FC931159

Overview
NameFC931159
Unique NameFC931159
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15352 contig Ccv1_Contig15352:174..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIM_PONAB (3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.216e-32
Identity = 89/237 (37.55%), Postives = 126/237 (53.16%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P G + G L   +AT L   A +AAL    V P  V  V  GNVL ++      AR   L  GIP      T+N++C SG ++I+   Q I +   +V++ GG ESMS AP  +   R G++LG D  ++  L   L D +    +   AE  A +H I+RE  D +A+ S +R  AA DAG F  E+ P+EV   +GK +  VD +    +    +L+KL P FK++ GTVTAGNA
Sbjct:   16 PFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRTVRFGTKLGSDIKLEDSLWVSLTDQHVQLPIAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVD-EHARPQTTLEQLQKLPPVFKKD-GTVTAGNA 250          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIM_BOVIN (3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.381e-31
Identity = 87/237 (36.71%), Postives = 123/237 (51.90%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P G + G L   + T +   A  AAL    V P  V  V  GNV+ ++      AR   L  GIP      T+N++C SG ++I+   Q I    ++V++ GG ESMS AP  +   R G++LG +  ++  L  GL D +    M   AE  A +H I+RE+ D +A+ S +R   A DAG F  E+ PVEV   +GK +  VD +    +    +L KL P FK+  GTVTAGNA
Sbjct:   16 PFGAYGGLLKDFTPTDMAEFAARAALSAGRVSPETVDSVVVGNVMQSSSDAIYLARHVGLRVGIPKETPAITINRLCGSGFQSIVSGCQEICSRDSEVVLCGGTESMSQAPYCVRNIRFGTKLGSELKLEDTLWTGLTDTHVQMPMAITAENLAVKHQISREDCDRYALQSQQRWKTANDAGYFDNEMAPVEVKTRKGKQTMQVD-EHPRPQTTMEQLNKLPPVFKKE-GTVTAGNA 250          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIM_MOUSE (3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus GN=Acaa2 PE=1 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 1.678e-30
Identity = 86/237 (36.29%), Postives = 127/237 (53.59%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P G + G L   SAT L   A  AAL    V P  +  V  GNV+ ++   A  AR   L  G+P      T+N++C SG ++I+   Q I     +V++ GG ESMS +P  +   R G++ G D  ++  L  GL D +    MG  AE  A +++I+RE+ D +A+ S +R  AA +AG F  E+ P+EV   +GK +  VD +    +    +L+KL   FK++ GTVTAGNA
Sbjct:   16 PFGAYGGLLKDFSATDLTEFAARAALSAGKVPPETIDSVIVGNVMQSSSDAAYLARHVGLRVGVPTETGALTLNRLCGSGFQSIVSGCQEICSKDAEVVLCGGTESMSQSPYCVRNVRFGTKFGLDLKLEDTLWAGLTDQHVKLPMGMTAENLAAKYNISREDCDRYALQSQQRWKAANEAGYFNEEMAPIEVKTKKGKQTMQVD-EHARPQTTLEQLQKLPSVFKKD-GTVTAGNA 250          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIM_RAT (3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus GN=Acaa2 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.191e-30
Identity = 85/237 (35.86%), Postives = 126/237 (53.16%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P G + G L   +AT L   A  AAL    V P  +  V  GNV+ ++   A  AR   L  G+P      T+N++C SG ++I+   Q I     +V++ GG ESMS +P  +   R G++ G D  ++  L  GL D +    MG  AE  A +++I+RE+ D +A+ S +R  AA +AG F  E+ P+EV   +GK +  VD +    +    +L+ L P FK+  GTVTAGNA
Sbjct:   16 PFGAYGGLLKDFTATDLTEFAARAALSAGKVPPETIDSVIVGNVMQSSSDAAYLARHVGLRVGVPTETGALTLNRLCGSGFQSIVSGCQEICSKDAEVVLCGGTESMSQSPYSVRNVRFGTKFGLDLKLEDTLWAGLTDQHVKLPMGMTAENLAAKYNISREDCDRYALQSQQRWKAANEAGYFNEEMAPIEVKTKKGKQTMQVD-EHARPQTTLEQLQNLPPVFKKE-GTVTAGNA 250          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: CATF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=catF PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.868e-27
Identity = 87/242 (35.95%), Postives = 131/242 (54.13%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEAR----KGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P G + G L+++ A  LG+I I A ++R  +V+ + V +V +G    A    +   R +AL AG+P  V  TTVN++C S L AI +A+++I+ G   +I+AGG+ESMS AP  + ++     +  ++   ++    +   L  +Y   +M   AE  AEQ  I RE+QD FA  S +R  AAQ  G FA EIVPV +   +G+P  I   +          L KL+   K   G+VTAGNA
Sbjct:   13 PFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVTIPQRKGEPVVIATDEHPRASTTLEGLAKLKGVVKPE-GSVTAGNA 253          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: PCAF_ACIAD (Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=pcaF PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27
Identity = 87/242 (35.95%), Postives = 131/242 (54.13%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEAR----KGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P G + G L+++ A  LG+I I A ++R  +V+ + V +V +G    A    +   R +AL AG+P  V  TTVN++C S L AI +A+++I+ G   +I+AGG+ESMS AP  + ++     +  ++   ++    +   L  +Y   +M   AE  AEQ  I RE+QD FA  S +R  AAQ  G FA EIVPV +   +G+P  I   +          L KL+   K   G+VTAGNA
Sbjct:   13 PFGRYAGGLAAVRADDLGAIPIAALIERNPSVNWAQVDDVIYGCANQAGEDNRNVGRMSALLAGLPVEVPATTVNRLCGSSLDAIAMAARAIKAGEAHLIIAGGVESMSRAPYVMGKSEGAFGRTQKIEDTTMGWRFINPKLKAMYGVDTMPQTAENVAEQFGIQREDQDQFAYTSQQRTAAAQAKGYFAKEIVPVTIPQRKGEPVVIDTDEHPRASTTLEGLAKLKGVVKPE-GSVTAGNA 253          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: PCAF_PSEPU (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26
Identity = 90/245 (36.73%), Postives = 136/245 (55.51%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALK-RANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKG----SRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENG--GTVTAGNA 709
            P+G F G L+ + A  L ++ ++A ++    V    V EVFFG    A    +  AR A L AG+P S+   T+N++CASG+ AI  A ++I  G  ++ +AGG+ESMS AP  + +A  G     +L   ++    +   +   Y   SM   A+  A+ + ++R +QD FA+ S ++  AAQ AG FA EIVPV ++  +G+  TIV++DE L      + L KL+P    NG   TVTAGNA
Sbjct:   13 PIGRFGGALAGVRADDLAAVPLKALIEPNPAVQWDQVDEVFFGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTAFRAIASGEMELAIAGGVESMSRAPFVMGKAESGYSRNMKLEDTTIGWRFINPLMKSQYGVDSMPETADNVADDYQVSRADQDAFALRSQQKAAAAQAAGFFAEEIVPVRIAHKKGE--TIVERDEHLRPETTLEALTKLKP---VNGPDKTVTAGNA 252          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: THIKA_CANTR (3-ketoacyl-CoA thiolase A, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.244e-25
Identity = 88/238 (36.97%), Postives = 124/238 (52.10%), Query Frame = 2
Query:   11 GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPST----IVDKDEGLGKFDPAK-LRKLRPSFKENGGTVTAGNA 709
            GF G+  S+ +  + +  ++  +K+ N+DPSL+++V  GNVL+   G    R A L AGIP +     VN+ C+SGL AI   +  I+ G  +  +AGG ESMS   +   + R   R+      D  ++  L        MG   E  A Q +I+RE QD+FA  S+ +   A  AGAF  EI+P+  S  R    T    IVD DEG  +   A+ L KLRP+F    GT TAGNA
Sbjct:   40 GFKGSFRSVRSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYR---DPRVAPRIDPHLADDAQMEKCL------IPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVAAGAFKSEILPIR-SIIRNSDGTEKEIIVDTDEGPREGVTAESLGKLRPAF---DGTTTAGNA 264          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLI (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.625e-25
Identity = 86/242 (35.54%), Postives = 130/242 (53.72%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAI-EAALKRANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKG-SRLGH--DSLVDGMLKDGLW-DVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAKLRKLRPSFKENGGTVTAGNA 709
            P+G + G LSS+ A  L +I + E  ++   +D   + +V  G    A    +  AR A L AG+P SV  TT+N++C SGL A+  A+++I+ G  D+++AGG+ESMS AP  + +A    SR     D+ +     + L    +   SM   AE  AE   I+RE+QD FA+ S +R   AQ +G  A EIVPV +   +G  + I   +    +    +LR L+  F+ N G +TAGNA
Sbjct:   13 PIGRYGGALSSVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKAASAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKGVVTEIQHDEHLRPETTLEQLRGLKAPFRAN-GVITAGNA 253          
BLAST of FC931159 vs. ExPASy Swiss-Prot
Match: PCAF_PSESB (Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13) GN=pcaF PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.729e-25
Identity = 87/245 (35.51%), Postives = 139/245 (56.73%), Query Frame = 2
Query:    2 PMGGFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEA----RKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDEGLGKFDPAK-LRKLRPSFKENG--GTVTAGNA 709
            P+G F G+L+++ A  L ++ ++A ++R   VD S + EV+ G    A    +  AR A L AG+P+SV   T+N++CASG+ A+  A ++I  G  ++++AGG+ESMS AP  + +A     +G ++   ++    +   +   Y   +M   A+  A+ + ++R +QD FA+ S +    AQ AG FA EIVPV +   +G+  T+VD DE L      + L KL+P    NG   TVTAGNA
Sbjct:   14 PIGRFGGSLAAVRADDLAAVPVKALVERNPQVDWSQLDEVYLGCANQAGEDNRNVARMALLLAGLPDSVPGVTLNRLCASGMDAVGTAFRAIASGEAELVIAGGVESMSRAPYVMGKADSAFGRGQKIEDTTIGWRFINPLMKAQYGVDAMPETADNVADDYKVSRADQDAFALRSQQLAGRAQAAGYFAEEIVPVVIKGKKGE--TVVDADEHLRPDTTLEALAKLKP---VNGPDKTVTAGNA 253          
The following BLAST results are available for this feature:
BLAST of FC931159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 280
Match NameE-valueIdentityDescription
THIM_PONAB5.216e-3237.553-ketoacyl-CoA thiolase, mitochondrial OS=Pongo ab... [more]
THIM_BOVIN3.381e-3136.713-ketoacyl-CoA thiolase, mitochondrial OS=Bos taur... [more]
THIM_MOUSE1.678e-3036.293-ketoacyl-CoA thiolase, mitochondrial OS=Mus musc... [more]
THIM_RAT2.191e-3035.863-ketoacyl-CoA thiolase, mitochondrial OS=Rattus n... [more]
CATF_ACIAD3.868e-2735.95Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
PCAF_ACIAD8.617e-2735.95Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. ... [more]
PCAF_PSEPU9.528e-2636.73Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida... [more]
THIKA_CANTR1.244e-2536.973-ketoacyl-CoA thiolase A, peroxisomal OS=Candida ... [more]
PAAJ_ECOLI1.625e-2535.54Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (... [more]
PCAF_PSESB4.729e-2535.51Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC34102B03EF PostHarvP1 Citrus clementina cDNA clone C34102B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931159 ID=FC931159; Name=FC931159; organism=Citrus clementina; type=EST; length=709bp
ACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCAAGC
TTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGATCCA
TCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCTAGG
ACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATTCAG
TGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCTATA
ATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGTGGC
TGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAGCGA
GAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTTAAA
GATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGCTGA
ACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACTTTG
CTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCCTTT
GCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACCATC
AACCATTGTTGATAAGGATGAAGGTTTAGGCAAGTTTGACCCGGCAAAAT
TGAGGAAGCTTCGACCAAGTTTCAAGGAGAATGGAGGAACTGTTACGGCT
GGCAATGCC
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