FC931160
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: SCD5_HUMAN (Stearoyl-CoA desaturase 5 OS=Homo sapiens GN=SCD5 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 35/104 (33.65%), Postives = 52/104 (50.00%), Query Frame = 3 Query: 396 AMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLF 707 A L L+A FCF ++L G+T HR SHRS++ L A + Q + +W HR HH++ +++ DPH+ GF+FSH+ WLF Sbjct: 70 AKPLTLLWAYFCFLLAAL-------------GVTAGAHRLWSHRSYRAKLPLRIFLAVANSMAFQNDIFEWSRDHRAHHKYSETDADPHNARRGFFFSHIGWLF 160
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACOD_PIG (Acyl-CoA desaturase (Fragment) OS=Sus scrofa GN=SCD PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 36/106 (33.96%), Postives = 57/106 (53.77%), Query Frame = 3 Query: 399 MHLLALFA----PFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 +HL AL+ P C ++ L AF Y+++ + G+T HR SHR++K L + Q + +W HR HH+F +++ DPH+ GF+FSH+ WL Sbjct: 71 LHLGALYGIILIPTCKIYTLLW-AFAYYLLSAV-GVTAGAHRLWSHRTYKARLPLRVFLIIANTMAFQNDVYEWARDHRAHHKFSETDADPHNSRRGFFFSHVGWL 174
BLAST of FC931160 vs. ExPASy Swiss-Prot
Match: ACO1_YEAST (Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae GN=OLE1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.260e-11 Identity = 30/79 (37.97%), Postives = 44/79 (55.70%), Query Frame = 3 Query: 468 YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWL 704 Y G + IT +HR SHRS+ L +A G S++G+ W +HR HH++ D+ RDP+ G W+SHM W+ Sbjct: 148 YYAVGGVSITAGYHRLWSHRSYSAHWPLRLFYAIFGCASVEGSAKWWGHSHRIHHRYTDTLRDPYDARRGLWYSHMGWM 226 The following BLAST results are available for this feature:
BLAST of FC931160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931160 ID=FC931160; Name=FC931160; organism=Citrus clementina; type=EST; length=707bpback to top |