FC931169

Overview
NameFC931169
Unique NameFC931169
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 9.805e-50
Identity = 95/146 (65.07%), Postives = 120/146 (82.19%), Query Frame = 1
Query:  265 IAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +  ++    GTVIGIDLGTTYSCVGV K G VEI+ANDQG+RITPS+VAFT+ ERL+G+AAKNQAA NP  TIFD+KRLIG K++D+ VQRD+K  PYK+ N+DGKP + V+ + GE K ++PEEISAMILTKMK+ A+ +LGKK+
Sbjct:   28 VQADDVDSYGTVIGIDLGTTYSCVGVMKGGRVEILANDQGSRITPSYVAFTEDERLVGDAAKNQAANNPFNTIFDIKRLIGLKYKDESVQRDIKHFPYKVKNKDGKPVVVVETK-GEKKTYTPEEISAMILTKMKDIAQDYLGKKV 172          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 1.673e-49
Identity = 94/138 (68.12%), Postives = 117/138 (84.78%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            +   +GIDLGTTYSCV  + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQAA+NP  T+FD KRLIGRKF+D EVQ D+K  P+K+V + GKP+IQV+ + GETKVF+PEEIS+M+LTKMKETAE+++G K+
Sbjct:    1 MSKAVGIDLGTTYSCVAHFVNDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMNPANTVFDAKRLIGRKFDDPEVQNDIKHFPFKVVEKGGKPHIQVEFK-GETKVFTPEEISSMVLTKMKETAESYMGGKV 137          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP78_DEBHA (78 kDa glucose-regulated protein homolog OS=Debaryomyces hansenii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.673e-49
Identity = 97/137 (70.80%), Postives = 114/137 (83.21%), Query Frame = 1
Query:  292 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            GTVIGIDLGTTYSCVGV KNG VEI+ANDQGNRITPS+VAFT  ERLIG+AAKNQA+ N + T+FD+KRLIG K+ DK VQ+++K  PYKI  +DGKP ++V+  D ETK FSPEEIS MILTKMK  AE ++GKKI
Sbjct:   49 GTVIGIDLGTTYSCVGVMKNGKVEILANDQGNRITPSYVAFTPEERLIGDAAKNQASSNVENTVFDIKRLIGLKYNDKMVQKEIKHLPYKIDKKDGKPVVKVEFND-ETKTFSPEEISGMILTKMKSIAEEYMGKKI 184          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.184e-49
Identity = 95/134 (70.90%), Postives = 113/134 (84.33%), Query Frame = 1
Query:  301 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            IGIDLGTTYSCVG + N  VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGR+F D EVQ DMK  P+K++ +DGKP IQV+ + GETK F+PEEIS+M+L KM+E+AEAFLG K+
Sbjct:    5 IGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFK-GETKTFTPEEISSMVLLKMRESAEAFLGGKV 137          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.184e-49
Identity = 95/135 (70.37%), Postives = 113/135 (83.70%), Query Frame = 1
Query:  289 LGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLG 693
            +   +GIDLGTTYSCVGV++    EIIANDQGNR TPS+VAFTD+ERL+G+AAKNQ A+NP  T+FD KRLIGRKF D EVQ DMK  P+K+++R GKP IQV+ + GETKVF+PEEISAMIL KMKETAEA+LG
Sbjct:    1 MAPAVGIDLGTTYSCVGVFREDRCEIIANDQGNRTTPSFVAFTDTERLVGDAAKNQVAMNPANTVFDAKRLIGRKFSDPEVQADMKHFPFKVIDRGGKPVIQVEFK-GETKVFTPEEISAMILQKMKETAEAYLG 134          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 195.667 bits (496), Expect = 2.184e-49
Identity = 96/141 (68.09%), Postives = 113/141 (80.14%), Query Frame = 1
Query:  280 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            A   G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMKL P++++N  GKP + V  + GE K F PEEIS+M+LTKMKETAEAFLG  +
Sbjct:    2 AANKGMAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPFQVINEAGKPKVMVSYK-GEKKAFYPEEISSMVLTKMKETAEAFLGHNV 141          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.184e-49
Identity = 96/141 (68.09%), Postives = 114/141 (80.85%), Query Frame = 1
Query:  280 ATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            AT  G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  T+FD KRLIGRKF D  VQ DMKL P++++N  GKP + V  + GE K F PEEIS+M+LTK+KETAEAFLG  +
Sbjct:    2 ATAKGIAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYK-GENKAFYPEEISSMVLTKLKETAEAFLGHPV 141          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.184e-49
Identity = 99/163 (60.74%), Postives = 126/163 (77.30%), Query Frame = 1
Query:  217 LVVLAIVFFGGLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFT-DSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKI 702
            L  L ++    +FA S   ++   +GTV+GIDLGTTYSCVGV+KNG VEIIANDQGNRITPS+VAFT + ERLIG+AAKNQ   NP+ T+FD KRLIGR + D  VQ+D+K  P+K++ +  KPYI+V I D + K F+PEEISAM+L KMKETAEA+LG+K+
Sbjct:    6 LFALVLLVSASVFA-SDDDDKKDDIGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVIEKKTKPYIEVDIGD-QMKTFAPEEISAMVLVKMKETAEAYLGRKV 166          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.726e-49
Identity = 96/138 (69.57%), Postives = 115/138 (83.33%), Query Frame = 1
Query:  292 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 705
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRKFED  VQ DMK  P+++V+  GKP +QV+ + GE K F PEEIS+M+LTKMKE AEA+LG K++
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK-GEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQ 141          
BLAST of FC931169 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.726e-49
Identity = 96/138 (69.57%), Postives = 115/138 (83.33%), Query Frame = 1
Query:  292 GTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAAVNPDRTIFDVKRLIGRKFEDKEVQRDMKLAPYKIVNRDGKPYIQVQIRDGETKVFSPEEISAMILTKMKETAEAFLGKKIR 705
            G  IGIDLGTTYSCVGV+++G VEIIANDQGNR TPS+VAFTD+ERLIG+AAKNQ A+NP  TIFD KRLIGRKFED  VQ DMK  P+++V+  GKP +QV+ + GE K F PEEIS+M+LTKMKE AEA+LG K++
Sbjct:    5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYK-GEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQ 141          
The following BLAST results are available for this feature:
BLAST of FC931169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_YARLI9.805e-5065.0778 kDa glucose-regulated protein homolog OS=Yarrow... [more]
HSP71_PICAN1.673e-4968.12Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
GRP78_DEBHA1.673e-4970.8078 kDa glucose-regulated protein homolog OS=Debary... [more]
HSP71_SCHPO2.184e-4970.90Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP70_NEUCR2.184e-4970.37Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HS71L_MOUSE2.184e-4968.09Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HS71L_HUMAN2.184e-4968.09Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
GRP78_XENLA2.184e-4960.7478 kDa glucose-regulated protein OS=Xenopus laevis... [more]
HSP72_RAT3.726e-4969.57Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_CAPHI3.726e-4969.57Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]

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Properties
Property NameValue
Genbank descriptionC34102C01EF PostHarvP1 Citrus clementina cDNA clone C34102C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931169 ID=FC931169; Name=FC931169; organism=Citrus clementina; type=EST; length=727bp
GGTGCACCCTATTTACACGTAAACCATCGGTCTATAAAGTGCTATCATTC
ACGCGCGATATTTCACTGAAACCAGAAGGCCTTTCGAAAGCAAAAAAACA
CACTTCAAACATCGAAACCTCCTCAATTGAACGAAGCTCTCTCAGAAAGG
AGTTTGAAGCAGGGTATAATTGCTGCAGTACGCGCGATGGCTGGCTCGTG
GAGAGCACGCGGGTCCCTCGTTGTGCTGGCGATTGTCTTCTTCGGAGGTC
TTTTTGCAATTTCAATTGCAAAAGAGGAAGCTACGAAGTTGGGAACGGTG
ATTGGGATAGATCTTGGTACAACTTATTCTTGTGTTGGTGTTTACAAGAA
TGGTCATGTCGAAATCATAGCCAATGATCAAGGAAACCGTATTACTCCAT
CATGGGTTGCATTCACTGACAGTGAGAGGTTGATCGGTGAGGCAGCAAAG
AATCAGGCTGCTGTCAATCCTGACAGGACCATCTTTGATGTCAAGAGACT
TATTGGAAGAAAGTTTGAGGACAAGGAGGTTCAGAGGGACATGAAGCTTG
CTCCTTACAAGATTGTGAATAGGGATGGAAAGCCTTATATTCAGGTTCAG
ATTAGGGACGGCGAGACCAAGGTCTTCAGTCCTGAGGAAATCAGTGCTAT
GATACTGACTAAGATGAAGGAGACAGCCGAGGCATTCCTTGGGAAGAAAA
TTAGGATGCTGTTGTCACTGGTCCTGC
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