FC931160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACO11_TRINI (Acyl-CoA Delta(11) desaturase OS=Trichoplusia ni GN=D11DS PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 402 HLLALFAPF-CFT---WSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 HL AL+ + CFT W +L +F L+ ++ + GIT HR +H++FK LE + + Q I W HR HH++ D++ DPH+ GF++SH+ WL Sbjct: 48 HLAALYGLYLCFTSAKWETLLFSFVLFHMSNI-GITAGAHRLWTHKTFKAKLPLEIVLMIFNSLAFQNTAITWAREHRLHHKYSDTDADPHNASRGFFYSHVGWL 151
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD_SHEEP (Acyl-CoA desaturase OS=Ovis aries GN=SCD PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 399 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +HL AL+ P C ++ L V F Y V LGIT HR SHR++K L + Q + +W HR HH+F +++ DPH+ GF+FSH+ WL Sbjct: 82 LHLGALYGITLIPTCKIYTFLWVLF--YYVISALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWL 185
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD_CAPHI (Acyl-CoA desaturase OS=Capra hircus GN=SCD PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = 3 Query: 399 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +HL AL+ P C ++ L V F Y + LGIT HR SHR++K L + Q + +W HR HH+F +++ DPH+ GF+FSH+ WL Sbjct: 82 LHLGALYGITLIPTCKIYTFLWVLF--YYMMSALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWL 185
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD_BOVIN (Acyl-CoA desaturase OS=Bos taurus GN=SCD PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 3 Query: 399 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +HL AL+ P C ++ + V F Y + G LGIT HR SHR++K L + Q + +W HR HH+F +++ DPH+ GF+FSH+ WL Sbjct: 82 LHLGALYGITLIPTCKIYTYIWVLF--YYLMGALGITAGAHRLWSHRTYKARLPLRVFLIIGNTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWL 185
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD1_MOUSE (Acyl-CoA desaturase 1 OS=Mus musculus GN=Scd1 PE=2 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12 Identity = 38/111 (34.23%), Postives = 58/111 (52.25%), Query Frame = 3 Query: 387 VVLAMHLLALFA----PFCFTWSSLRVAFGL-YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +++ +HL L+ P C ++ L FG+ Y +T LGIT HR SHR++K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL Sbjct: 74 LMVLLHLGGLYGIILVPSCKLYTCL---FGIFYYMTSALGITAGAHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWL 181
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD_CYPCA (Acyl-CoA desaturase OS=Cyprinus carpio PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12 Identity = 38/108 (35.19%), Postives = 57/108 (52.78%), Query Frame = 3 Query: 399 MHLLALFAPFCF------TWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +HL AL+ F F TW + F ++ LGIT HR SHRS+K L+ A + Q + +W HR HH++ +++ DPH+ + GF+FSH+ WL Sbjct: 49 LHLGALYGLFLFPSARALTW----IWFFGCLLFSALGITAGAHRLWSHRSYKASLPLQIFLALGNSMAFQNDIYEWSRDHRVHHKYSETDADPHNAVRGFFFSHVGWL 152
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD2_MOUSE (Acyl-CoA desaturase 2 OS=Mus musculus GN=Scd2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12 Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 3 Query: 399 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +HL AL+ P C ++ L LY V LGIT HR SHR++K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL Sbjct: 81 LHLGALYGITLVPSCKLYTCLFAY--LYYVISALGITAGAHRLWSHRTYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWL 184
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: SCD5_BOVIN (Stearoyl-CoA desaturase 5 OS=Bos taurus GN=SCD5 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 36/104 (34.62%), Postives = 52/104 (50.00%), Query Frame = 3 Query: 396 AMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF 707 A L L+A FCF ++L G+T HR SHRS+K L A + Q + +W HR HH++ +++ DPH+ GF+FSH+ WLF Sbjct: 75 AQPLTLLWAYFCFLLTAL-------------GVTAGAHRLWSHRSYKAKLPLRIFLAAANSMAFQNDIFEWSRDHRVHHKYSETDADPHNARRGFFFSHIGWLF 165
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD2_RAT (Acyl-CoA desaturase 2 OS=Rattus norvegicus GN=Scd2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12 Identity = 37/106 (34.91%), Postives = 53/106 (50.00%), Query Frame = 3 Query: 399 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +H+ AL+ P C ++ L LY V LGIT HR SHR++K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL Sbjct: 81 LHIGALYGITLVPSCKVYTCLFAY--LYYVISALGITAGAHRLWSHRTYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWL 184
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD_HUMAN (Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.325e-11 Identity = 38/106 (35.85%), Postives = 52/106 (49.06%), Query Frame = 3 Query: 399 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +HL AL+ P C ++ L F Y LGIT HR SHRS+K L + Q + +W HR HH+F ++ DPH+ GF+FSH+ WL Sbjct: 82 LHLGALYGITLIPTCKFYTWLWGVF--YYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWL 185 The following BLAST results are available for this feature:
BLAST of FC931160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931160 ID=FC931160; Name=FC931160; organism=Citrus clementina; type=EST; length=707bpback to top |