CoA acetyltransferase OS=Mycobacterium leprae GN=fadA4 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.279e-46
Identity = 109/237 (45.99%), Postives = 147/237 (62.03%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            P+G  +G+L   SA+ LG+I I AALK+ANV PS+VQ V  G VL+A  GQ PARQAA+ AGI   V   T+NK+C SGL AI LA Q I+ G  DV+VAGG ESM+ AP  L ++R G + G  ++VD +  DGL DV+ +  MG   E   +    TR+ QD+FA  S ++  AA   G FA E+VPV +   +G  S    +DEG+     A+ L  L+P+F+  GGT+T G+A
Sbjct:   13 PIGKLMGSLKDFSASDLGAITIAAALKKANVAPSIVQYVIIGQVLTAGAGQMPARQAAVAAGIGWDVPALTINKMCLSGLDAIALADQLIRAGEFDVVVAGGQESMTKAPHLLMDSRSGYKYGDVTIVDHLAYDGLHDVFTNQPMGALTEQRNDVEKFTRQEQDEFAARSHQKAAAAWKDGVFADEVVPVSIPQSKG-DSLQFTEDEGIRANTSAESLAGLKPAFR-CGGTITPGSA 247          
The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
ATOB_PSEAE6.552e-5145.96Acetyl-CoA acetyltransferase OS=Pseudomonas aerugi... [more]
THIL_RALEH1.118e-5048.09Acetyl-CoA acetyltransferase OS=Ralstonia eutropha... [more]
THLA_CLOD61.460e-5048.31Acetyl-CoA acetyltransferase OS=Clostridium diffic... [more]
THLA_CLOAB7.245e-5047.68Acetyl-CoA acetyltransferase OS=Clostridium acetob... [more]
YQEF_ECOLI1.236e-4946.41Probable acetyl-CoA acetyltransferase OS=Escherich... [more]
THIL_THIVI8.010e-4944.92Acetyl-CoA acetyltransferase OS=Thiocystis violace... [more]
THIL_PARDE1.046e-4845.57Acetyl-CoA acetyltransferase OS=Paracoccus denitri... [more]
ATOB_HAEIN1.046e-4849.37Acetyl-CoA acetyltransferase OS=Haemophilus influe... [more]
THIL_CHRVO1.511e-4748.10Acetyl-CoA acetyltransferase OS=Chromobacterium vi... [more]
THIL_MYCLE1.279e-4645.99Probable acetyl-CoA acetyltransferase OS=Mycobacte... [more]

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Properties
Property NameValue
Genbank descriptionC34102B03EF PostHarvP1 Citrus clementina cDNA clone C34102B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bp
ACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCAAGC
TTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGATCCA
TCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCTAGG
ACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATTCAG
TGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCTATA
ATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGTGGC
TGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAGCGA
GAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTTAAA
GATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGCTGA
ACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACTTTG
CTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCCTTT
GCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACCATC
AACCATTGTTGATAAGGATGAAGGTTTAGGCAAGTTTGACCCGGCAAAAT
TGAGGAAGCTTCGACCAAGTTTCAAGGAGAATGGAGGAACTGTTACGGCT
GGCAATGCC
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